EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023224 (Gene tree)
Gene ID: 101470708
Gene Symbol: -
Alias: -
Full Name: oligoribonuclease%2C mitochondrial
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 9012 bases
Position: chrLG10:824993-834004
Accession: 101470708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005031143	RNase_T	PF00929.24	3.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005032148	-	1797	XM_004574290	ENSMZEP00005031143	259 (aa)	XP_004574347	UPI000329BA0A

Gene Model

Click here to download ENSMZEG00005023224's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023224's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023224	-	81	73.934	ENSG00000076043	REXO2	96	79.558	Homo_sapiens
ENSMZEG00005023224	-	82	73.214	ENSAMEG00000013263	REXO2	95	73.214	Ailuropoda_melanoleuca
ENSMZEG00005023224	-	71	89.730	ENSACIG00000023553	smfn	100	89.730	Amphilophus_citrinellus
ENSMZEG00005023224	-	50	89.394	ENSAOCG00000011565	smfn	80	89.394	Amphiprion_ocellaris
ENSMZEG00005023224	-	97	74.206	ENSAPEG00000012435	smfn	90	74.206	Amphiprion_percula
ENSMZEG00005023224	-	95	71.324	ENSATEG00000015385	smfn	97	71.324	Anabas_testudineus
ENSMZEG00005023224	-	73	76.842	ENSAPLG00000005045	REXO2	93	76.842	Anas_platyrhynchos
ENSMZEG00005023224	-	74	69.744	ENSACAG00000011631	REXO2	91	69.744	Anolis_carolinensis
ENSMZEG00005023224	-	82	72.247	ENSANAG00000020834	REXO2	95	72.247	Aotus_nancymaae
ENSMZEG00005023224	-	100	100.000	ENSACLG00000024566	smfn	100	100.000	Astatotilapia_calliptera
ENSMZEG00005023224	-	82	72.247	ENSBTAG00000005843	REXO2	95	72.247	Bos_taurus
ENSMZEG00005023224	-	71	47.826	WBGene00007429	C08B6.8	92	55.556	Caenorhabditis_elegans
ENSMZEG00005023224	-	82	71.366	ENSCJAG00000012434	REXO2	95	71.366	Callithrix_jacchus
ENSMZEG00005023224	-	76	77.114	ENSCAFG00000013511	REXO2	85	77.114	Canis_familiaris
ENSMZEG00005023224	-	76	78.109	ENSCAFG00020002513	REXO2	85	78.109	Canis_lupus_dingo
ENSMZEG00005023224	-	82	72.247	ENSCHIG00000009264	REXO2	95	72.247	Capra_hircus
ENSMZEG00005023224	-	72	68.617	ENSTSYG00000027948	-	96	68.617	Carlito_syrichta
ENSMZEG00005023224	-	82	71.806	ENSTSYG00000002237	REXO2	95	71.806	Carlito_syrichta
ENSMZEG00005023224	-	69	80.110	ENSCAPG00000006093	REXO2	96	80.110	Cavia_aperea
ENSMZEG00005023224	-	86	72.566	ENSCPOG00000010548	REXO2	97	71.304	Cavia_porcellus
ENSMZEG00005023224	-	82	72.247	ENSCCAG00000034979	REXO2	95	72.247	Cebus_capucinus
ENSMZEG00005023224	-	77	75.120	ENSCATG00000015278	REXO2	95	73.214	Cercocebus_atys
ENSMZEG00005023224	-	82	73.991	ENSCLAG00000011195	REXO2	94	73.991	Chinchilla_lanigera
ENSMZEG00005023224	-	77	75.120	ENSCSAG00000002754	REXO2	95	73.214	Chlorocebus_sabaeus
ENSMZEG00005023224	-	82	71.875	ENSCHOG00000000642	-	95	71.875	Choloepus_hoffmanni
ENSMZEG00005023224	-	54	69.930	ENSCPBG00000009359	REXO2	99	69.930	Chrysemys_picta_bellii
ENSMZEG00005023224	-	71	60.656	ENSCING00000009858	-	88	60.656	Ciona_intestinalis
ENSMZEG00005023224	-	77	75.120	ENSCANG00000034756	REXO2	95	73.214	Colobus_angolensis_palliatus
ENSMZEG00005023224	-	73	79.167	ENSCGRG00001013673	-	94	79.167	Cricetulus_griseus_chok1gshd
ENSMZEG00005023224	-	87	71.304	ENSCGRG00001019814	-	97	71.304	Cricetulus_griseus_chok1gshd
ENSMZEG00005023224	-	73	77.604	ENSCGRG00001010922	-	94	77.604	Cricetulus_griseus_chok1gshd
ENSMZEG00005023224	-	87	71.304	ENSCGRG00000006235	Rexo2	97	71.304	Cricetulus_griseus_crigri
ENSMZEG00005023224	-	96	66.788	ENSCSEG00000007214	smfn	99	67.153	Cynoglossus_semilaevis
ENSMZEG00005023224	-	65	88.757	ENSCVAG00000012008	smfn	91	88.757	Cyprinodon_variegatus
ENSMZEG00005023224	-	74	80.208	ENSDARG00000009806	smfn	74	80.208	Danio_rerio
ENSMZEG00005023224	-	71	77.487	ENSDNOG00000046533	REXO2	91	77.487	Dasypus_novemcinctus
ENSMZEG00005023224	-	76	78.607	ENSDORG00000011255	Rexo2	85	78.607	Dipodomys_ordii
ENSMZEG00005023224	-	78	58.621	ENSDORG00000025142	-	92	59.048	Dipodomys_ordii
ENSMZEG00005023224	-	74	51.042	FBgn0039115	CG10214	91	51.042	Drosophila_melanogaster
ENSMZEG00005023224	-	78	69.458	ENSEBUG00000013964	REXO2	70	69.458	Eptatretus_burgeri
ENSMZEG00005023224	-	76	78.109	ENSEASG00005006674	REXO2	85	78.109	Equus_asinus_asinus
ENSMZEG00005023224	-	76	78.109	ENSECAG00000005988	REXO2	85	78.109	Equus_caballus
ENSMZEG00005023224	-	76	78.392	ENSELUG00000020072	smfn	69	78.392	Esox_lucius
ENSMZEG00005023224	-	86	72.124	ENSFCAG00000018632	REXO2	95	71.806	Felis_catus
ENSMZEG00005023224	-	71	77.838	ENSFALG00000010044	REXO2	92	77.838	Ficedula_albicollis
ENSMZEG00005023224	-	82	73.661	ENSFDAG00000011764	REXO2	95	72.247	Fukomys_damarensis
ENSMZEG00005023224	-	73	80.208	ENSGMOG00000006370	smfn	99	80.208	Gadus_morhua
ENSMZEG00005023224	-	74	79.793	ENSGALG00000035980	REXO2	84	79.592	Gallus_gallus
ENSMZEG00005023224	-	82	80.465	ENSGAFG00000015349	smfn	77	80.465	Gambusia_affinis
ENSMZEG00005023224	-	72	85.484	ENSGACG00000020096	smfn	92	85.484	Gasterosteus_aculeatus
ENSMZEG00005023224	-	85	69.683	ENSGAGG00000021126	REXO2	96	69.683	Gopherus_agassizii
ENSMZEG00005023224	-	81	73.934	ENSGGOG00000023267	REXO2	98	69.417	Gorilla_gorilla
ENSMZEG00005023224	-	96	77.912	ENSHBUG00000020097	REXO2	100	77.912	Haplochromis_burtoni
ENSMZEG00005023224	-	82	73.214	ENSHGLG00000013556	REXO2	95	73.214	Heterocephalus_glaber_female
ENSMZEG00005023224	-	82	73.661	ENSHGLG00100005257	REXO2	95	73.661	Heterocephalus_glaber_male
ENSMZEG00005023224	-	69	84.270	ENSHCOG00000007122	smfn	98	84.270	Hippocampus_comes
ENSMZEG00005023224	-	75	82.234	ENSIPUG00000020440	rexo2	76	80.000	Ictalurus_punctatus
ENSMZEG00005023224	-	82	73.661	ENSSTOG00000012465	REXO2	95	73.661	Ictidomys_tridecemlineatus
ENSMZEG00005023224	-	78	55.660	ENSJJAG00000022605	-	87	55.660	Jaculus_jaculus
ENSMZEG00005023224	-	86	72.566	ENSJJAG00000013710	-	95	72.247	Jaculus_jaculus
ENSMZEG00005023224	-	75	86.082	ENSKMAG00000016795	smfn	70	85.787	Kryptolebias_marmoratus
ENSMZEG00005023224	-	70	83.696	ENSLBEG00000006021	smfn	97	83.696	Labrus_bergylta
ENSMZEG00005023224	-	84	64.414	ENSLACG00000018623	REXO2	91	64.414	Latimeria_chalumnae
ENSMZEG00005023224	-	76	79.397	ENSLOCG00000002389	smfn	95	79.397	Lepisosteus_oculatus
ENSMZEG00005023224	-	73	80.208	ENSLAFG00000012451	REXO2	85	78.109	Loxodonta_africana
ENSMZEG00005023224	-	77	75.120	ENSMFAG00000041155	REXO2	95	73.214	Macaca_fascicularis
ENSMZEG00005023224	-	77	75.120	ENSMMUG00000012269	REXO2	95	73.214	Macaca_mulatta
ENSMZEG00005023224	-	77	75.120	ENSMNEG00000033379	REXO2	95	73.214	Macaca_nemestrina
ENSMZEG00005023224	-	77	75.120	ENSMLEG00000036571	REXO2	95	73.214	Mandrillus_leucophaeus
ENSMZEG00005023224	-	80	88.462	ENSMAMG00000021209	smfn	75	88.462	Mastacembelus_armatus
ENSMZEG00005023224	-	100	100.000	ENSMZEG00005020730	REXO2	100	100.000	Maylandia_zebra
ENSMZEG00005023224	-	61	75.155	ENSMGAG00000003026	REXO2	99	75.155	Meleagris_gallopavo
ENSMZEG00005023224	-	87	71.304	ENSMAUG00000014576	Rexo2	97	71.304	Mesocricetus_auratus
ENSMZEG00005023224	-	76	78.607	ENSMICG00000010094	REXO2	85	78.607	Microcebus_murinus
ENSMZEG00005023224	-	87	71.304	ENSMOCG00000009016	Rexo2	97	71.304	Microtus_ochrogaster
ENSMZEG00005023224	-	96	67.293	ENSMMOG00000006430	smfn	99	67.293	Mola_mola
ENSMZEG00005023224	-	80	75.463	ENSMODG00000013913	REXO2	92	75.463	Monodelphis_domestica
ENSMZEG00005023224	-	86	75.630	ENSMALG00000018130	smfn	68	75.630	Monopterus_albus
ENSMZEG00005023224	-	88	69.828	MGP_CAROLIEiJ_G0032166	Rexo2	98	69.828	Mus_caroli
ENSMZEG00005023224	-	87	70.000	ENSMUSG00000032026	Rexo2	97	70.000	Mus_musculus
ENSMZEG00005023224	-	87	70.000	MGP_PahariEiJ_G0015034	Rexo2	97	70.000	Mus_pahari
ENSMZEG00005023224	-	87	70.000	MGP_SPRETEiJ_G0033305	Rexo2	97	70.000	Mus_spretus
ENSMZEG00005023224	-	82	73.214	ENSMPUG00000003947	REXO2	95	73.214	Mustela_putorius_furo
ENSMZEG00005023224	-	76	77.612	ENSMLUG00000009030	REXO2	85	77.612	Myotis_lucifugus
ENSMZEG00005023224	-	74	80.829	ENSNGAG00000008819	Rexo2	94	80.829	Nannospalax_galili
ENSMZEG00005023224	-	71	94.565	ENSNBRG00000006529	smfn	98	94.565	Neolamprologus_brichardi
ENSMZEG00005023224	-	81	73.934	ENSNLEG00000029745	REXO2	95	72.124	Nomascus_leucogenys
ENSMZEG00005023224	-	76	78.607	ENSMEUG00000011558	REXO2	92	78.607	Notamacropus_eugenii
ENSMZEG00005023224	-	76	54.229	ENSOPRG00000011076	REXO2	92	51.613	Ochotona_princeps
ENSMZEG00005023224	-	69	80.110	ENSODEG00000009750	-	96	80.110	Octodon_degus
ENSMZEG00005023224	-	69	63.536	ENSODEG00000016046	-	91	63.536	Octodon_degus
ENSMZEG00005023224	-	89	97.835	ENSONIG00000001954	smfn	100	97.835	Oreochromis_niloticus
ENSMZEG00005023224	-	73	79.167	ENSOANG00000001754	REXO2	81	79.167	Ornithorhynchus_anatinus
ENSMZEG00005023224	-	76	78.607	ENSOCUG00000004274	REXO2	90	73.661	Oryctolagus_cuniculus
ENSMZEG00005023224	-	96	68.924	ENSORLG00000005119	smfn	74	68.924	Oryzias_latipes
ENSMZEG00005023224	-	75	82.741	ENSORLG00020010121	smfn	64	82.741	Oryzias_latipes_hni
ENSMZEG00005023224	-	76	82.000	ENSORLG00015015699	smfn	65	82.000	Oryzias_latipes_hsok
ENSMZEG00005023224	-	53	80.435	ENSOMEG00000008940	-	97	80.435	Oryzias_melastigma
ENSMZEG00005023224	-	78	79.310	ENSOMEG00000016878	REXO2	75	79.310	Oryzias_melastigma
ENSMZEG00005023224	-	82	72.247	ENSOGAG00000016860	REXO2	95	72.247	Otolemur_garnettii
ENSMZEG00005023224	-	74	79.793	ENSOARG00000001040	REXO2	93	77.889	Ovis_aries
ENSMZEG00005023224	-	81	73.934	ENSPPAG00000039849	REXO2	95	72.124	Pan_paniscus
ENSMZEG00005023224	-	86	72.124	ENSPPRG00000007255	REXO2	95	71.806	Panthera_pardus
ENSMZEG00005023224	-	69	79.558	ENSPTIG00000015578	REXO2	96	79.558	Panthera_tigris_altaica
ENSMZEG00005023224	-	81	73.934	ENSPTRG00000004306	REXO2	95	72.124	Pan_troglodytes
ENSMZEG00005023224	-	77	75.120	ENSPANG00000010675	REXO2	95	73.214	Papio_anubis
ENSMZEG00005023224	-	92	68.016	ENSPKIG00000000911	smfn	77	83.784	Paramormyrops_kingsleyae
ENSMZEG00005023224	-	84	73.636	ENSPSIG00000005151	REXO2	80	73.636	Pelodiscus_sinensis
ENSMZEG00005023224	-	70	82.514	ENSPMGG00000007442	smfn	97	82.514	Periophthalmus_magnuspinnatus
ENSMZEG00005023224	-	87	58.261	ENSPEMG00000001421	Rexo2	97	58.261	Peromyscus_maniculatus_bairdii
ENSMZEG00005023224	-	80	75.463	ENSPCIG00000011227	REXO2	58	75.463	Phascolarctos_cinereus
ENSMZEG00005023224	-	86	79.646	ENSPFOG00000017861	smfn	99	84.500	Poecilia_formosa
ENSMZEG00005023224	-	78	76.847	ENSPLAG00000007327	REXO2	77	76.847	Poecilia_latipinna
ENSMZEG00005023224	-	86	80.088	ENSPMEG00000017343	smfn	80	80.088	Poecilia_mexicana
ENSMZEG00005023224	-	86	78.761	ENSPREG00000016438	smfn	80	78.761	Poecilia_reticulata
ENSMZEG00005023224	-	81	73.934	ENSPPYG00000003895	REXO2	95	72.124	Pongo_abelii
ENSMZEG00005023224	-	73	79.688	ENSPCAG00000005237	REXO2	85	77.612	Procavia_capensis
ENSMZEG00005023224	-	63	81.325	ENSPCOG00000027639	REXO2	85	81.325	Propithecus_coquereli
ENSMZEG00005023224	-	76	66.010	ENSPVAG00000005295	REXO2	85	66.010	Pteropus_vampyrus
ENSMZEG00005023224	-	100	99.614	ENSPNYG00000018401	smfn	100	99.614	Pundamilia_nyererei
ENSMZEG00005023224	-	93	65.267	ENSPNAG00000005290	smfn	97	65.649	Pygocentrus_nattereri
ENSMZEG00005023224	-	87	70.000	ENSRNOG00000018939	Rexo2	97	70.000	Rattus_norvegicus
ENSMZEG00005023224	-	77	75.120	ENSRBIG00000037809	REXO2	95	73.214	Rhinopithecus_bieti
ENSMZEG00005023224	-	77	75.120	ENSRROG00000038928	REXO2	95	73.214	Rhinopithecus_roxellana
ENSMZEG00005023224	-	90	38.272	YLR059C	REX2	75	42.574	Saccharomyces_cerevisiae
ENSMZEG00005023224	-	82	72.247	ENSSBOG00000028651	REXO2	95	72.247	Saimiri_boliviensis_boliviensis
ENSMZEG00005023224	-	80	75.000	ENSSHAG00000008008	REXO2	92	75.000	Sarcophilus_harrisii
ENSMZEG00005023224	-	69	80.663	ENSSFOG00015022414	smfn	96	80.663	Scleropages_formosus
ENSMZEG00005023224	-	95	69.597	ENSSMAG00000003168	smfn	99	69.597	Scophthalmus_maximus
ENSMZEG00005023224	-	83	80.087	ENSSDUG00000015624	smfn	81	80.087	Seriola_dumerili
ENSMZEG00005023224	-	83	79.476	ENSSLDG00000014005	smfn	81	79.476	Seriola_lalandi_dorsalis
ENSMZEG00005023224	-	60	70.253	ENSSPUG00000006005	REXO2	85	70.253	Sphenodon_punctatus
ENSMZEG00005023224	-	70	89.674	ENSSPAG00000001530	smfn	99	89.674	Stegastes_partitus
ENSMZEG00005023224	-	86	72.124	ENSSSCG00000015056	REXO2	95	72.124	Sus_scrofa
ENSMZEG00005023224	-	75	77.949	ENSTGUG00000000121	REXO2	97	70.259	Taeniopygia_guttata
ENSMZEG00005023224	-	78	82.673	ENSTRUG00000021529	smfn	75	82.673	Takifugu_rubripes
ENSMZEG00005023224	-	79	80.093	ENSTNIG00000008588	smfn	100	76.496	Tetraodon_nigroviridis
ENSMZEG00005023224	-	86	72.566	ENSTBEG00000017040	REXO2	95	72.566	Tupaia_belangeri
ENSMZEG00005023224	-	78	72.936	ENSTTRG00000014928	REXO2	85	77.612	Tursiops_truncatus
ENSMZEG00005023224	-	82	67.857	ENSUAMG00000019096	REXO2	97	74.603	Ursus_americanus
ENSMZEG00005023224	-	82	73.214	ENSUMAG00000003770	REXO2	95	73.214	Ursus_maritimus
ENSMZEG00005023224	-	64	62.651	ENSVPAG00000006301	REXO2	96	60.773	Vicugna_pacos
ENSMZEG00005023224	-	76	78.109	ENSVVUG00000025223	REXO2	85	78.109	Vulpes_vulpes
ENSMZEG00005023224	-	79	75.829	ENSXETG00000012648	rexo2	95	70.690	Xenopus_tropicalis
ENSMZEG00005023224	-	74	80.311	ENSXCOG00000018838	smfn	95	82.796	Xiphophorus_couchianus
ENSMZEG00005023224	-	97	66.426	ENSXMAG00000021125	smfn	89	66.426	Xiphophorus_maculatus