EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023861 (Gene tree)
Gene ID: 101475716
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 26917 bases
Position: chrLG6:22292465-22319381
Accession: 101475716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005031998	ResIII	PF04851.15	1.9e-08	1	1
ENSMZEP00005031997	ResIII	PF04851.15	1.9e-08	1	1
ENSMZEP00005031998	BRK	PF07533.16	6.8e-16	1	1
ENSMZEP00005031997	BRK	PF07533.16	6.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005033032	-	4773	-	ENSMZEP00005031998	1590 (aa)	-	-
ENSMZET00005033031	-	5043	XM_004567874	ENSMZEP00005031997	1608 (aa)	XP_004567931	-

Gene Model

Click here to download ENSMZEG00005023861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023861	-	98	83.794	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSMZEG00005023861	-	99	96.486	ENSAPOG00000004542	SMARCA4	99	96.486	Acanthochromis_polyacanthus
ENSMZEG00005023861	-	73	88.702	ENSAPOG00000003509	smarca4a	93	88.682	Acanthochromis_polyacanthus
ENSMZEG00005023861	-	98	80.435	ENSAMEG00000010868	SMARCA4	96	80.800	Ailuropoda_melanoleuca
ENSMZEG00005023861	-	95	94.478	ENSACIG00000003035	-	99	91.796	Amphilophus_citrinellus
ENSMZEG00005023861	-	98	82.971	ENSACIG00000021550	smarca4a	94	86.375	Amphilophus_citrinellus
ENSMZEG00005023861	-	95	95.607	ENSAOCG00000009450	-	98	95.607	Amphiprion_ocellaris
ENSMZEG00005023861	-	73	91.372	ENSAOCG00000019167	smarca4a	100	84.116	Amphiprion_ocellaris
ENSMZEG00005023861	-	73	91.458	ENSAPEG00000015559	smarca4a	100	84.185	Amphiprion_percula
ENSMZEG00005023861	-	99	96.365	ENSAPEG00000023108	-	97	96.365	Amphiprion_percula
ENSMZEG00005023861	-	98	85.544	ENSATEG00000011524	smarca4a	95	86.220	Anabas_testudineus
ENSMZEG00005023861	-	99	95.940	ENSATEG00000001094	-	96	95.940	Anabas_testudineus
ENSMZEG00005023861	-	98	83.626	ENSANAG00000036991	SMARCA4	94	82.887	Aotus_nancymaae
ENSMZEG00005023861	-	100	99.321	ENSACLG00000008638	-	100	99.321	Astatotilapia_calliptera
ENSMZEG00005023861	-	98	84.576	ENSACLG00000000163	smarca4a	96	85.850	Astatotilapia_calliptera
ENSMZEG00005023861	-	97	87.148	ENSAMXG00000011238	-	95	89.092	Astyanax_mexicanus
ENSMZEG00005023861	-	98	81.100	ENSAMXG00000021023	smarca4a	95	83.664	Astyanax_mexicanus
ENSMZEG00005023861	-	98	84.121	ENSBTAG00000019220	SMARCA4	94	86.271	Bos_taurus
ENSMZEG00005023861	-	95	89.811	ENSCJAG00000005936	SMARCA4	93	85.020	Callithrix_jacchus
ENSMZEG00005023861	-	98	83.982	ENSCAFG00000017584	SMARCA4	98	83.449	Canis_familiaris
ENSMZEG00005023861	-	94	89.343	ENSCAFG00020024620	SMARCA4	97	83.449	Canis_lupus_dingo
ENSMZEG00005023861	-	98	80.365	ENSCHIG00000015318	SMARCA4	94	82.465	Capra_hircus
ENSMZEG00005023861	-	98	84.184	ENSTSYG00000012966	SMARCA4	94	86.469	Carlito_syrichta
ENSMZEG00005023861	-	97	77.671	ENSCAPG00000015932	SMARCA4	94	89.688	Cavia_aperea
ENSMZEG00005023861	-	98	84.151	ENSCPOG00000015549	SMARCA4	98	83.891	Cavia_porcellus
ENSMZEG00005023861	-	98	81.647	ENSCCAG00000031660	SMARCA4	97	81.090	Cebus_capucinus
ENSMZEG00005023861	-	98	83.794	ENSCATG00000029530	SMARCA4	94	86.184	Cercocebus_atys
ENSMZEG00005023861	-	98	84.227	ENSCLAG00000011946	SMARCA4	98	83.712	Chinchilla_lanigera
ENSMZEG00005023861	-	98	84.121	ENSCPBG00000009994	SMARCA4	94	86.316	Chrysemys_picta_bellii
ENSMZEG00005023861	-	98	83.794	ENSCANG00000036013	SMARCA4	98	83.323	Colobus_angolensis_palliatus
ENSMZEG00005023861	-	98	83.731	ENSCGRG00001016732	Smarca4	94	86.053	Cricetulus_griseus_chok1gshd
ENSMZEG00005023861	-	98	83.731	ENSCGRG00000017242	Smarca4	94	86.128	Cricetulus_griseus_crigri
ENSMZEG00005023861	-	94	82.117	ENSCSEG00000014771	smarca4a	95	85.108	Cynoglossus_semilaevis
ENSMZEG00005023861	-	95	94.865	ENSCVAG00000003018	-	96	94.733	Cyprinodon_variegatus
ENSMZEG00005023861	-	98	83.702	ENSCVAG00000006979	smarca4a	95	85.038	Cyprinodon_variegatus
ENSMZEG00005023861	-	95	83.638	ENSDARG00000104339	SMARCA4	96	84.566	Danio_rerio
ENSMZEG00005023861	-	98	87.389	ENSDARG00000077226	smarca4a	95	87.136	Danio_rerio
ENSMZEG00005023861	-	94	84.163	ENSDNOG00000048847	SMARCA4	90	90.466	Dasypus_novemcinctus
ENSMZEG00005023861	-	88	79.106	ENSDORG00000002544	Smarca4	91	81.484	Dipodomys_ordii
ENSMZEG00005023861	-	97	73.000	ENSETEG00000013361	SMARCA4	94	74.354	Echinops_telfairi
ENSMZEG00005023861	-	94	88.434	ENSEASG00005006167	SMARCA4	94	84.180	Equus_asinus_asinus
ENSMZEG00005023861	-	98	83.857	ENSECAG00000008334	SMARCA4	94	86.184	Equus_caballus
ENSMZEG00005023861	-	95	82.787	ENSELUG00000023232	-	94	85.978	Esox_lucius
ENSMZEG00005023861	-	98	83.667	ENSELUG00000010247	smarca4a	95	82.999	Esox_lucius
ENSMZEG00005023861	-	98	83.887	ENSFCAG00000004894	SMARCA4	94	86.211	Felis_catus
ENSMZEG00005023861	-	95	80.759	ENSFALG00000004208	SMARCA4	94	83.433	Ficedula_albicollis
ENSMZEG00005023861	-	95	83.930	ENSFDAG00000012237	SMARCA4	97	86.397	Fukomys_damarensis
ENSMZEG00005023861	-	91	84.316	ENSFHEG00000010182	smarca4a	95	84.784	Fundulus_heteroclitus
ENSMZEG00005023861	-	98	95.145	ENSFHEG00000007902	-	95	95.082	Fundulus_heteroclitus
ENSMZEG00005023861	-	92	86.166	ENSGMOG00000005756	-	87	85.740	Gadus_morhua
ENSMZEG00005023861	-	87	82.301	ENSGMOG00000002649	smarca4a	88	85.827	Gadus_morhua
ENSMZEG00005023861	-	73	84.869	ENSGALG00000047145	SMARCA4	100	84.869	Gallus_gallus
ENSMZEG00005023861	-	84	88.767	ENSGAFG00000014900	smarca4a	92	88.881	Gambusia_affinis
ENSMZEG00005023861	-	98	86.629	ENSGAFG00000008827	-	93	88.533	Gambusia_affinis
ENSMZEG00005023861	-	91	84.615	ENSGACG00000006691	smarca4a	95	83.649	Gasterosteus_aculeatus
ENSMZEG00005023861	-	98	87.132	ENSGACG00000016033	-	96	86.946	Gasterosteus_aculeatus
ENSMZEG00005023861	-	98	84.343	ENSGAGG00000016757	SMARCA4	94	86.552	Gopherus_agassizii
ENSMZEG00005023861	-	98	83.794	ENSGGOG00000009882	SMARCA4	94	86.184	Gorilla_gorilla
ENSMZEG00005023861	-	98	84.820	ENSHBUG00000021172	smarca4a	95	86.094	Haplochromis_burtoni
ENSMZEG00005023861	-	99	99.875	ENSHBUG00000005447	-	97	99.875	Haplochromis_burtoni
ENSMZEG00005023861	-	98	83.845	ENSHGLG00000010519	SMARCA4	98	83.083	Heterocephalus_glaber_female
ENSMZEG00005023861	-	98	83.982	ENSHGLG00100013774	SMARCA4	98	83.155	Heterocephalus_glaber_male
ENSMZEG00005023861	-	99	84.367	ENSHCOG00000009510	smarca4a	96	85.579	Hippocampus_comes
ENSMZEG00005023861	-	98	85.986	ENSIPUG00000006107	smarca4a	95	86.185	Ictalurus_punctatus
ENSMZEG00005023861	-	96	85.751	ENSIPUG00000016346	-	91	87.441	Ictalurus_punctatus
ENSMZEG00005023861	-	98	83.857	ENSSTOG00000007939	SMARCA4	94	86.250	Ictidomys_tridecemlineatus
ENSMZEG00005023861	-	98	82.031	ENSJJAG00000012877	Smarca4	94	83.902	Jaculus_jaculus
ENSMZEG00005023861	-	98	83.787	ENSKMAG00000011931	smarca4a	94	87.617	Kryptolebias_marmoratus
ENSMZEG00005023861	-	98	94.896	ENSKMAG00000019518	-	96	94.407	Kryptolebias_marmoratus
ENSMZEG00005023861	-	100	82.127	ENSLBEG00000017383	smarca4a	96	83.016	Labrus_bergylta
ENSMZEG00005023861	-	96	80.563	ENSLBEG00000020655	-	96	79.610	Labrus_bergylta
ENSMZEG00005023861	-	55	77.010	ENSLACG00000015309	SMARCA4	100	79.856	Latimeria_chalumnae
ENSMZEG00005023861	-	98	81.423	ENSLOCG00000007820	smarca4a	94	82.972	Lepisosteus_oculatus
ENSMZEG00005023861	-	98	83.824	ENSLAFG00000001433	SMARCA4	94	86.146	Loxodonta_africana
ENSMZEG00005023861	-	98	83.794	ENSMFAG00000032146	SMARCA4	93	86.184	Macaca_fascicularis
ENSMZEG00005023861	-	98	83.794	ENSMMUG00000012042	SMARCA4	90	91.858	Macaca_mulatta
ENSMZEG00005023861	-	98	84.151	ENSMNEG00000028512	SMARCA4	94	86.298	Macaca_nemestrina
ENSMZEG00005023861	-	98	83.794	ENSMLEG00000034976	SMARCA4	94	85.949	Mandrillus_leucophaeus
ENSMZEG00005023861	-	99	96.035	ENSMAMG00000002841	-	97	96.460	Mastacembelus_armatus
ENSMZEG00005023861	-	95	88.269	ENSMAMG00000009256	smarca4a	94	90.862	Mastacembelus_armatus
ENSMZEG00005023861	-	98	84.640	ENSMZEG00005003889	smarca4a	93	88.013	Maylandia_zebra
ENSMZEG00005023861	-	98	83.636	ENSMAUG00000020731	Smarca4	94	85.949	Mesocricetus_auratus
ENSMZEG00005023861	-	98	83.824	ENSMICG00000009806	SMARCA4	94	86.146	Microcebus_murinus
ENSMZEG00005023861	-	98	83.511	ENSMOCG00000022209	Smarca4	94	85.817	Microtus_ochrogaster
ENSMZEG00005023861	-	99	80.877	ENSMMOG00000007571	smarca4a	98	84.357	Mola_mola
ENSMZEG00005023861	-	98	86.747	ENSMMOG00000008466	-	93	89.607	Mola_mola
ENSMZEG00005023861	-	98	82.716	ENSMODG00000006287	SMARCA4	94	84.139	Monodelphis_domestica
ENSMZEG00005023861	-	90	90.592	ENSMALG00000021534	-	99	90.314	Monopterus_albus
ENSMZEG00005023861	-	94	84.303	ENSMALG00000003388	smarca4a	95	85.958	Monopterus_albus
ENSMZEG00005023861	-	98	83.606	MGP_CAROLIEiJ_G0031879	Smarca4	100	85.669	Mus_caroli
ENSMZEG00005023861	-	98	83.606	ENSMUSG00000032187	Smarca4	99	85.669	Mus_musculus
ENSMZEG00005023861	-	98	83.806	MGP_PahariEiJ_G0014745	Smarca4	100	85.692	Mus_pahari
ENSMZEG00005023861	-	98	83.606	MGP_SPRETEiJ_G0033003	Smarca4	100	85.669	Mus_spretus
ENSMZEG00005023861	-	98	83.920	ENSMPUG00000005711	SMARCA4	94	86.250	Mustela_putorius_furo
ENSMZEG00005023861	-	98	83.920	ENSMLUG00000004491	-	94	86.382	Myotis_lucifugus
ENSMZEG00005023861	-	98	84.227	ENSNGAG00000021852	Smarca4	94	85.884	Nannospalax_galili
ENSMZEG00005023861	-	98	82.573	ENSNBRG00000011457	smarca4a	95	84.453	Neolamprologus_brichardi
ENSMZEG00005023861	-	90	94.916	ENSNBRG00000018865	-	99	94.916	Neolamprologus_brichardi
ENSMZEG00005023861	-	98	80.251	ENSNLEG00000012389	SMARCA4	93	82.697	Nomascus_leucogenys
ENSMZEG00005023861	-	80	89.655	ENSOPRG00000000885	-	77	89.655	Ochotona_princeps
ENSMZEG00005023861	-	98	82.739	ENSODEG00000017127	SMARCA4	94	83.835	Octodon_degus
ENSMZEG00005023861	-	99	99.688	ENSONIG00000018040	-	97	99.688	Oreochromis_niloticus
ENSMZEG00005023861	-	98	84.436	ENSONIG00000008196	smarca4a	94	87.649	Oreochromis_niloticus
ENSMZEG00005023861	-	98	79.334	ENSOCUG00000001787	SMARCA4	98	78.549	Oryctolagus_cuniculus
ENSMZEG00005023861	-	94	83.268	ENSORLG00000015452	smarca4a	95	84.965	Oryzias_latipes
ENSMZEG00005023861	-	95	95.210	ENSORLG00000003955	-	95	94.997	Oryzias_latipes
ENSMZEG00005023861	-	95	95.213	ENSORLG00020009728	-	95	95.000	Oryzias_latipes_hni
ENSMZEG00005023861	-	94	83.136	ENSORLG00020004611	smarca4a	99	82.893	Oryzias_latipes_hni
ENSMZEG00005023861	-	98	94.427	ENSORLG00015007739	-	95	94.617	Oryzias_latipes_hsok
ENSMZEG00005023861	-	94	84.055	ENSORLG00015016560	smarca4a	98	84.896	Oryzias_latipes_hsok
ENSMZEG00005023861	-	98	84.791	ENSOMEG00000007486	smarca4a	95	85.253	Oryzias_melastigma
ENSMZEG00005023861	-	95	95.404	ENSOMEG00000016626	-	95	95.311	Oryzias_melastigma
ENSMZEG00005023861	-	90	84.088	ENSOGAG00000016148	SMARCA4	100	84.149	Otolemur_garnettii
ENSMZEG00005023861	-	98	83.753	ENSOARG00000017454	SMARCA4	91	86.332	Ovis_aries
ENSMZEG00005023861	-	98	83.794	ENSPPAG00000043191	SMARCA4	94	86.184	Pan_paniscus
ENSMZEG00005023861	-	98	83.887	ENSPPRG00000000064	SMARCA4	94	86.211	Panthera_pardus
ENSMZEG00005023861	-	91	87.089	ENSPTIG00000017447	SMARCA4	98	78.210	Panthera_tigris_altaica
ENSMZEG00005023861	-	98	83.794	ENSPTRG00000010488	SMARCA4	94	86.184	Pan_troglodytes
ENSMZEG00005023861	-	98	84.214	ENSPANG00000011042	SMARCA4	93	86.364	Papio_anubis
ENSMZEG00005023861	-	94	86.759	ENSPKIG00000010087	-	92	86.544	Paramormyrops_kingsleyae
ENSMZEG00005023861	-	98	87.547	ENSPKIG00000007770	SMARCA4	95	87.334	Paramormyrops_kingsleyae
ENSMZEG00005023861	-	94	77.094	ENSPSIG00000005547	SMARCA4	94	80.514	Pelodiscus_sinensis
ENSMZEG00005023861	-	98	83.511	ENSPEMG00000020389	Smarca4	94	85.817	Peromyscus_maniculatus_bairdii
ENSMZEG00005023861	-	98	84.320	ENSPCIG00000017138	SMARCA4	94	86.438	Phascolarctos_cinereus
ENSMZEG00005023861	-	98	94.203	ENSPFOG00000012930	-	95	94.644	Poecilia_formosa
ENSMZEG00005023861	-	98	83.887	ENSPFOG00000007892	smarca4a	95	84.181	Poecilia_formosa
ENSMZEG00005023861	-	79	97.941	ENSPLAG00000018616	-	95	92.459	Poecilia_latipinna
ENSMZEG00005023861	-	98	84.075	ENSPLAG00000014294	smarca4a	95	84.369	Poecilia_latipinna
ENSMZEG00005023861	-	100	94.358	ENSPMEG00000008929	-	98	94.544	Poecilia_mexicana
ENSMZEG00005023861	-	98	83.950	ENSPMEG00000003725	smarca4a	96	84.181	Poecilia_mexicana
ENSMZEG00005023861	-	100	94.321	ENSPREG00000014823	-	98	94.383	Poecilia_reticulata
ENSMZEG00005023861	-	98	81.353	ENSPREG00000014608	smarca4a	96	83.748	Poecilia_reticulata
ENSMZEG00005023861	-	98	82.277	ENSPPYG00000009568	SMARCA4	94	83.838	Pongo_abelii
ENSMZEG00005023861	-	78	90.110	ENSPCAG00000014054	SMARCA4	73	89.888	Procavia_capensis
ENSMZEG00005023861	-	98	83.857	ENSPCOG00000023011	SMARCA4	94	86.014	Propithecus_coquereli
ENSMZEG00005023861	-	93	74.301	ENSPVAG00000007787	SMARCA4	89	78.839	Pteropus_vampyrus
ENSMZEG00005023861	-	98	84.946	ENSPNYG00000000717	smarca4a	96	85.967	Pundamilia_nyererei
ENSMZEG00005023861	-	100	92.480	ENSPNYG00000023995	-	100	92.542	Pundamilia_nyererei
ENSMZEG00005023861	-	98	87.737	ENSPNAG00000006636	-	93	87.811	Pygocentrus_nattereri
ENSMZEG00005023861	-	93	90.592	ENSPNAG00000024136	smarca4a	94	81.634	Pygocentrus_nattereri
ENSMZEG00005023861	-	98	83.668	ENSRNOG00000009271	Smarca4	94	85.987	Rattus_norvegicus
ENSMZEG00005023861	-	98	83.731	ENSRBIG00000038696	SMARCA4	93	86.118	Rhinopithecus_bieti
ENSMZEG00005023861	-	98	83.794	ENSRROG00000045509	SMARCA4	94	86.184	Rhinopithecus_roxellana
ENSMZEG00005023861	-	98	83.794	ENSSBOG00000026896	SMARCA4	92	89.899	Saimiri_boliviensis_boliviensis
ENSMZEG00005023861	-	98	84.194	ENSSHAG00000001642	SMARCA4	94	86.307	Sarcophilus_harrisii
ENSMZEG00005023861	-	98	87.247	ENSSFOG00015013823	smarca4	95	86.464	Scleropages_formosus
ENSMZEG00005023861	-	94	82.745	ENSSFOG00015009921	-	87	91.322	Scleropages_formosus
ENSMZEG00005023861	-	98	91.803	ENSSMAG00000014082	-	98	93.680	Scophthalmus_maximus
ENSMZEG00005023861	-	98	84.355	ENSSMAG00000003200	smarca4a	95	84.524	Scophthalmus_maximus
ENSMZEG00005023861	-	99	96.599	ENSSDUG00000005388	-	99	96.599	Seriola_dumerili
ENSMZEG00005023861	-	98	80.528	ENSSDUG00000017298	smarca4a	94	83.454	Seriola_dumerili
ENSMZEG00005023861	-	98	82.432	ENSSLDG00000024486	smarca4a	100	84.388	Seriola_lalandi_dorsalis
ENSMZEG00005023861	-	94	97.209	ENSSLDG00000023663	-	96	97.209	Seriola_lalandi_dorsalis
ENSMZEG00005023861	-	58	97.516	ENSSARG00000013477	SMARCA4	77	97.516	Sorex_araneus
ENSMZEG00005023861	-	98	80.651	ENSSPUG00000004558	SMARCA4	98	81.242	Sphenodon_punctatus
ENSMZEG00005023861	-	98	82.141	ENSSPAG00000004248	smarca4a	95	85.141	Stegastes_partitus
ENSMZEG00005023861	-	99	96.246	ENSSPAG00000012533	-	97	96.246	Stegastes_partitus
ENSMZEG00005023861	-	98	83.950	ENSSSCG00000013629	SMARCA4	94	86.211	Sus_scrofa
ENSMZEG00005023861	-	53	84.442	ENSTGUG00000015488	-	98	84.304	Taeniopygia_guttata
ENSMZEG00005023861	-	92	79.732	ENSTRUG00000004885	smarca4a	100	80.150	Takifugu_rubripes
ENSMZEG00005023861	-	98	92.513	ENSTRUG00000001378	SMARCA4	98	92.449	Takifugu_rubripes
ENSMZEG00005023861	-	99	91.588	ENSTNIG00000004536	SMARCA4	95	92.030	Tetraodon_nigroviridis
ENSMZEG00005023861	-	73	83.688	ENSTNIG00000004859	-	100	83.688	Tetraodon_nigroviridis
ENSMZEG00005023861	-	51	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSMZEG00005023861	-	98	81.678	ENSTTRG00000009519	SMARCA4	94	83.237	Tursiops_truncatus
ENSMZEG00005023861	-	98	83.982	ENSUAMG00000014661	SMARCA4	94	86.316	Ursus_americanus
ENSMZEG00005023861	-	94	91.113	ENSUMAG00000022005	SMARCA4	95	90.866	Ursus_maritimus
ENSMZEG00005023861	-	98	83.982	ENSVVUG00000017820	SMARCA4	91	86.316	Vulpes_vulpes
ENSMZEG00005023861	-	99	78.780	ENSXETG00000009355	smarca4	99	82.006	Xenopus_tropicalis
ENSMZEG00005023861	-	98	87.318	ENSXCOG00000013494	-	93	90.625	Xiphophorus_couchianus
ENSMZEG00005023861	-	98	83.354	ENSXMAG00000006321	smarca4a	100	83.634	Xiphophorus_maculatus
ENSMZEG00005023861	-	98	94.994	ENSXMAG00000007030	-	95	95.247	Xiphophorus_maculatus