EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005023905 (Gene tree)
Gene ID: 101482087
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 24641 bases
Position: chrLG6:23140635-23165275
Accession: 101482087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005032067	Ago_hook	PF10427.9	5.2e-07	1	1
ENSMZEP00005032067	RRM_1	PF00076.22	0.00023	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005033104	-	5577	XM_004567800	ENSMZEP00005032067	1858 (aa)	XP_004567857	-

Gene Model

Click here to download ENSMZEG00005023905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005023905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005023905	tnrc6c2	99	88.490	ENSAOCG00000017648	tnrc6c2	99	88.437	Amphiprion_ocellaris
ENSMZEG00005023905	tnrc6c2	83	89.956	ENSATEG00000003656	tnrc6c2	100	89.956	Anabas_testudineus
ENSMZEG00005023905	tnrc6c2	100	99.946	ENSACLG00000006469	tnrc6c2	100	99.946	Astatotilapia_calliptera
ENSMZEG00005023905	tnrc6c2	88	58.795	ENSAMXG00000009579	tnrc6c2	100	56.837	Astyanax_mexicanus
ENSMZEG00005023905	tnrc6c2	93	57.175	ENSDARG00000103851	tnrc6c2	100	55.542	Danio_rerio
ENSMZEG00005023905	tnrc6c2	88	60.988	ENSELUG00000007206	tnrc6c2	97	74.227	Esox_lucius
ENSMZEG00005023905	tnrc6c2	84	56.516	ENSELUG00000008149	-	98	80.758	Esox_lucius
ENSMZEG00005023905	tnrc6c2	93	81.520	ENSFHEG00000003901	tnrc6c2	100	83.222	Fundulus_heteroclitus
ENSMZEG00005023905	tnrc6c2	99	67.808	ENSGACG00000019401	tnrc6c2	100	74.200	Gasterosteus_aculeatus
ENSMZEG00005023905	tnrc6c2	100	99.839	ENSHBUG00000018310	tnrc6c2	100	99.839	Haplochromis_burtoni
ENSMZEG00005023905	tnrc6c2	99	78.251	ENSHCOG00000017802	tnrc6c2	99	77.582	Hippocampus_comes
ENSMZEG00005023905	tnrc6c2	88	54.399	ENSIPUG00000022767	tnrc6c2	100	52.330	Ictalurus_punctatus
ENSMZEG00005023905	tnrc6c2	88	88.740	ENSMAMG00000001718	tnrc6c2	100	88.375	Mastacembelus_armatus
ENSMZEG00005023905	tnrc6c2	88	86.353	ENSMALG00000020932	tnrc6c2	100	86.534	Monopterus_albus
ENSMZEG00005023905	tnrc6c2	84	99.384	ENSNBRG00000000452	tnrc6c2	57	95.022	Neolamprologus_brichardi
ENSMZEG00005023905	tnrc6c2	86	92.835	ENSONIG00000018123	tnrc6c2	100	92.955	Oreochromis_niloticus
ENSMZEG00005023905	tnrc6c2	99	81.044	ENSORLG00000003327	tnrc6c2	99	81.360	Oryzias_latipes
ENSMZEG00005023905	tnrc6c2	99	81.424	ENSORLG00020010730	tnrc6c2	99	81.424	Oryzias_latipes_hni
ENSMZEG00005023905	tnrc6c2	99	81.478	ENSORLG00015009232	tnrc6c2	98	81.156	Oryzias_latipes_hsok
ENSMZEG00005023905	tnrc6c2	99	82.513	ENSOMEG00000017952	tnrc6c2	99	82.193	Oryzias_melastigma
ENSMZEG00005023905	tnrc6c2	92	77.436	ENSPFOG00000011590	tnrc6c2	99	77.119	Poecilia_formosa
ENSMZEG00005023905	tnrc6c2	99	82.149	ENSPMEG00000012946	tnrc6c2	98	83.381	Poecilia_mexicana
ENSMZEG00005023905	tnrc6c2	88	79.360	ENSPREG00000015823	tnrc6c2	61	87.987	Poecilia_reticulata
ENSMZEG00005023905	tnrc6c2	88	99.511	ENSPNYG00000002582	tnrc6c2	100	99.511	Pundamilia_nyererei
ENSMZEG00005023905	tnrc6c2	88	57.788	ENSPNAG00000026838	tnrc6c2	100	57.594	Pygocentrus_nattereri
ENSMZEG00005023905	tnrc6c2	88	85.576	ENSSMAG00000015145	tnrc6c2	100	85.879	Scophthalmus_maximus
ENSMZEG00005023905	tnrc6c2	88	90.262	ENSSDUG00000020741	tnrc6c2	100	90.566	Seriola_dumerili
ENSMZEG00005023905	tnrc6c2	88	89.957	ENSSLDG00000002077	tnrc6c2	100	90.262	Seriola_lalandi_dorsalis
ENSMZEG00005023905	tnrc6c2	99	89.727	ENSSPAG00000013052	tnrc6c2	99	89.834	Stegastes_partitus
ENSMZEG00005023905	tnrc6c2	85	85.011	ENSTNIG00000004178	tnrc6c2	94	84.573	Tetraodon_nigroviridis
ENSMZEG00005023905	tnrc6c2	88	83.961	ENSXMAG00000006739	tnrc6c2	100	84.386	Xiphophorus_maculatus