EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023828 (Gene tree)
Gene ID: 101477324
Gene Symbol: fip1l1b
Alias: fip1l1|wu:fd36f11|zgc:103421
Full Name: pre-mRNA 3'-end-processing factor FIP1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13750 bases
Position: chrLG6:21469580-21483329
Accession: 101477324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005031950	Fip1	PF05182.13	1.3e-24	1	1
ENSMZEP00005031949	Fip1	PF05182.13	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005032984	-	2901	XM_014409080	ENSMZEP00005031950	537 (aa)	XP_014264566	-
ENSMZET00005032983	-	2955	XM_004564200	ENSMZEP00005031949	555 (aa)	XP_004564257	UPI000C23259D

Gene Model

Click here to download ENSMZEG00005023828's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023828	fip1l1b	71	97.917	ENSACIG00000001454	fip1l1b	96	97.917	Amphilophus_citrinellus
ENSMZEG00005023828	fip1l1b	100	93.165	ENSAOCG00000021043	fip1l1b	100	93.165	Amphiprion_ocellaris
ENSMZEG00005023828	fip1l1b	100	93.165	ENSAPEG00000022229	fip1l1b	100	93.165	Amphiprion_percula
ENSMZEG00005023828	fip1l1b	100	93.345	ENSATEG00000021757	fip1l1b	100	93.345	Anabas_testudineus
ENSMZEG00005023828	fip1l1b	89	55.818	ENSAPLG00000003042	-	90	57.834	Anas_platyrhynchos
ENSMZEG00005023828	fip1l1b	69	71.242	ENSACAG00000010556	-	75	71.053	Anolis_carolinensis
ENSMZEG00005023828	fip1l1b	100	99.820	ENSACLG00000010418	fip1l1b	100	99.820	Astatotilapia_calliptera
ENSMZEG00005023828	fip1l1b	50	43.704	ENSAMXG00000031045	fip1l1a	60	46.445	Astyanax_mexicanus
ENSMZEG00005023828	fip1l1b	100	71.858	ENSAMXG00000011126	fip1l1b	89	73.898	Astyanax_mexicanus
ENSMZEG00005023828	fip1l1b	83	62.664	ENSBTAG00000020653	FIP1L1	99	62.477	Bos_taurus
ENSMZEG00005023828	fip1l1b	83	59.667	ENSCHIG00000025903	-	99	59.965	Capra_hircus
ENSMZEG00005023828	fip1l1b	83	55.799	ENSCAPG00000009569	-	80	65.455	Cavia_aperea
ENSMZEG00005023828	fip1l1b	83	62.363	ENSCPOG00000010770	-	85	66.813	Cavia_porcellus
ENSMZEG00005023828	fip1l1b	99	61.475	ENSCPBG00000025019	-	99	59.511	Chrysemys_picta_bellii
ENSMZEG00005023828	fip1l1b	99	57.041	ENSCGRG00001018568	Fip1l1	99	60.072	Cricetulus_griseus_chok1gshd
ENSMZEG00005023828	fip1l1b	99	57.041	ENSCGRG00000000208	Fip1l1	99	60.072	Cricetulus_griseus_crigri
ENSMZEG00005023828	fip1l1b	100	91.280	ENSCSEG00000006583	fip1l1b	100	91.280	Cynoglossus_semilaevis
ENSMZEG00005023828	fip1l1b	100	90.018	ENSCVAG00000023435	fip1l1b	100	90.018	Cyprinodon_variegatus
ENSMZEG00005023828	fip1l1b	100	43.031	ENSDARG00000043328	fip1l1a	92	48.241	Danio_rerio
ENSMZEG00005023828	fip1l1b	100	71.034	ENSDARG00000070431	fip1l1b	100	70.396	Danio_rerio
ENSMZEG00005023828	fip1l1b	81	50.800	ENSETEG00000018271	-	74	67.320	Echinops_telfairi
ENSMZEG00005023828	fip1l1b	83	60.394	ENSEASG00005019566	-	99	59.124	Equus_asinus_asinus
ENSMZEG00005023828	fip1l1b	55	55.398	ENSEEUG00000004965	-	59	55.172	Erinaceus_europaeus
ENSMZEG00005023828	fip1l1b	68	78.636	ENSELUG00000001280	fip1l1b	76	75.983	Esox_lucius
ENSMZEG00005023828	fip1l1b	99	51.171	ENSELUG00000004607	fip1l1a	99	55.882	Esox_lucius
ENSMZEG00005023828	fip1l1b	100	89.982	ENSFHEG00000003843	fip1l1b	100	89.982	Fundulus_heteroclitus
ENSMZEG00005023828	fip1l1b	100	69.618	ENSGMOG00000004913	fip1l1b	100	69.718	Gadus_morhua
ENSMZEG00005023828	fip1l1b	99	61.525	ENSGALG00000013943	-	99	61.706	Gallus_gallus
ENSMZEG00005023828	fip1l1b	100	89.130	ENSGAFG00000008253	fip1l1b	100	89.130	Gambusia_affinis
ENSMZEG00005023828	fip1l1b	100	73.957	ENSGACG00000015946	fip1l1b	100	73.411	Gasterosteus_aculeatus
ENSMZEG00005023828	fip1l1b	99	61.475	ENSGAGG00000009763	-	99	59.511	Gopherus_agassizii
ENSMZEG00005023828	fip1l1b	50	51.625	ENSGAGG00000017677	-	58	56.944	Gopherus_agassizii
ENSMZEG00005023828	fip1l1b	100	99.820	ENSHBUG00000013978	fip1l1b	100	99.820	Haplochromis_burtoni
ENSMZEG00005023828	fip1l1b	99	84.286	ENSHCOG00000015834	fip1l1b	99	84.464	Hippocampus_comes
ENSMZEG00005023828	fip1l1b	100	58.803	ENSIPUG00000022454	fip1l1b	100	69.312	Ictalurus_punctatus
ENSMZEG00005023828	fip1l1b	100	88.909	ENSKMAG00000021938	fip1l1b	100	88.909	Kryptolebias_marmoratus
ENSMZEG00005023828	fip1l1b	100	89.946	ENSLBEG00000028819	fip1l1b	100	89.587	Labrus_bergylta
ENSMZEG00005023828	fip1l1b	96	62.429	ENSLACG00000011991	fip1l1a	96	62.477	Latimeria_chalumnae
ENSMZEG00005023828	fip1l1b	99	65.398	ENSLOCG00000014127	fip1l1b	99	66.143	Lepisosteus_oculatus
ENSMZEG00005023828	fip1l1b	100	92.022	ENSMAMG00000004535	fip1l1b	100	92.022	Mastacembelus_armatus
ENSMZEG00005023828	fip1l1b	99	54.386	ENSMAUG00000010526	Fip1l1	99	57.394	Mesocricetus_auratus
ENSMZEG00005023828	fip1l1b	99	55.258	ENSMOCG00000008020	Fip1l1	99	58.094	Microtus_ochrogaster
ENSMZEG00005023828	fip1l1b	77	79.954	ENSMMOG00000008262	fip1l1b	92	100.000	Mola_mola
ENSMZEG00005023828	fip1l1b	60	55.319	ENSMODG00000020654	-	93	52.071	Monodelphis_domestica
ENSMZEG00005023828	fip1l1b	100	69.189	ENSMALG00000000838	fip1l1b	84	85.714	Monopterus_albus
ENSMZEG00005023828	fip1l1b	83	61.002	MGP_CAROLIEiJ_G0027304	Fip1l1	99	59.892	Mus_caroli
ENSMZEG00005023828	fip1l1b	83	61.002	ENSMUSG00000029227	Fip1l1	99	59.892	Mus_musculus
ENSMZEG00005023828	fip1l1b	83	61.002	MGP_PahariEiJ_G0017085	Fip1l1	99	59.892	Mus_pahari
ENSMZEG00005023828	fip1l1b	83	61.002	MGP_SPRETEiJ_G0028299	Fip1l1	99	59.892	Mus_spretus
ENSMZEG00005023828	fip1l1b	83	62.144	ENSNGAG00000008849	Fip1l1	99	60.469	Nannospalax_galili
ENSMZEG00005023828	fip1l1b	100	99.640	ENSNBRG00000017832	fip1l1b	100	99.640	Neolamprologus_brichardi
ENSMZEG00005023828	fip1l1b	100	98.559	ENSONIG00000008785	fip1l1b	100	98.559	Oreochromis_niloticus
ENSMZEG00005023828	fip1l1b	84	50.854	ENSOANG00000003384	-	65	53.281	Ornithorhynchus_anatinus
ENSMZEG00005023828	fip1l1b	100	89.981	ENSORLG00000004397	fip1l1b	100	88.868	Oryzias_latipes
ENSMZEG00005023828	fip1l1b	100	90.167	ENSORLG00020008716	fip1l1b	100	88.683	Oryzias_latipes_hni
ENSMZEG00005023828	fip1l1b	100	90.167	ENSORLG00015006736	fip1l1b	100	89.054	Oryzias_latipes_hsok
ENSMZEG00005023828	fip1l1b	100	61.922	ENSOMEG00000015730	fip1l1b	98	85.714	Oryzias_melastigma
ENSMZEG00005023828	fip1l1b	83	57.796	ENSOARG00000018767	-	86	61.795	Ovis_aries
ENSMZEG00005023828	fip1l1b	100	73.788	ENSPMGG00000017028	fip1l1b	100	73.050	Periophthalmus_magnuspinnatus
ENSMZEG00005023828	fip1l1b	99	56.684	ENSPEMG00000002025	Fip1l1	99	60.072	Peromyscus_maniculatus_bairdii
ENSMZEG00005023828	fip1l1b	53	55.238	ENSPCIG00000019318	-	97	55.806	Phascolarctos_cinereus
ENSMZEG00005023828	fip1l1b	100	89.091	ENSPFOG00000014745	fip1l1b	100	89.091	Poecilia_formosa
ENSMZEG00005023828	fip1l1b	100	85.844	ENSPLAG00000010954	fip1l1b	100	88.929	Poecilia_latipinna
ENSMZEG00005023828	fip1l1b	100	89.273	ENSPMEG00000019187	fip1l1b	100	89.273	Poecilia_mexicana
ENSMZEG00005023828	fip1l1b	82	71.622	ENSPREG00000012535	fip1l1b	90	70.946	Poecilia_reticulata
ENSMZEG00005023828	fip1l1b	68	99.735	ENSPNYG00000015976	fip1l1b	99	99.735	Pundamilia_nyererei
ENSMZEG00005023828	fip1l1b	62	43.544	ENSPNAG00000009853	fip1l1a	59	50.237	Pygocentrus_nattereri
ENSMZEG00005023828	fip1l1b	57	73.438	ENSPNAG00000015341	fip1l1b	71	72.446	Pygocentrus_nattereri
ENSMZEG00005023828	fip1l1b	83	59.041	ENSRNOG00000002275	Fip1l1	99	58.273	Rattus_norvegicus
ENSMZEG00005023828	fip1l1b	84	53.488	ENSSHAG00000015789	-	86	57.564	Sarcophilus_harrisii
ENSMZEG00005023828	fip1l1b	52	49.315	ENSSFOG00015010948	-	55	56.311	Scleropages_formosus
ENSMZEG00005023828	fip1l1b	100	91.837	ENSSMAG00000013444	fip1l1b	100	91.651	Scophthalmus_maximus
ENSMZEG00005023828	fip1l1b	100	95.539	ENSSDUG00000004117	fip1l1b	100	95.539	Seriola_dumerili
ENSMZEG00005023828	fip1l1b	100	94.981	ENSSLDG00000024099	fip1l1b	100	94.796	Seriola_lalandi_dorsalis
ENSMZEG00005023828	fip1l1b	100	94.964	ENSSPAG00000017564	fip1l1b	100	94.964	Stegastes_partitus
ENSMZEG00005023828	fip1l1b	100	86.506	ENSTRUG00000001545	fip1l1b	100	86.876	Takifugu_rubripes
ENSMZEG00005023828	fip1l1b	100	77.703	ENSTNIG00000004104	fip1l1b	100	77.534	Tetraodon_nigroviridis
ENSMZEG00005023828	fip1l1b	84	56.539	ENSUMAG00000002758	-	90	61.684	Ursus_maritimus
ENSMZEG00005023828	fip1l1b	71	55.118	ENSVPAG00000011574	-	76	60.622	Vicugna_pacos
ENSMZEG00005023828	fip1l1b	96	60.000	ENSXETG00000011679	fip1l1	92	57.971	Xenopus_tropicalis
ENSMZEG00005023828	fip1l1b	100	68.081	ENSXCOG00000013656	fip1l1b	95	74.944	Xiphophorus_couchianus
ENSMZEG00005023828	fip1l1b	100	89.455	ENSXMAG00000017620	fip1l1b	100	89.455	Xiphophorus_maculatus