EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023173 (Gene tree)
Gene ID: 101478320
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 10544 bases
Position: chrLG7:26968537-26979080
Accession: 101478320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005031080	YTH	PF04146.15	1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005032082	-	2566	XM_004556173	ENSMZEP00005031080	683 (aa)	XP_004556230	-

Gene Model

Click here to download ENSMZEG00005023173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023173	ythdc1	59	66.362	ENSG00000083896	YTHDC1	93	50.980	Homo_sapiens
ENSMZEG00005023173	ythdc1	82	85.993	ENSAPOG00000013997	ythdc1	93	79.375	Acanthochromis_polyacanthus
ENSMZEG00005023173	ythdc1	59	66.133	ENSAMEG00000005688	YTHDC1	57	60.092	Ailuropoda_melanoleuca
ENSMZEG00005023173	ythdc1	81	95.070	ENSACIG00000019728	ythdc1	91	84.848	Amphilophus_citrinellus
ENSMZEG00005023173	ythdc1	94	91.393	ENSAOCG00000000239	ythdc1	94	91.393	Amphiprion_ocellaris
ENSMZEG00005023173	ythdc1	84	90.210	ENSAPEG00000000618	ythdc1	90	90.210	Amphiprion_percula
ENSMZEG00005023173	ythdc1	88	87.107	ENSATEG00000023007	ythdc1	92	87.916	Anabas_testudineus
ENSMZEG00005023173	ythdc1	92	54.867	ENSAPLG00000009921	YTHDC1	60	60.780	Anas_platyrhynchos
ENSMZEG00005023173	ythdc1	93	54.848	ENSACAG00000009697	YTHDC1	58	59.404	Anolis_carolinensis
ENSMZEG00005023173	ythdc1	59	66.362	ENSANAG00000001522	YTHDC1	57	59.633	Aotus_nancymaae
ENSMZEG00005023173	ythdc1	100	100.000	ENSACLG00000019371	ythdc1	100	100.000	Astatotilapia_calliptera
ENSMZEG00005023173	ythdc1	93	63.609	ENSAMXG00000006978	ythdc1	92	60.090	Astyanax_mexicanus
ENSMZEG00005023173	ythdc1	59	65.217	ENSBTAG00000015572	YTHDC1	57	59.404	Bos_taurus
ENSMZEG00005023173	ythdc1	59	66.362	ENSCJAG00000009934	YTHDC1	57	59.633	Callithrix_jacchus
ENSMZEG00005023173	ythdc1	59	66.133	ENSCAFG00000002821	YTHDC1	57	60.092	Canis_familiaris
ENSMZEG00005023173	ythdc1	59	66.133	ENSCAFG00020027112	YTHDC1	57	60.092	Canis_lupus_dingo
ENSMZEG00005023173	ythdc1	69	54.286	ENSCHIG00000004810	YTHDC1	54	54.197	Capra_hircus
ENSMZEG00005023173	ythdc1	59	66.362	ENSTSYG00000011668	YTHDC1	92	52.117	Carlito_syrichta
ENSMZEG00005023173	ythdc1	91	41.755	ENSCAPG00000008722	YTHDC1	68	42.355	Cavia_aperea
ENSMZEG00005023173	ythdc1	59	59.039	ENSCPOG00000010929	YTHDC1	92	47.881	Cavia_porcellus
ENSMZEG00005023173	ythdc1	59	66.362	ENSCCAG00000035754	YTHDC1	57	59.633	Cebus_capucinus
ENSMZEG00005023173	ythdc1	59	66.268	ENSCATG00000036320	YTHDC1	93	53.606	Cercocebus_atys
ENSMZEG00005023173	ythdc1	92	54.772	ENSCLAG00000005482	YTHDC1	58	58.333	Chinchilla_lanigera
ENSMZEG00005023173	ythdc1	59	66.362	ENSCSAG00000005252	YTHDC1	57	59.633	Chlorocebus_sabaeus
ENSMZEG00005023173	ythdc1	93	58.537	ENSCPBG00000021965	YTHDC1	94	51.424	Chrysemys_picta_bellii
ENSMZEG00005023173	ythdc1	59	66.362	ENSCANG00000004769	YTHDC1	92	53.411	Colobus_angolensis_palliatus
ENSMZEG00005023173	ythdc1	59	66.029	ENSCGRG00001000816	Ythdc1	93	51.825	Cricetulus_griseus_chok1gshd
ENSMZEG00005023173	ythdc1	59	66.133	ENSCGRG00000009807	Ythdc1	92	51.479	Cricetulus_griseus_crigri
ENSMZEG00005023173	ythdc1	94	83.670	ENSCSEG00000020404	ythdc1	94	83.670	Cynoglossus_semilaevis
ENSMZEG00005023173	ythdc1	94	80.751	ENSCVAG00000022349	ythdc1	94	82.031	Cyprinodon_variegatus
ENSMZEG00005023173	ythdc1	93	63.470	ENSDARG00000051953	ythdc1	92	59.119	Danio_rerio
ENSMZEG00005023173	ythdc1	93	53.824	ENSDNOG00000004949	YTHDC1	57	59.633	Dasypus_novemcinctus
ENSMZEG00005023173	ythdc1	59	66.362	ENSDORG00000013045	Ythdc1	58	59.633	Dipodomys_ordii
ENSMZEG00005023173	ythdc1	78	65.385	ENSETEG00000001878	YTHDC1	51	82.000	Echinops_telfairi
ENSMZEG00005023173	ythdc1	59	66.133	ENSEASG00005018383	YTHDC1	61	60.092	Equus_asinus_asinus
ENSMZEG00005023173	ythdc1	92	69.192	ENSECAG00000018303	YTHDC1	78	66.304	Equus_caballus
ENSMZEG00005023173	ythdc1	59	65.148	ENSEEUG00000015466	YTHDC1	57	59.404	Erinaceus_europaeus
ENSMZEG00005023173	ythdc1	93	60.972	ENSELUG00000014029	ythdc1	92	57.249	Esox_lucius
ENSMZEG00005023173	ythdc1	59	66.133	ENSFCAG00000026791	YTHDC1	57	60.092	Felis_catus
ENSMZEG00005023173	ythdc1	76	62.882	ENSFALG00000006581	YTHDC1	83	66.576	Ficedula_albicollis
ENSMZEG00005023173	ythdc1	59	66.133	ENSFDAG00000018560	YTHDC1	58	59.633	Fukomys_damarensis
ENSMZEG00005023173	ythdc1	92	55.387	ENSGALG00000035906	YTHDC1	54	61.687	Gallus_gallus
ENSMZEG00005023173	ythdc1	94	71.552	ENSGACG00000015486	ythdc1	94	71.839	Gasterosteus_aculeatus
ENSMZEG00005023173	ythdc1	93	58.182	ENSGAGG00000007108	YTHDC1	92	53.949	Gopherus_agassizii
ENSMZEG00005023173	ythdc1	59	66.268	ENSGGOG00000021958	YTHDC1	93	53.502	Gorilla_gorilla
ENSMZEG00005023173	ythdc1	100	99.854	ENSHBUG00000019288	ythdc1	100	99.854	Haplochromis_burtoni
ENSMZEG00005023173	ythdc1	59	66.029	ENSHGLG00000006319	-	58	58.559	Heterocephalus_glaber_female
ENSMZEG00005023173	ythdc1	59	64.853	ENSHGLG00100001556	-	58	57.432	Heterocephalus_glaber_male
ENSMZEG00005023173	ythdc1	69	79.847	ENSHCOG00000001520	ythdc1	88	76.286	Hippocampus_comes
ENSMZEG00005023173	ythdc1	93	63.385	ENSIPUG00000018136	ythdc1	92	60.308	Ictalurus_punctatus
ENSMZEG00005023173	ythdc1	59	65.169	ENSSTOG00000013652	YTHDC1	57	58.559	Ictidomys_tridecemlineatus
ENSMZEG00005023173	ythdc1	59	65.789	ENSJJAG00000010268	Ythdc1	57	60.482	Jaculus_jaculus
ENSMZEG00005023173	ythdc1	60	91.484	ENSKMAG00000006483	ythdc1	87	93.012	Kryptolebias_marmoratus
ENSMZEG00005023173	ythdc1	62	78.182	ENSLBEG00000020831	ythdc1	88	97.778	Labrus_bergylta
ENSMZEG00005023173	ythdc1	59	63.205	ENSLACG00000004893	YTHDC1	61	60.225	Latimeria_chalumnae
ENSMZEG00005023173	ythdc1	93	58.106	ENSLOCG00000003045	ythdc1	87	55.252	Lepisosteus_oculatus
ENSMZEG00005023173	ythdc1	93	55.367	ENSLAFG00000021592	YTHDC1	65	64.543	Loxodonta_africana
ENSMZEG00005023173	ythdc1	59	66.268	ENSMFAG00000031927	YTHDC1	92	53.411	Macaca_fascicularis
ENSMZEG00005023173	ythdc1	59	66.362	ENSMMUG00000002265	YTHDC1	57	59.633	Macaca_mulatta
ENSMZEG00005023173	ythdc1	59	66.362	ENSMNEG00000033751	YTHDC1	92	53.411	Macaca_nemestrina
ENSMZEG00005023173	ythdc1	59	66.362	ENSMLEG00000042147	YTHDC1	92	53.411	Mandrillus_leucophaeus
ENSMZEG00005023173	ythdc1	94	85.139	ENSMAMG00000013122	ythdc1	92	87.578	Mastacembelus_armatus
ENSMZEG00005023173	ythdc1	93	55.313	ENSMGAG00000010391	YTHDC1	59	60.321	Meleagris_gallopavo
ENSMZEG00005023173	ythdc1	59	66.029	ENSMAUG00000001286	Ythdc1	93	51.679	Mesocricetus_auratus
ENSMZEG00005023173	ythdc1	93	54.393	ENSMICG00000034640	YTHDC1	93	52.095	Microcebus_murinus
ENSMZEG00005023173	ythdc1	59	66.029	ENSMOCG00000020201	Ythdc1	92	51.906	Microtus_ochrogaster
ENSMZEG00005023173	ythdc1	75	81.273	ENSMMOG00000021200	ythdc1	93	73.343	Mola_mola
ENSMZEG00005023173	ythdc1	93	56.681	ENSMODG00000020754	-	92	52.161	Monodelphis_domestica
ENSMZEG00005023173	ythdc1	50	48.857	ENSMODG00000004117	-	74	58.730	Monodelphis_domestica
ENSMZEG00005023173	ythdc1	97	41.010	ENSMODG00000014337	-	57	62.637	Monodelphis_domestica
ENSMZEG00005023173	ythdc1	64	44.885	ENSMODG00000009173	-	60	59.091	Monodelphis_domestica
ENSMZEG00005023173	ythdc1	83	86.911	ENSMALG00000013412	ythdc1	93	86.420	Monopterus_albus
ENSMZEG00005023173	ythdc1	59	66.133	MGP_CAROLIEiJ_G0027347	Ythdc1	93	52.416	Mus_caroli
ENSMZEG00005023173	ythdc1	93	55.337	ENSMUSG00000035851	Ythdc1	93	52.703	Mus_musculus
ENSMZEG00005023173	ythdc1	93	54.916	MGP_PahariEiJ_G0017126	Ythdc1	93	52.703	Mus_pahari
ENSMZEG00005023173	ythdc1	93	54.494	MGP_SPRETEiJ_G0028339	Ythdc1	93	52.703	Mus_spretus
ENSMZEG00005023173	ythdc1	75	66.818	ENSMPUG00000001743	YTHDC1	68	65.657	Mustela_putorius_furo
ENSMZEG00005023173	ythdc1	59	65.904	ENSMLUG00000016300	YTHDC1	58	59.862	Myotis_lucifugus
ENSMZEG00005023173	ythdc1	73	100.000	ENSNBRG00000007663	ythdc1	100	84.968	Neolamprologus_brichardi
ENSMZEG00005023173	ythdc1	59	64.270	ENSNLEG00000009202	YTHDC1	92	50.071	Nomascus_leucogenys
ENSMZEG00005023173	ythdc1	71	69.159	ENSOPRG00000008986	YTHDC1	54	62.893	Ochotona_princeps
ENSMZEG00005023173	ythdc1	92	55.429	ENSODEG00000001715	YTHDC1	57	59.404	Octodon_degus
ENSMZEG00005023173	ythdc1	99	99.559	ENSONIG00000012651	ythdc1	100	99.559	Oreochromis_niloticus
ENSMZEG00005023173	ythdc1	73	69.173	ENSOCUG00000015886	YTHDC1	63	66.304	Oryctolagus_cuniculus
ENSMZEG00005023173	ythdc1	94	82.473	ENSORLG00000030544	ythdc1	95	81.250	Oryzias_latipes
ENSMZEG00005023173	ythdc1	94	83.255	ENSORLG00020019316	ythdc1	95	81.847	Oryzias_latipes_hni
ENSMZEG00005023173	ythdc1	94	77.984	ENSOMEG00000000551	ythdc1	95	78.173	Oryzias_melastigma
ENSMZEG00005023173	ythdc1	59	66.819	ENSOGAG00000003362	YTHDC1	92	51.983	Otolemur_garnettii
ENSMZEG00005023173	ythdc1	59	65.217	ENSOARG00000008633	YTHDC1	57	59.404	Ovis_aries
ENSMZEG00005023173	ythdc1	59	66.268	ENSPPAG00000041315	YTHDC1	93	50.980	Pan_paniscus
ENSMZEG00005023173	ythdc1	59	66.029	ENSPPRG00000011979	YTHDC1	56	60.964	Panthera_pardus
ENSMZEG00005023173	ythdc1	59	65.550	ENSPTIG00000015527	YTHDC1	58	58.559	Panthera_tigris_altaica
ENSMZEG00005023173	ythdc1	59	66.268	ENSPTRG00000016105	YTHDC1	93	50.980	Pan_troglodytes
ENSMZEG00005023173	ythdc1	59	66.268	ENSPANG00000021590	YTHDC1	92	53.502	Papio_anubis
ENSMZEG00005023173	ythdc1	93	60.292	ENSPKIG00000018497	ythdc1	59	65.148	Paramormyrops_kingsleyae
ENSMZEG00005023173	ythdc1	92	54.692	ENSPSIG00000002782	YTHDC1	92	50.872	Pelodiscus_sinensis
ENSMZEG00005023173	ythdc1	57	73.273	ENSPMGG00000000970	-	78	72.072	Periophthalmus_magnuspinnatus
ENSMZEG00005023173	ythdc1	59	66.133	ENSPEMG00000013850	Ythdc1	92	51.407	Peromyscus_maniculatus_bairdii
ENSMZEG00005023173	ythdc1	93	56.681	ENSPCIG00000006870	YTHDC1	92	52.774	Phascolarctos_cinereus
ENSMZEG00005023173	ythdc1	94	79.499	ENSPFOG00000013404	ythdc1	94	81.690	Poecilia_formosa
ENSMZEG00005023173	ythdc1	60	87.010	ENSPLAG00000011079	ythdc1	87	87.348	Poecilia_latipinna
ENSMZEG00005023173	ythdc1	94	79.812	ENSPMEG00000009238	ythdc1	94	82.003	Poecilia_mexicana
ENSMZEG00005023173	ythdc1	94	67.963	ENSPREG00000016973	ythdc1	90	81.362	Poecilia_reticulata
ENSMZEG00005023173	ythdc1	59	66.362	ENSPPYG00000014726	YTHDC1	65	59.633	Pongo_abelii
ENSMZEG00005023173	ythdc1	93	51.395	ENSPCOG00000019105	YTHDC1	92	49.926	Propithecus_coquereli
ENSMZEG00005023173	ythdc1	59	62.929	ENSPVAG00000015551	YTHDC1	56	57.569	Pteropus_vampyrus
ENSMZEG00005023173	ythdc1	99	100.000	ENSPNYG00000011687	ythdc1	100	100.000	Pundamilia_nyererei
ENSMZEG00005023173	ythdc1	93	64.939	ENSPNAG00000028365	ythdc1	92	60.241	Pygocentrus_nattereri
ENSMZEG00005023173	ythdc1	59	64.944	ENSRNOG00000001996	Ythdc1	93	51.464	Rattus_norvegicus
ENSMZEG00005023173	ythdc1	59	65.463	ENSRBIG00000028279	YTHDC1	92	53.229	Rhinopithecus_bieti
ENSMZEG00005023173	ythdc1	59	66.362	ENSRROG00000035028	YTHDC1	92	53.411	Rhinopithecus_roxellana
ENSMZEG00005023173	ythdc1	59	66.268	ENSSBOG00000022353	YTHDC1	92	53.411	Saimiri_boliviensis_boliviensis
ENSMZEG00005023173	ythdc1	93	55.947	ENSSHAG00000002538	YTHDC1	92	51.744	Sarcophilus_harrisii
ENSMZEG00005023173	ythdc1	93	60.790	ENSSFOG00015003298	ythdc1	59	69.175	Scleropages_formosus
ENSMZEG00005023173	ythdc1	94	83.670	ENSSMAG00000009086	ythdc1	94	84.317	Scophthalmus_maximus
ENSMZEG00005023173	ythdc1	94	90.994	ENSSDUG00000022008	ythdc1	94	91.615	Seriola_dumerili
ENSMZEG00005023173	ythdc1	94	90.994	ENSSLDG00000007926	ythdc1	94	91.615	Seriola_lalandi_dorsalis
ENSMZEG00005023173	ythdc1	59	65.446	ENSSARG00000010960	YTHDC1	72	59.404	Sorex_araneus
ENSMZEG00005023173	ythdc1	93	55.522	ENSSPUG00000009357	YTHDC1	61	60.092	Sphenodon_punctatus
ENSMZEG00005023173	ythdc1	94	90.839	ENSSPAG00000011449	ythdc1	94	91.925	Stegastes_partitus
ENSMZEG00005023173	ythdc1	59	66.133	ENSSSCG00000035505	YTHDC1	61	59.009	Sus_scrofa
ENSMZEG00005023173	ythdc1	93	54.755	ENSTGUG00000004452	-	59	60.550	Taeniopygia_guttata
ENSMZEG00005023173	ythdc1	94	70.634	ENSTRUG00000010142	ythdc1	85	85.000	Takifugu_rubripes
ENSMZEG00005023173	ythdc1	96	74.203	ENSTNIG00000013243	ythdc1	91	75.819	Tetraodon_nigroviridis
ENSMZEG00005023173	ythdc1	59	64.989	ENSTTRG00000005083	YTHDC1	57	58.945	Tursiops_truncatus
ENSMZEG00005023173	ythdc1	59	66.133	ENSUAMG00000010388	YTHDC1	61	60.092	Ursus_americanus
ENSMZEG00005023173	ythdc1	92	51.343	ENSUMAG00000013668	YTHDC1	61	51.810	Ursus_maritimus
ENSMZEG00005023173	ythdc1	93	53.701	ENSVPAG00000009040	YTHDC1	92	52.269	Vicugna_pacos
ENSMZEG00005023173	ythdc1	59	66.133	ENSVVUG00000005387	YTHDC1	61	60.092	Vulpes_vulpes
ENSMZEG00005023173	ythdc1	93	57.078	ENSXETG00000017960	ythdc1	57	64.951	Xenopus_tropicalis
ENSMZEG00005023173	ythdc1	52	76.415	ENSXCOG00000000530	ythdc1	82	66.667	Xiphophorus_couchianus
ENSMZEG00005023173	ythdc1	94	80.908	ENSXMAG00000005196	ythdc1	94	79.782	Xiphophorus_maculatus