EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023141 (Gene tree)
Gene ID: 101469655
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 23696 bases
Position: chrLG4:24653210-24676905
Accession: 101469655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005031038	RRM_1	PF00076.22	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005032040	-	10696	XM_004552443	ENSMZEP00005031038	2195 (aa)	XP_004552500	UPI00032A2827

Gene Model

Click here to download ENSMZEG00005023141's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023141	setd1a	82	98.010	ENSAPOG00000018002	setd1a	79	97.156	Acanthochromis_polyacanthus
ENSMZEG00005023141	setd1a	77	91.333	ENSACIG00000007144	setd1a	99	93.730	Amphilophus_citrinellus
ENSMZEG00005023141	setd1a	100	87.989	ENSAOCG00000003663	setd1a	100	88.529	Amphiprion_ocellaris
ENSMZEG00005023141	setd1a	100	86.486	ENSATEG00000022798	setd1a	100	86.132	Anabas_testudineus
ENSMZEG00005023141	setd1a	100	99.818	ENSACLG00000024747	setd1a	100	99.818	Astatotilapia_calliptera
ENSMZEG00005023141	setd1a	100	81.247	ENSCSEG00000021605	setd1a	100	80.766	Cynoglossus_semilaevis
ENSMZEG00005023141	setd1a	100	82.177	ENSCVAG00000011672	setd1a	100	81.905	Cyprinodon_variegatus
ENSMZEG00005023141	setd1a	100	60.605	ENSELUG00000020261	setd1a	72	75.455	Esox_lucius
ENSMZEG00005023141	setd1a	89	77.750	ENSFHEG00000023258	setd1a	96	97.368	Fundulus_heteroclitus
ENSMZEG00005023141	setd1a	60	91.562	ENSGAFG00000011698	setd1a	80	91.562	Gambusia_affinis
ENSMZEG00005023141	setd1a	66	87.248	ENSGACG00000013688	setd1a	83	84.921	Gasterosteus_aculeatus
ENSMZEG00005023141	setd1a	55	81.667	ENSGAGG00000010781	-	71	82.432	Gopherus_agassizii
ENSMZEG00005023141	setd1a	100	99.181	ENSHBUG00000008893	setd1a	100	99.181	Haplochromis_burtoni
ENSMZEG00005023141	setd1a	77	85.795	ENSHCOG00000003119	setd1a	100	85.795	Hippocampus_comes
ENSMZEG00005023141	setd1a	100	83.092	ENSKMAG00000009484	setd1a	100	83.958	Kryptolebias_marmoratus
ENSMZEG00005023141	setd1a	69	80.940	ENSLBEG00000004399	setd1a	100	83.475	Labrus_bergylta
ENSMZEG00005023141	setd1a	71	89.139	ENSMAMG00000021851	setd1a	98	89.139	Mastacembelus_armatus
ENSMZEG00005023141	setd1a	52	82.095	ENSMAUG00000008959	-	60	82.095	Mesocricetus_auratus
ENSMZEG00005023141	setd1a	74	87.960	ENSMMOG00000016992	setd1a	99	93.123	Mola_mola
ENSMZEG00005023141	setd1a	99	77.275	ENSMALG00000007401	setd1a	98	77.396	Monopterus_albus
ENSMZEG00005023141	setd1a	51	81.757	MGP_PahariEiJ_G0013726	-	100	73.096	Mus_pahari
ENSMZEG00005023141	setd1a	53	81.757	MGP_SPRETEiJ_G0031633	Setd1a	100	72.589	Mus_spretus
ENSMZEG00005023141	setd1a	100	93.191	ENSNBRG00000004760	setd1a	100	93.191	Neolamprologus_brichardi
ENSMZEG00005023141	setd1a	86	89.667	ENSONIG00000009854	setd1a	91	89.667	Oreochromis_niloticus
ENSMZEG00005023141	setd1a	100	79.729	ENSORLG00000002213	setd1a	100	80.814	Oryzias_latipes
ENSMZEG00005023141	setd1a	100	78.652	ENSORLG00020011897	setd1a	100	80.868	Oryzias_latipes_hni
ENSMZEG00005023141	setd1a	100	79.240	ENSORLG00015004826	setd1a	100	80.914	Oryzias_latipes_hsok
ENSMZEG00005023141	setd1a	100	79.021	ENSOMEG00000019732	setd1a	100	80.452	Oryzias_melastigma
ENSMZEG00005023141	setd1a	52	67.905	ENSOGAG00000028006	-	54	67.905	Otolemur_garnettii
ENSMZEG00005023141	setd1a	100	78.165	ENSPFOG00000013669	setd1a	100	77.667	Poecilia_formosa
ENSMZEG00005023141	setd1a	100	78.959	ENSPLAG00000009294	setd1a	100	78.869	Poecilia_latipinna
ENSMZEG00005023141	setd1a	100	80.063	ENSPMEG00000005864	setd1a	100	78.933	Poecilia_mexicana
ENSMZEG00005023141	setd1a	100	79.530	ENSPREG00000010201	setd1a	100	79.033	Poecilia_reticulata
ENSMZEG00005023141	setd1a	100	98.954	ENSPNYG00000014139	setd1a	100	98.954	Pundamilia_nyererei
ENSMZEG00005023141	setd1a	55	80.546	ENSRBIG00000033047	-	64	79.730	Rhinopithecus_bieti
ENSMZEG00005023141	setd1a	53	80.546	ENSRROG00000040062	-	70	80.546	Rhinopithecus_roxellana
ENSMZEG00005023141	setd1a	100	83.845	ENSSMAG00000008846	setd1a	100	85.295	Scophthalmus_maximus
ENSMZEG00005023141	setd1a	100	88.013	ENSSDUG00000022142	setd1a	100	88.283	Seriola_dumerili
ENSMZEG00005023141	setd1a	100	87.877	ENSSLDG00000018250	setd1a	100	88.148	Seriola_lalandi_dorsalis
ENSMZEG00005023141	setd1a	100	88.819	ENSSPAG00000007822	setd1a	100	89.365	Stegastes_partitus
ENSMZEG00005023141	setd1a	83	81.275	ENSTRUG00000008953	setd1a	99	82.558	Takifugu_rubripes
ENSMZEG00005023141	setd1a	50	89.096	ENSTNIG00000014930	setd1a	89	94.737	Tetraodon_nigroviridis
ENSMZEG00005023141	setd1a	95	80.453	ENSXCOG00000017585	setd1a	100	74.853	Xiphophorus_couchianus
ENSMZEG00005023141	setd1a	100	80.515	ENSXMAG00000008021	setd1a	100	79.846	Xiphophorus_maculatus