EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023895 (Gene tree)
Gene ID: 101486369
Gene Symbol: utp6
Alias: zgc:55648
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 15568 bases
Position: chrLG6:22947274-22962841
Accession: 101486369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005032048	U3_assoc_6	PF08640.11	9.3e-25	1	1
ENSMZEP00005032049	U3_assoc_6	PF08640.11	9.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005033086	-	1794	-	ENSMZEP00005032049	597 (aa)	-	-
ENSMZET00005033085	-	4614	XM_004567817	ENSMZEP00005032048	595 (aa)	XP_004567874	UPI000329BED3

Gene Model

Click here to download ENSMZEG00005023895's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023895	utp6	100	57.119	ENSG00000108651	UTP6	100	57.119	Homo_sapiens
ENSMZEG00005023895	utp6	100	90.588	ENSAPOG00000000435	utp6	100	90.588	Acanthochromis_polyacanthus
ENSMZEG00005023895	utp6	99	56.208	ENSAMEG00000005443	UTP6	99	56.208	Ailuropoda_melanoleuca
ENSMZEG00005023895	utp6	100	91.765	ENSACIG00000004124	utp6	100	91.765	Amphilophus_citrinellus
ENSMZEG00005023895	utp6	100	89.580	ENSAOCG00000016812	utp6	100	89.580	Amphiprion_ocellaris
ENSMZEG00005023895	utp6	100	89.580	ENSAPEG00000023565	utp6	100	89.580	Amphiprion_percula
ENSMZEG00005023895	utp6	100	89.412	ENSATEG00000003401	utp6	100	89.412	Anabas_testudineus
ENSMZEG00005023895	utp6	99	57.770	ENSAPLG00000005821	UTP6	99	57.770	Anas_platyrhynchos
ENSMZEG00005023895	utp6	100	60.302	ENSACAG00000009472	UTP6	100	60.302	Anolis_carolinensis
ENSMZEG00005023895	utp6	100	56.784	ENSANAG00000034603	UTP6	100	56.784	Aotus_nancymaae
ENSMZEG00005023895	utp6	100	100.000	ENSACLG00000006728	utp6	100	100.000	Astatotilapia_calliptera
ENSMZEG00005023895	utp6	100	72.773	ENSAMXG00000009478	utp6	100	72.773	Astyanax_mexicanus
ENSMZEG00005023895	utp6	100	53.010	ENSBTAG00000015612	UTP6	100	53.010	Bos_taurus
ENSMZEG00005023895	utp6	100	51.505	ENSBTAG00000003769	-	98	51.505	Bos_taurus
ENSMZEG00005023895	utp6	100	56.616	ENSCJAG00000014115	UTP6	100	56.616	Callithrix_jacchus
ENSMZEG00005023895	utp6	100	57.191	ENSCAFG00000018507	UTP6	100	57.191	Canis_familiaris
ENSMZEG00005023895	utp6	100	57.191	ENSCAFG00020014678	UTP6	100	57.191	Canis_lupus_dingo
ENSMZEG00005023895	utp6	100	52.843	ENSCHIG00000009726	-	100	52.843	Capra_hircus
ENSMZEG00005023895	utp6	100	53.010	ENSCHIG00000017954	-	100	53.010	Capra_hircus
ENSMZEG00005023895	utp6	99	51.926	ENSTSYG00000002202	UTP6	99	51.926	Carlito_syrichta
ENSMZEG00005023895	utp6	86	50.097	ENSCAPG00000017595	UTP6	93	50.097	Cavia_aperea
ENSMZEG00005023895	utp6	99	57.383	ENSCPOG00000014294	UTP6	100	57.383	Cavia_porcellus
ENSMZEG00005023895	utp6	100	52.429	ENSCCAG00000033318	-	100	52.429	Cebus_capucinus
ENSMZEG00005023895	utp6	100	56.856	ENSCATG00000034868	UTP6	100	56.856	Cercocebus_atys
ENSMZEG00005023895	utp6	99	57.215	ENSCLAG00000007274	UTP6	99	57.215	Chinchilla_lanigera
ENSMZEG00005023895	utp6	100	56.187	ENSCSAG00000006595	UTP6	100	56.187	Chlorocebus_sabaeus
ENSMZEG00005023895	utp6	73	48.750	ENSCHOG00000010940	-	73	48.750	Choloepus_hoffmanni
ENSMZEG00005023895	utp6	100	60.804	ENSCPBG00000004652	UTP6	100	60.804	Chrysemys_picta_bellii
ENSMZEG00005023895	utp6	99	32.300	ENSCING00000022947	-	99	32.300	Ciona_intestinalis
ENSMZEG00005023895	utp6	54	37.615	ENSCSAVG00000011416	-	99	37.615	Ciona_savignyi
ENSMZEG00005023895	utp6	88	40.684	ENSCANG00000031141	UTP6	90	40.684	Colobus_angolensis_palliatus
ENSMZEG00005023895	utp6	99	56.449	ENSCGRG00001000046	Utp6	100	56.449	Cricetulus_griseus_chok1gshd
ENSMZEG00005023895	utp6	95	55.124	ENSCGRG00000011543	Utp6	100	55.124	Cricetulus_griseus_crigri
ENSMZEG00005023895	utp6	100	76.756	ENSCSEG00000013422	utp6	100	91.803	Cynoglossus_semilaevis
ENSMZEG00005023895	utp6	100	85.714	ENSCVAG00000020322	utp6	100	85.714	Cyprinodon_variegatus
ENSMZEG00005023895	utp6	100	72.101	ENSDARG00000098433	utp6	100	79.006	Danio_rerio
ENSMZEG00005023895	utp6	100	56.856	ENSDNOG00000037018	UTP6	100	56.856	Dasypus_novemcinctus
ENSMZEG00005023895	utp6	95	54.867	ENSDORG00000003843	Utp6	99	57.353	Dipodomys_ordii
ENSMZEG00005023895	utp6	100	57.023	ENSEASG00005010870	UTP6	100	57.023	Equus_asinus_asinus
ENSMZEG00005023895	utp6	100	57.023	ENSECAG00000022217	UTP6	100	57.023	Equus_caballus
ENSMZEG00005023895	utp6	100	75.966	ENSELUG00000006618	utp6	100	75.966	Esox_lucius
ENSMZEG00005023895	utp6	100	55.000	ENSFCAG00000015795	UTP6	100	55.000	Felis_catus
ENSMZEG00005023895	utp6	100	60.637	ENSFALG00000002282	UTP6	100	60.637	Ficedula_albicollis
ENSMZEG00005023895	utp6	99	57.550	ENSFDAG00000019506	UTP6	100	57.550	Fukomys_damarensis
ENSMZEG00005023895	utp6	100	85.042	ENSFHEG00000010373	utp6	100	85.042	Fundulus_heteroclitus
ENSMZEG00005023895	utp6	100	76.639	ENSGMOG00000011958	utp6	100	76.639	Gadus_morhua
ENSMZEG00005023895	utp6	100	59.799	ENSGALG00000003260	UTP6	100	59.799	Gallus_gallus
ENSMZEG00005023895	utp6	100	86.555	ENSGAFG00000008505	utp6	100	86.555	Gambusia_affinis
ENSMZEG00005023895	utp6	100	85.042	ENSGACG00000019424	utp6	100	85.042	Gasterosteus_aculeatus
ENSMZEG00005023895	utp6	100	60.972	ENSGAGG00000004820	UTP6	100	60.972	Gopherus_agassizii
ENSMZEG00005023895	utp6	100	46.477	ENSGGOG00000026003	-	100	46.477	Gorilla_gorilla
ENSMZEG00005023895	utp6	100	57.454	ENSGGOG00000013569	UTP6	100	57.454	Gorilla_gorilla
ENSMZEG00005023895	utp6	100	100.000	ENSHBUG00000018668	utp6	100	100.000	Haplochromis_burtoni
ENSMZEG00005023895	utp6	99	57.215	ENSHGLG00000010332	UTP6	100	57.215	Heterocephalus_glaber_female
ENSMZEG00005023895	utp6	99	52.951	ENSHGLG00000008642	-	99	52.951	Heterocephalus_glaber_female
ENSMZEG00005023895	utp6	95	53.873	ENSHGLG00100006047	-	99	53.873	Heterocephalus_glaber_male
ENSMZEG00005023895	utp6	99	54.195	ENSHGLG00100014271	-	100	54.195	Heterocephalus_glaber_male
ENSMZEG00005023895	utp6	100	79.664	ENSHCOG00000017277	utp6	100	79.664	Hippocampus_comes
ENSMZEG00005023895	utp6	100	71.765	ENSIPUG00000022587	Utp6	100	71.765	Ictalurus_punctatus
ENSMZEG00005023895	utp6	99	58.027	ENSSTOG00000015875	UTP6	100	58.027	Ictidomys_tridecemlineatus
ENSMZEG00005023895	utp6	100	86.555	ENSKMAG00000021631	utp6	100	86.555	Kryptolebias_marmoratus
ENSMZEG00005023895	utp6	100	87.395	ENSLBEG00000002115	utp6	100	87.395	Labrus_bergylta
ENSMZEG00005023895	utp6	100	63.652	ENSLACG00000017158	UTP6	100	63.652	Latimeria_chalumnae
ENSMZEG00005023895	utp6	91	68.440	ENSLOCG00000013797	utp6	90	68.440	Lepisosteus_oculatus
ENSMZEG00005023895	utp6	100	55.760	ENSLAFG00000013008	UTP6	100	55.760	Loxodonta_africana
ENSMZEG00005023895	utp6	100	56.856	ENSMFAG00000038842	UTP6	100	56.856	Macaca_fascicularis
ENSMZEG00005023895	utp6	85	47.291	ENSMFAG00000041904	-	96	47.291	Macaca_fascicularis
ENSMZEG00005023895	utp6	100	56.856	ENSMMUG00000020403	UTP6	100	56.856	Macaca_mulatta
ENSMZEG00005023895	utp6	100	56.856	ENSMNEG00000039480	UTP6	100	56.856	Macaca_nemestrina
ENSMZEG00005023895	utp6	100	51.003	ENSMLEG00000032174	UTP6	100	51.003	Mandrillus_leucophaeus
ENSMZEG00005023895	utp6	100	44.147	ENSMLEG00000039364	-	100	44.147	Mandrillus_leucophaeus
ENSMZEG00005023895	utp6	100	88.908	ENSMAMG00000002228	utp6	99	88.908	Mastacembelus_armatus
ENSMZEG00005023895	utp6	95	58.451	ENSMGAG00000008111	UTP6	100	58.451	Meleagris_gallopavo
ENSMZEG00005023895	utp6	99	56.114	ENSMAUG00000021895	Utp6	100	56.114	Mesocricetus_auratus
ENSMZEG00005023895	utp6	100	55.426	ENSMICG00000002632	UTP6	100	55.426	Microcebus_murinus
ENSMZEG00005023895	utp6	99	56.281	ENSMOCG00000014163	Utp6	100	56.281	Microtus_ochrogaster
ENSMZEG00005023895	utp6	100	82.017	ENSMMOG00000008653	utp6	100	88.889	Mola_mola
ENSMZEG00005023895	utp6	100	58.027	ENSMODG00000019206	UTP6	100	58.027	Monodelphis_domestica
ENSMZEG00005023895	utp6	100	89.244	ENSMALG00000021112	utp6	100	89.244	Monopterus_albus
ENSMZEG00005023895	utp6	99	56.784	MGP_CAROLIEiJ_G0016828	Utp6	100	56.784	Mus_caroli
ENSMZEG00005023895	utp6	99	57.119	ENSMUSG00000035575	Utp6	100	57.119	Mus_musculus
ENSMZEG00005023895	utp6	99	53.099	MGP_PahariEiJ_G0017965	Utp6	100	53.099	Mus_pahari
ENSMZEG00005023895	utp6	99	56.616	MGP_SPRETEiJ_G0017672	Utp6	100	56.616	Mus_spretus
ENSMZEG00005023895	utp6	100	55.150	ENSMPUG00000014581	UTP6	100	55.150	Mustela_putorius_furo
ENSMZEG00005023895	utp6	100	57.023	ENSMLUG00000016422	UTP6	100	57.023	Myotis_lucifugus
ENSMZEG00005023895	utp6	99	57.023	ENSNGAG00000015482	Utp6	100	57.023	Nannospalax_galili
ENSMZEG00005023895	utp6	100	99.496	ENSNBRG00000019714	utp6	100	99.496	Neolamprologus_brichardi
ENSMZEG00005023895	utp6	100	56.114	ENSNLEG00000011009	UTP6	100	56.114	Nomascus_leucogenys
ENSMZEG00005023895	utp6	88	58.156	ENSOPRG00000008446	-	89	58.156	Ochotona_princeps
ENSMZEG00005023895	utp6	66	60.759	ENSODEG00000011971	UTP6	99	60.759	Octodon_degus
ENSMZEG00005023895	utp6	100	97.479	ENSONIG00000018090	utp6	100	97.479	Oreochromis_niloticus
ENSMZEG00005023895	utp6	98	57.143	ENSOANG00000004279	UTP6	99	57.143	Ornithorhynchus_anatinus
ENSMZEG00005023895	utp6	99	55.611	ENSOCUG00000016980	UTP6	99	55.611	Oryctolagus_cuniculus
ENSMZEG00005023895	utp6	99	84.512	ENSORLG00000003546	utp6	64	84.512	Oryzias_latipes
ENSMZEG00005023895	utp6	99	84.512	ENSORLG00020010377	utp6	99	84.512	Oryzias_latipes_hni
ENSMZEG00005023895	utp6	99	84.175	ENSORLG00015008893	utp6	99	84.175	Oryzias_latipes_hsok
ENSMZEG00005023895	utp6	100	85.210	ENSOMEG00000017487	utp6	100	85.210	Oryzias_melastigma
ENSMZEG00005023895	utp6	87	49.524	ENSOGAG00000004511	UTP6	100	49.333	Otolemur_garnettii
ENSMZEG00005023895	utp6	100	53.177	ENSOARG00000013474	UTP6	100	53.177	Ovis_aries
ENSMZEG00005023895	utp6	100	57.286	ENSPPAG00000038089	UTP6	100	57.286	Pan_paniscus
ENSMZEG00005023895	utp6	100	46.644	ENSPPAG00000016895	-	100	46.644	Pan_paniscus
ENSMZEG00005023895	utp6	100	57.429	ENSPPRG00000001010	UTP6	100	57.429	Panthera_pardus
ENSMZEG00005023895	utp6	100	57.262	ENSPTIG00000013913	UTP6	100	57.262	Panthera_tigris_altaica
ENSMZEG00005023895	utp6	100	46.477	ENSPTRG00000044798	-	100	46.477	Pan_troglodytes
ENSMZEG00005023895	utp6	100	57.286	ENSPTRG00000008977	UTP6	100	57.286	Pan_troglodytes
ENSMZEG00005023895	utp6	100	55.092	ENSPANG00000023113	UTP6	100	55.092	Papio_anubis
ENSMZEG00005023895	utp6	99	43.886	ENSPANG00000034274	-	100	43.886	Papio_anubis
ENSMZEG00005023895	utp6	100	70.401	ENSPKIG00000004653	utp6	100	70.401	Paramormyrops_kingsleyae
ENSMZEG00005023895	utp6	100	60.738	ENSPSIG00000012435	UTP6	100	60.738	Pelodiscus_sinensis
ENSMZEG00005023895	utp6	100	85.378	ENSPMGG00000009548	utp6	100	85.378	Periophthalmus_magnuspinnatus
ENSMZEG00005023895	utp6	99	55.853	ENSPEMG00000014081	Utp6	100	55.853	Peromyscus_maniculatus_bairdii
ENSMZEG00005023895	utp6	93	45.567	ENSPMAG00000009561	utp6	100	45.567	Petromyzon_marinus
ENSMZEG00005023895	utp6	100	60.469	ENSPCIG00000029968	UTP6	86	60.469	Phascolarctos_cinereus
ENSMZEG00005023895	utp6	100	85.882	ENSPFOG00000013918	utp6	100	85.882	Poecilia_formosa
ENSMZEG00005023895	utp6	100	85.714	ENSPLAG00000017825	utp6	100	85.714	Poecilia_latipinna
ENSMZEG00005023895	utp6	100	86.050	ENSPMEG00000008133	utp6	100	86.050	Poecilia_mexicana
ENSMZEG00005023895	utp6	100	83.025	ENSPREG00000013108	utp6	99	83.025	Poecilia_reticulata
ENSMZEG00005023895	utp6	100	54.271	ENSPPYG00000008154	UTP6	100	54.271	Pongo_abelii
ENSMZEG00005023895	utp6	100	55.593	ENSPCOG00000010224	UTP6	100	55.593	Propithecus_coquereli
ENSMZEG00005023895	utp6	100	54.090	ENSPVAG00000015759	UTP6	100	54.090	Pteropus_vampyrus
ENSMZEG00005023895	utp6	100	99.664	ENSPNYG00000002290	utp6	100	99.664	Pundamilia_nyererei
ENSMZEG00005023895	utp6	100	69.076	ENSPNAG00000027370	utp6	100	69.076	Pygocentrus_nattereri
ENSMZEG00005023895	utp6	99	56.114	ENSRNOG00000014209	Utp6	100	56.114	Rattus_norvegicus
ENSMZEG00005023895	utp6	100	56.689	ENSRBIG00000020822	UTP6	100	56.689	Rhinopithecus_bieti
ENSMZEG00005023895	utp6	100	56.689	ENSRROG00000036838	UTP6	100	56.689	Rhinopithecus_roxellana
ENSMZEG00005023895	utp6	100	72.074	ENSSFOG00015005978	utp6	100	72.074	Scleropages_formosus
ENSMZEG00005023895	utp6	100	88.571	ENSSMAG00000014772	utp6	100	88.571	Scophthalmus_maximus
ENSMZEG00005023895	utp6	100	90.420	ENSSDUG00000000329	utp6	100	90.420	Seriola_dumerili
ENSMZEG00005023895	utp6	100	89.580	ENSSLDG00000016724	utp6	100	89.580	Seriola_lalandi_dorsalis
ENSMZEG00005023895	utp6	99	50.839	ENSSARG00000010778	UTP6	99	50.839	Sorex_araneus
ENSMZEG00005023895	utp6	100	60.972	ENSSPUG00000005273	UTP6	100	60.972	Sphenodon_punctatus
ENSMZEG00005023895	utp6	100	87.395	ENSSPAG00000011871	utp6	99	87.395	Stegastes_partitus
ENSMZEG00005023895	utp6	100	57.262	ENSSSCG00000017745	UTP6	100	57.262	Sus_scrofa
ENSMZEG00005023895	utp6	100	60.201	ENSTGUG00000004999	UTP6	100	60.201	Taeniopygia_guttata
ENSMZEG00005023895	utp6	99	82.828	ENSTRUG00000012005	utp6	100	82.828	Takifugu_rubripes
ENSMZEG00005023895	utp6	99	82.492	ENSTNIG00000003235	utp6	100	82.492	Tetraodon_nigroviridis
ENSMZEG00005023895	utp6	68	57.459	ENSTBEG00000005388	-	67	57.459	Tupaia_belangeri
ENSMZEG00005023895	utp6	100	56.187	ENSTTRG00000009911	UTP6	100	56.187	Tursiops_truncatus
ENSMZEG00005023895	utp6	99	56.208	ENSUMAG00000015139	UTP6	99	56.208	Ursus_maritimus
ENSMZEG00005023895	utp6	100	56.856	ENSVPAG00000005782	UTP6	100	56.856	Vicugna_pacos
ENSMZEG00005023895	utp6	100	57.191	ENSVVUG00000012238	UTP6	100	57.191	Vulpes_vulpes
ENSMZEG00005023895	utp6	100	50.586	ENSXETG00000020057	utp6	100	50.586	Xenopus_tropicalis
ENSMZEG00005023895	utp6	100	85.260	ENSXCOG00000013626	utp6	100	95.946	Xiphophorus_couchianus
ENSMZEG00005023895	utp6	100	85.378	ENSXMAG00000017414	utp6	100	85.378	Xiphophorus_maculatus