EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023278 (Gene tree)
Gene ID: 101471497
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 2232 bases
Position: chrLG7:28206508-28208739
Accession: 101471497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005031219	Ribosomal_S18	PF01084.20	4.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005032226	-	1390	XM_004561846	ENSMZEP00005031219	130 (aa)	XP_004561903	UPI00032A25E9

Gene Model

Click here to download ENSMZEG00005023278's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023278's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023278	mrps18c	100	73.077	ENSAPOG00000019045	mrps18c	100	73.077	Acanthochromis_polyacanthus
ENSMZEG00005023278	mrps18c	71	90.217	ENSACIG00000020253	mrps18c	91	90.217	Amphilophus_citrinellus
ENSMZEG00005023278	mrps18c	100	75.385	ENSAOCG00000014338	mrps18c	100	75.385	Amphiprion_ocellaris
ENSMZEG00005023278	mrps18c	67	91.954	ENSAPEG00000023068	-	87	88.043	Amphiprion_percula
ENSMZEG00005023278	mrps18c	100	74.615	ENSAPEG00000022956	mrps18c	100	74.615	Amphiprion_percula
ENSMZEG00005023278	mrps18c	100	70.769	ENSATEG00000023417	mrps18c	100	70.769	Anabas_testudineus
ENSMZEG00005023278	mrps18c	68	67.416	ENSAPLG00000012544	-	86	67.416	Anas_platyrhynchos
ENSMZEG00005023278	mrps18c	72	100.000	ENSACLG00000010521	mrps18c	91	100.000	Astatotilapia_calliptera
ENSMZEG00005023278	mrps18c	70	79.121	ENSAMXG00000012238	mrps18c	92	79.121	Astyanax_mexicanus
ENSMZEG00005023278	mrps18c	68	68.539	ENSCPBG00000007783	-	55	68.539	Chrysemys_picta_bellii
ENSMZEG00005023278	mrps18c	70	83.516	ENSCSEG00000000711	mrps18c	93	61.386	Cynoglossus_semilaevis
ENSMZEG00005023278	mrps18c	100	70.769	ENSCVAG00000020169	mrps18c	100	70.769	Cyprinodon_variegatus
ENSMZEG00005023278	mrps18c	98	61.417	ENSDARG00000069624	mrps18c	93	61.417	Danio_rerio
ENSMZEG00005023278	mrps18c	100	57.143	ENSELUG00000024603	mrps18c	100	57.143	Esox_lucius
ENSMZEG00005023278	mrps18c	100	68.462	ENSFHEG00000015550	mrps18c	95	68.462	Fundulus_heteroclitus
ENSMZEG00005023278	mrps18c	100	68.462	ENSFHEG00000018752	-	100	68.462	Fundulus_heteroclitus
ENSMZEG00005023278	mrps18c	95	52.419	ENSGALG00000023191	MRPS18C	83	52.419	Gallus_gallus
ENSMZEG00005023278	mrps18c	100	67.692	ENSGAFG00000008048	mrps18c	83	67.692	Gambusia_affinis
ENSMZEG00005023278	mrps18c	68	68.539	ENSGAGG00000015144	-	63	68.539	Gopherus_agassizii
ENSMZEG00005023278	mrps18c	100	100.000	ENSHBUG00000002008	mrps18c	100	100.000	Haplochromis_burtoni
ENSMZEG00005023278	mrps18c	85	71.171	ENSHCOG00000013161	mrps18c	83	71.171	Hippocampus_comes
ENSMZEG00005023278	mrps18c	70	75.824	ENSIPUG00000003783	mrps18c	88	75.824	Ictalurus_punctatus
ENSMZEG00005023278	mrps18c	100	70.769	ENSKMAG00000016467	mrps18c	100	70.769	Kryptolebias_marmoratus
ENSMZEG00005023278	mrps18c	100	73.077	ENSLBEG00000021861	mrps18c	100	73.077	Labrus_bergylta
ENSMZEG00005023278	mrps18c	100	73.077	ENSLBEG00000019174	mrps18c	100	73.077	Labrus_bergylta
ENSMZEG00005023278	mrps18c	98	53.125	ENSLACG00000011243	mrps18c	100	53.125	Latimeria_chalumnae
ENSMZEG00005023278	mrps18c	70	71.429	ENSLOCG00000012115	mrps18c	67	71.429	Lepisosteus_oculatus
ENSMZEG00005023278	mrps18c	100	68.657	ENSMAMG00000012386	mrps18c	100	68.657	Mastacembelus_armatus
ENSMZEG00005023278	mrps18c	72	89.247	ENSMMOG00000011316	mrps18c	71	89.247	Mola_mola
ENSMZEG00005023278	mrps18c	100	100.000	ENSNBRG00000006182	mrps18c	100	100.000	Neolamprologus_brichardi
ENSMZEG00005023278	mrps18c	68	70.787	ENSMEUG00000010972	-	70	70.787	Notamacropus_eugenii
ENSMZEG00005023278	mrps18c	100	96.154	ENSONIG00000012527	mrps18c	95	96.154	Oreochromis_niloticus
ENSMZEG00005023278	mrps18c	100	66.154	ENSORLG00015006869	mrps18c	100	66.154	Oryzias_latipes_hsok
ENSMZEG00005023278	mrps18c	69	77.778	ENSOMEG00000005009	mrps18c	87	77.778	Oryzias_melastigma
ENSMZEG00005023278	mrps18c	100	61.314	ENSPKIG00000021736	mrps18c	100	61.314	Paramormyrops_kingsleyae
ENSMZEG00005023278	mrps18c	70	86.813	ENSPMGG00000002991	mrps18c	92	86.813	Periophthalmus_magnuspinnatus
ENSMZEG00005023278	mrps18c	100	66.923	ENSPFOG00000002351	mrps18c	83	66.923	Poecilia_formosa
ENSMZEG00005023278	mrps18c	100	66.923	ENSPLAG00000015187	mrps18c	100	66.923	Poecilia_latipinna
ENSMZEG00005023278	mrps18c	100	66.154	ENSPMEG00000014488	mrps18c	83	66.154	Poecilia_mexicana
ENSMZEG00005023278	mrps18c	64	83.133	ENSPREG00000012593	mrps18c	85	83.133	Poecilia_reticulata
ENSMZEG00005023278	mrps18c	100	99.231	ENSPNYG00000010654	mrps18c	100	99.231	Pundamilia_nyererei
ENSMZEG00005023278	mrps18c	70	75.824	ENSPNAG00000009350	mrps18c	85	75.824	Pygocentrus_nattereri
ENSMZEG00005023278	mrps18c	100	61.538	ENSSFOG00015019444	mrps18c	93	61.538	Scleropages_formosus
ENSMZEG00005023278	mrps18c	100	73.077	ENSSDUG00000015676	mrps18c	100	73.077	Seriola_dumerili
ENSMZEG00005023278	mrps18c	71	86.957	ENSSLDG00000002034	mrps18c	71	86.957	Seriola_lalandi_dorsalis
ENSMZEG00005023278	mrps18c	82	61.682	ENSSPUG00000013990	-	78	61.682	Sphenodon_punctatus
ENSMZEG00005023278	mrps18c	99	68.992	ENSSPAG00000008687	mrps18c	99	68.992	Stegastes_partitus
ENSMZEG00005023278	mrps18c	100	71.538	ENSTRUG00000024403	mrps18c	100	71.538	Takifugu_rubripes
ENSMZEG00005023278	mrps18c	100	72.308	ENSTNIG00000005674	mrps18c	100	72.308	Tetraodon_nigroviridis
ENSMZEG00005023278	mrps18c	84	60.684	ENSXETG00000027597	mrps18c	89	60.684	Xenopus_tropicalis
ENSMZEG00005023278	mrps18c	100	64.615	ENSXCOG00000016208	mrps18c	89	84.270	Xiphophorus_couchianus
ENSMZEG00005023278	mrps18c	100	67.692	ENSXMAG00000012555	mrps18c	83	67.692	Xiphophorus_maculatus