EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005022849 (Gene tree)
Gene ID: 101470896
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 9064 bases
Position: chrLG4:2009114-2018177
Accession: 101470896
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005030674	RRM_1	PF00076.22	1.5e-19	1	1
ENSMZEP00005030674	U1snRNP70_N	PF12220.8	7.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005031639	-	1861	XM_004573119	ENSMZEP00005030674	466 (aa)	XP_004573176	UPI000329E10C

Gene Model

Click here to download ENSMZEG00005022849's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005022849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005022849	snrnp70	100	87.447	ENSACIG00000017909	snrnp70	100	90.213	Amphilophus_citrinellus
ENSMZEG00005022849	snrnp70	100	79.830	ENSAPEG00000006219	snrnp70	100	83.298	Amphiprion_percula
ENSMZEG00005022849	snrnp70	100	84.615	ENSATEG00000008748	snrnp70	100	78.632	Anabas_testudineus
ENSMZEG00005022849	snrnp70	100	98.309	ENSACLG00000011144	snrnp70	100	98.309	Astatotilapia_calliptera
ENSMZEG00005022849	snrnp70	53	48.996	WBGene00004390	rnp-7	56	51.064	Caenorhabditis_elegans
ENSMZEG00005022849	snrnp70	100	69.851	ENSFHEG00000010298	snrnp70	100	71.550	Fundulus_heteroclitus
ENSMZEG00005022849	snrnp70	100	77.021	ENSGAFG00000003395	snrnp70	100	74.200	Gambusia_affinis
ENSMZEG00005022849	snrnp70	100	98.932	ENSHBUG00000018856	snrnp70	100	98.932	Haplochromis_burtoni
ENSMZEG00005022849	snrnp70	100	75.687	ENSHCOG00000010270	snrnp70	100	74.364	Hippocampus_comes
ENSMZEG00005022849	snrnp70	56	81.853	ENSMNEG00000038057	SNRNP70	52	91.928	Macaca_nemestrina
ENSMZEG00005022849	snrnp70	100	86.441	ENSMAMG00000004556	snrnp70	100	85.169	Mastacembelus_armatus
ENSMZEG00005022849	snrnp70	74	91.304	ENSMALG00000002275	snrnp70	90	85.777	Monopterus_albus
ENSMZEG00005022849	snrnp70	100	75.212	ENSORLG00000017158	snrnp70	100	80.550	Oryzias_latipes
ENSMZEG00005022849	snrnp70	100	75.636	ENSORLG00015010817	snrnp70	100	80.761	Oryzias_latipes_hsok
ENSMZEG00005022849	snrnp70	100	82.479	ENSOMEG00000013002	snrnp70	100	83.120	Oryzias_melastigma
ENSMZEG00005022849	snrnp70	100	78.465	ENSPFOG00000016671	snrnp70	100	79.957	Poecilia_formosa
ENSMZEG00005022849	snrnp70	100	78.252	ENSPLAG00000005912	snrnp70	100	79.744	Poecilia_latipinna
ENSMZEG00005022849	snrnp70	100	78.465	ENSPMEG00000008496	snrnp70	100	79.957	Poecilia_mexicana
ENSMZEG00005022849	snrnp70	100	78.252	ENSPREG00000005486	snrnp70	100	79.744	Poecilia_reticulata
ENSMZEG00005022849	snrnp70	100	99.573	ENSPNYG00000003258	snrnp70	100	99.573	Pundamilia_nyererei
ENSMZEG00005022849	snrnp70	100	74.947	ENSSMAG00000013978	snrnp70	100	77.236	Scophthalmus_maximus
ENSMZEG00005022849	snrnp70	100	79.701	ENSTRUG00000009202	snrnp70	100	73.718	Takifugu_rubripes
ENSMZEG00005022849	snrnp70	100	77.282	ENSXMAG00000012789	snrnp70	100	79.618	Xiphophorus_maculatus