EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005024385 (Gene tree)
Gene ID: 101477252
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 2179 bases
Position: chrLG14:31775624-31777802
Accession: 101477252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005032741	SBDS	PF01172.18	5e-34	1	1
ENSMZEP00005032741	SBDS_C	PF09377.10	2.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005033800	-	750	XM_004569580	ENSMZEP00005032741	249 (aa)	XP_004569637	UPI00032999BA

Gene Model

Click here to download ENSMZEG00005024385's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005024385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005024385	sbds	100	83.936	ENSG00000126524	SBDS	97	89.157	Homo_sapiens
ENSMZEG00005024385	sbds	100	97.590	ENSAPOG00000014285	sbds	100	97.590	Acanthochromis_polyacanthus
ENSMZEG00005024385	sbds	100	83.936	ENSAMEG00000018167	SBDS	99	83.936	Ailuropoda_melanoleuca
ENSMZEG00005024385	sbds	100	98.016	ENSACIG00000007308	sbds	100	98.016	Amphilophus_citrinellus
ENSMZEG00005024385	sbds	100	97.590	ENSAOCG00000016770	sbds	100	97.590	Amphiprion_ocellaris
ENSMZEG00005024385	sbds	100	97.992	ENSAPEG00000015897	sbds	100	97.992	Amphiprion_percula
ENSMZEG00005024385	sbds	100	97.189	ENSATEG00000006901	sbds	100	97.189	Anabas_testudineus
ENSMZEG00005024385	sbds	93	77.489	ENSANAG00000024342	-	95	79.518	Aotus_nancymaae
ENSMZEG00005024385	sbds	83	83.010	ENSANAG00000037501	-	99	83.010	Aotus_nancymaae
ENSMZEG00005024385	sbds	100	100.000	ENSACLG00000018750	sbds	100	100.000	Astatotilapia_calliptera
ENSMZEG00005024385	sbds	100	91.165	ENSAMXG00000005361	sbds	99	91.165	Astyanax_mexicanus
ENSMZEG00005024385	sbds	100	84.337	ENSBTAG00000004051	SBDS	99	84.337	Bos_taurus
ENSMZEG00005024385	sbds	98	58.537	WBGene00021063	sbds-1	97	58.537	Caenorhabditis_elegans
ENSMZEG00005024385	sbds	100	83.936	ENSCJAG00000041007	SBDS	99	83.936	Callithrix_jacchus
ENSMZEG00005024385	sbds	100	82.072	ENSCAFG00000010797	SBDS	99	82.072	Canis_familiaris
ENSMZEG00005024385	sbds	100	83.936	ENSCAFG00020005357	SBDS	99	83.936	Canis_lupus_dingo
ENSMZEG00005024385	sbds	100	84.337	ENSCHIG00000026854	SBDS	99	84.337	Capra_hircus
ENSMZEG00005024385	sbds	100	83.936	ENSTSYG00000033822	SBDS	99	83.936	Carlito_syrichta
ENSMZEG00005024385	sbds	65	82.822	ENSCAPG00000006634	SBDS	99	82.822	Cavia_aperea
ENSMZEG00005024385	sbds	100	85.141	ENSCPOG00000036143	SBDS	99	85.141	Cavia_porcellus
ENSMZEG00005024385	sbds	100	83.936	ENSCCAG00000020671	SBDS	99	83.936	Cebus_capucinus
ENSMZEG00005024385	sbds	100	83.936	ENSCATG00000039026	SBDS	99	83.936	Cercocebus_atys
ENSMZEG00005024385	sbds	100	85.542	ENSCLAG00000005721	-	99	85.542	Chinchilla_lanigera
ENSMZEG00005024385	sbds	99	60.081	ENSCLAG00000002113	-	99	60.081	Chinchilla_lanigera
ENSMZEG00005024385	sbds	100	83.936	ENSCSAG00000018275	SBDS	99	83.936	Chlorocebus_sabaeus
ENSMZEG00005024385	sbds	100	79.116	ENSCHOG00000003795	SBDS	99	79.116	Choloepus_hoffmanni
ENSMZEG00005024385	sbds	100	86.747	ENSCPBG00000014893	SBDS	99	86.747	Chrysemys_picta_bellii
ENSMZEG00005024385	sbds	99	67.742	ENSCSAVG00000011811	-	99	67.742	Ciona_savignyi
ENSMZEG00005024385	sbds	100	83.534	ENSCANG00000032368	SBDS	99	83.534	Colobus_angolensis_palliatus
ENSMZEG00005024385	sbds	65	82.822	ENSCGRG00001019886	Sbds	99	82.822	Cricetulus_griseus_chok1gshd
ENSMZEG00005024385	sbds	83	84.466	ENSCGRG00000009211	Sbds	99	84.466	Cricetulus_griseus_crigri
ENSMZEG00005024385	sbds	100	94.779	ENSCSEG00000005798	sbds	100	94.779	Cynoglossus_semilaevis
ENSMZEG00005024385	sbds	100	95.582	ENSCVAG00000001053	sbds	100	95.582	Cyprinodon_variegatus
ENSMZEG00005024385	sbds	100	89.157	ENSDARG00000027803	sbds	99	89.157	Danio_rerio
ENSMZEG00005024385	sbds	100	83.936	ENSDNOG00000041174	SBDS	99	83.936	Dasypus_novemcinctus
ENSMZEG00005024385	sbds	100	86.345	ENSDORG00000026218	Sbds	99	86.345	Dipodomys_ordii
ENSMZEG00005024385	sbds	91	62.719	FBgn0035714	CG8549	98	62.348	Drosophila_melanogaster
ENSMZEG00005024385	sbds	93	59.914	ENSEBUG00000015780	sbds	99	59.914	Eptatretus_burgeri
ENSMZEG00005024385	sbds	100	83.936	ENSEASG00005008821	SBDS	99	83.936	Equus_asinus_asinus
ENSMZEG00005024385	sbds	100	83.936	ENSECAG00000008202	SBDS	99	83.936	Equus_caballus
ENSMZEG00005024385	sbds	84	63.462	ENSEEUG00000004768	SBDS	100	63.462	Erinaceus_europaeus
ENSMZEG00005024385	sbds	100	91.968	ENSELUG00000008382	sbds	99	91.968	Esox_lucius
ENSMZEG00005024385	sbds	100	83.936	ENSFCAG00000022142	SBDS	99	83.936	Felis_catus
ENSMZEG00005024385	sbds	100	88.353	ENSFALG00000013808	SBDS	99	88.353	Ficedula_albicollis
ENSMZEG00005024385	sbds	100	85.141	ENSFDAG00000018947	-	99	85.141	Fukomys_damarensis
ENSMZEG00005024385	sbds	100	91.566	ENSFHEG00000000708	sbds	100	91.566	Fundulus_heteroclitus
ENSMZEG00005024385	sbds	100	91.968	ENSGMOG00000018356	sbds	99	91.968	Gadus_morhua
ENSMZEG00005024385	sbds	100	85.141	ENSGALG00000027989	SBDS	99	85.141	Gallus_gallus
ENSMZEG00005024385	sbds	92	91.739	ENSGAFG00000014204	sbds	100	91.739	Gambusia_affinis
ENSMZEG00005024385	sbds	100	92.771	ENSGACG00000012697	sbds	100	92.771	Gasterosteus_aculeatus
ENSMZEG00005024385	sbds	86	87.324	ENSGAGG00000022402	SBDS	99	87.324	Gopherus_agassizii
ENSMZEG00005024385	sbds	96	65.417	ENSGGOG00000040023	-	92	65.417	Gorilla_gorilla
ENSMZEG00005024385	sbds	100	100.000	ENSHBUG00000002660	sbds	100	100.000	Haplochromis_burtoni
ENSMZEG00005024385	sbds	100	83.534	ENSHGLG00000009671	SBDS	99	83.534	Heterocephalus_glaber_female
ENSMZEG00005024385	sbds	100	83.534	ENSHGLG00100011332	SBDS	99	83.534	Heterocephalus_glaber_male
ENSMZEG00005024385	sbds	100	90.361	ENSHCOG00000018606	sbds	100	90.361	Hippocampus_comes
ENSMZEG00005024385	sbds	100	89.960	ENSIPUG00000006536	sbds	99	89.960	Ictalurus_punctatus
ENSMZEG00005024385	sbds	99	82.591	ENSJJAG00000012033	-	99	82.591	Jaculus_jaculus
ENSMZEG00005024385	sbds	100	60.317	ENSJJAG00000003934	-	99	60.800	Jaculus_jaculus
ENSMZEG00005024385	sbds	100	95.984	ENSKMAG00000018542	sbds	100	95.984	Kryptolebias_marmoratus
ENSMZEG00005024385	sbds	100	93.574	ENSLBEG00000016687	sbds	100	93.574	Labrus_bergylta
ENSMZEG00005024385	sbds	100	74.308	ENSLACG00000018916	SBDS	99	74.308	Latimeria_chalumnae
ENSMZEG00005024385	sbds	100	90.361	ENSLOCG00000004073	sbds	99	90.361	Lepisosteus_oculatus
ENSMZEG00005024385	sbds	100	84.337	ENSLAFG00000008763	SBDS	99	84.337	Loxodonta_africana
ENSMZEG00005024385	sbds	100	83.936	ENSMFAG00000032620	SBDS	99	83.936	Macaca_fascicularis
ENSMZEG00005024385	sbds	100	83.936	ENSMMUG00000045653	SBDS	99	83.936	Macaca_mulatta
ENSMZEG00005024385	sbds	100	83.936	ENSMNEG00000031523	SBDS	99	83.936	Macaca_nemestrina
ENSMZEG00005024385	sbds	100	67.194	ENSMLEG00000036826	SBDS	99	67.194	Mandrillus_leucophaeus
ENSMZEG00005024385	sbds	100	97.590	ENSMAMG00000016062	sbds	100	97.590	Mastacembelus_armatus
ENSMZEG00005024385	sbds	100	85.141	ENSMGAG00000002119	SBDS	99	85.141	Meleagris_gallopavo
ENSMZEG00005024385	sbds	100	69.478	ENSMAUG00000022214	-	100	69.478	Mesocricetus_auratus
ENSMZEG00005024385	sbds	100	84.337	ENSMICG00000014366	SBDS	99	84.337	Microcebus_murinus
ENSMZEG00005024385	sbds	100	84.739	ENSMOCG00000011739	Sbds	99	84.739	Microtus_ochrogaster
ENSMZEG00005024385	sbds	100	84.400	ENSMMOG00000005061	sbds	100	84.400	Mola_mola
ENSMZEG00005024385	sbds	100	85.944	ENSMODG00000006644	SBDS	99	85.944	Monodelphis_domestica
ENSMZEG00005024385	sbds	100	92.771	ENSMALG00000010219	sbds	100	92.771	Monopterus_albus
ENSMZEG00005024385	sbds	100	85.542	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSMZEG00005024385	sbds	100	85.944	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSMZEG00005024385	sbds	100	85.542	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSMZEG00005024385	sbds	100	85.944	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSMZEG00005024385	sbds	67	84.431	ENSMPUG00000016192	SBDS	96	84.431	Mustela_putorius_furo
ENSMZEG00005024385	sbds	73	79.558	ENSMLUG00000013575	SBDS	99	79.558	Myotis_lucifugus
ENSMZEG00005024385	sbds	100	85.542	ENSNGAG00000012093	Sbds	99	85.542	Nannospalax_galili
ENSMZEG00005024385	sbds	100	100.000	ENSNBRG00000017027	sbds	100	100.000	Neolamprologus_brichardi
ENSMZEG00005024385	sbds	100	83.936	ENSNLEG00000013288	SBDS	99	83.936	Nomascus_leucogenys
ENSMZEG00005024385	sbds	100	85.141	ENSOPRG00000008721	SBDS	99	85.141	Ochotona_princeps
ENSMZEG00005024385	sbds	100	67.068	ENSODEG00000001116	-	99	67.068	Octodon_degus
ENSMZEG00005024385	sbds	100	76.707	ENSODEG00000019253	-	84	76.707	Octodon_degus
ENSMZEG00005024385	sbds	100	64.659	ENSODEG00000000137	-	84	67.470	Octodon_degus
ENSMZEG00005024385	sbds	100	99.197	ENSONIG00000005874	sbds	100	99.197	Oreochromis_niloticus
ENSMZEG00005024385	sbds	82	84.314	ENSOANG00000007674	-	99	84.314	Ornithorhynchus_anatinus
ENSMZEG00005024385	sbds	100	85.944	ENSOCUG00000003170	SBDS	99	85.944	Oryctolagus_cuniculus
ENSMZEG00005024385	sbds	100	93.173	ENSORLG00000023489	sbds	100	93.173	Oryzias_latipes
ENSMZEG00005024385	sbds	100	92.771	ENSORLG00020019282	sbds	100	92.771	Oryzias_latipes_hni
ENSMZEG00005024385	sbds	100	92.771	ENSORLG00015008005	sbds	100	92.771	Oryzias_latipes_hsok
ENSMZEG00005024385	sbds	100	93.976	ENSOMEG00000022747	sbds	100	93.976	Oryzias_melastigma
ENSMZEG00005024385	sbds	100	72.289	ENSOGAG00000015036	-	99	72.289	Otolemur_garnettii
ENSMZEG00005024385	sbds	100	84.739	ENSOGAG00000009011	-	99	84.739	Otolemur_garnettii
ENSMZEG00005024385	sbds	100	84.337	ENSOARG00000010609	SBDS	99	84.337	Ovis_aries
ENSMZEG00005024385	sbds	100	83.133	ENSPPAG00000043889	-	99	83.133	Pan_paniscus
ENSMZEG00005024385	sbds	100	83.936	ENSPPRG00000002307	SBDS	99	83.936	Panthera_pardus
ENSMZEG00005024385	sbds	100	83.936	ENSPTIG00000021308	SBDS	99	83.936	Panthera_tigris_altaica
ENSMZEG00005024385	sbds	100	83.936	ENSPTRG00000019254	SBDS	99	83.936	Pan_troglodytes
ENSMZEG00005024385	sbds	87	81.567	ENSPTRG00000048174	-	96	81.567	Pan_troglodytes
ENSMZEG00005024385	sbds	100	69.880	ENSPTRG00000047744	-	99	69.880	Pan_troglodytes
ENSMZEG00005024385	sbds	100	69.880	ENSPTRG00000050835	-	99	69.880	Pan_troglodytes
ENSMZEG00005024385	sbds	100	83.936	ENSPANG00000004078	SBDS	99	83.936	Papio_anubis
ENSMZEG00005024385	sbds	100	92.771	ENSPKIG00000006489	sbds	99	92.771	Paramormyrops_kingsleyae
ENSMZEG00005024385	sbds	83	85.024	ENSPSIG00000014603	SBDS	99	85.024	Pelodiscus_sinensis
ENSMZEG00005024385	sbds	100	97.189	ENSPMGG00000004246	sbds	100	97.189	Periophthalmus_magnuspinnatus
ENSMZEG00005024385	sbds	100	85.542	ENSPEMG00000008728	Sbds	99	85.542	Peromyscus_maniculatus_bairdii
ENSMZEG00005024385	sbds	100	85.944	ENSPCIG00000029718	SBDS	99	85.944	Phascolarctos_cinereus
ENSMZEG00005024385	sbds	100	93.976	ENSPFOG00000015837	sbds	100	93.976	Poecilia_formosa
ENSMZEG00005024385	sbds	100	94.378	ENSPLAG00000003641	sbds	100	94.378	Poecilia_latipinna
ENSMZEG00005024385	sbds	100	93.976	ENSPMEG00000019483	sbds	100	93.976	Poecilia_mexicana
ENSMZEG00005024385	sbds	100	93.976	ENSPREG00000018758	sbds	100	93.976	Poecilia_reticulata
ENSMZEG00005024385	sbds	100	83.936	ENSPPYG00000017513	SBDS	99	83.936	Pongo_abelii
ENSMZEG00005024385	sbds	100	83.936	ENSPCOG00000021098	SBDS	99	83.936	Propithecus_coquereli
ENSMZEG00005024385	sbds	100	84.337	ENSPVAG00000009369	SBDS	99	84.337	Pteropus_vampyrus
ENSMZEG00005024385	sbds	100	99.598	ENSPNYG00000022403	sbds	100	99.598	Pundamilia_nyererei
ENSMZEG00005024385	sbds	100	93.173	ENSPNAG00000001120	sbds	99	93.173	Pygocentrus_nattereri
ENSMZEG00005024385	sbds	100	85.542	ENSRNOG00000000888	Sbds	99	85.542	Rattus_norvegicus
ENSMZEG00005024385	sbds	100	83.936	ENSRBIG00000035557	SBDS	99	83.936	Rhinopithecus_bieti
ENSMZEG00005024385	sbds	100	83.936	ENSRROG00000040842	-	99	83.936	Rhinopithecus_roxellana
ENSMZEG00005024385	sbds	100	69.076	ENSRROG00000041986	-	99	69.076	Rhinopithecus_roxellana
ENSMZEG00005024385	sbds	96	43.496	YLR022C	-	96	43.496	Saccharomyces_cerevisiae
ENSMZEG00005024385	sbds	93	82.251	ENSSBOG00000022460	SBDS	99	82.251	Saimiri_boliviensis_boliviensis
ENSMZEG00005024385	sbds	100	73.896	ENSSHAG00000010263	SBDS	99	73.896	Sarcophilus_harrisii
ENSMZEG00005024385	sbds	100	92.771	ENSSFOG00015001108	sbds	99	92.771	Scleropages_formosus
ENSMZEG00005024385	sbds	100	95.181	ENSSMAG00000020506	sbds	100	95.181	Scophthalmus_maximus
ENSMZEG00005024385	sbds	100	96.386	ENSSDUG00000001528	sbds	100	96.386	Seriola_dumerili
ENSMZEG00005024385	sbds	100	95.984	ENSSLDG00000003659	sbds	100	95.984	Seriola_lalandi_dorsalis
ENSMZEG00005024385	sbds	61	89.542	ENSSARG00000013132	-	100	89.542	Sorex_araneus
ENSMZEG00005024385	sbds	73	90.698	ENSSARG00000001899	-	73	90.698	Sorex_araneus
ENSMZEG00005024385	sbds	100	85.141	ENSSPUG00000002699	SBDS	99	85.141	Sphenodon_punctatus
ENSMZEG00005024385	sbds	100	97.992	ENSSPAG00000016419	sbds	100	90.000	Stegastes_partitus
ENSMZEG00005024385	sbds	100	84.337	ENSSSCG00000007732	SBDS	99	84.337	Sus_scrofa
ENSMZEG00005024385	sbds	66	87.805	ENSTGUG00000003426	SBDS	99	87.805	Taeniopygia_guttata
ENSMZEG00005024385	sbds	100	96.386	ENSTRUG00000021443	sbds	100	96.386	Takifugu_rubripes
ENSMZEG00005024385	sbds	100	96.787	ENSTNIG00000019000	sbds	100	96.787	Tetraodon_nigroviridis
ENSMZEG00005024385	sbds	84	71.154	ENSTBEG00000001178	SBDS	100	71.154	Tupaia_belangeri
ENSMZEG00005024385	sbds	100	65.863	ENSTTRG00000003921	SBDS	99	65.863	Tursiops_truncatus
ENSMZEG00005024385	sbds	100	83.936	ENSUAMG00000001326	SBDS	99	83.936	Ursus_americanus
ENSMZEG00005024385	sbds	100	83.936	ENSUMAG00000015353	SBDS	99	83.936	Ursus_maritimus
ENSMZEG00005024385	sbds	100	83.936	ENSVVUG00000016478	SBDS	99	83.936	Vulpes_vulpes
ENSMZEG00005024385	sbds	100	85.944	ENSXETG00000010093	sbds	99	85.944	Xenopus_tropicalis
ENSMZEG00005024385	sbds	100	83.133	ENSXCOG00000010639	sbds	100	83.133	Xiphophorus_couchianus
ENSMZEG00005024385	sbds	100	94.378	ENSXMAG00000006065	sbds	100	94.378	Xiphophorus_maculatus