EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005024441 (Gene tree)
Gene ID: 101487140
Gene Symbol: ercc2
Alias: XPD|zgc:56365
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 12591 bases
Position: chrLG14:32622042-32634632
Accession: 101487140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005032822	ResIII	PF04851.15	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005033881	-	1998	-	ENSMZEP00005032822	665 (aa)	-	-
ENSMZET00005033879	-	7374	XM_004569620	ENSMZEP00005032820	760 (aa)	XP_004569677	UPI00032A25A2

Gene Model

Click here to download ENSMZEG00005024441's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03022	Basal transcription factors	KEGG
mze03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005024441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005024441	ercc2	99	84.789	ENSG00000104884	ERCC2	97	84.789	Homo_sapiens
ENSMZEG00005024441	ercc2	99	97.289	ENSAPOG00000000375	ercc2	100	97.289	Acanthochromis_polyacanthus
ENSMZEG00005024441	ercc2	100	98.947	ENSACIG00000008002	ercc2	98	98.947	Amphilophus_citrinellus
ENSMZEG00005024441	ercc2	100	95.502	ENSAOCG00000016153	ercc2	100	95.502	Amphiprion_ocellaris
ENSMZEG00005024441	ercc2	100	95.352	ENSAPEG00000016712	ercc2	100	95.352	Amphiprion_percula
ENSMZEG00005024441	ercc2	100	97.895	ENSATEG00000005268	ercc2	98	97.895	Anabas_testudineus
ENSMZEG00005024441	ercc2	99	84.639	ENSANAG00000022694	ERCC2	97	84.639	Aotus_nancymaae
ENSMZEG00005024441	ercc2	99	100.000	ENSACLG00000017573	ercc2	100	100.000	Astatotilapia_calliptera
ENSMZEG00005024441	ercc2	99	95.030	ENSAMXG00000009052	ercc2	99	95.030	Astyanax_mexicanus
ENSMZEG00005024441	ercc2	99	84.940	ENSCJAG00000012716	ERCC2	97	84.940	Callithrix_jacchus
ENSMZEG00005024441	ercc2	99	85.392	ENSCAFG00020011390	ERCC2	98	85.392	Canis_lupus_dingo
ENSMZEG00005024441	ercc2	99	69.347	ENSTSYG00000026723	ERCC2	98	69.347	Carlito_syrichta
ENSMZEG00005024441	ercc2	99	82.810	ENSCCAG00000019831	ERCC2	97	82.810	Cebus_capucinus
ENSMZEG00005024441	ercc2	99	84.940	ENSCANG00000040683	ERCC2	97	84.940	Colobus_angolensis_palliatus
ENSMZEG00005024441	ercc2	100	92.030	ENSCSEG00000006041	ercc2	100	92.030	Cynoglossus_semilaevis
ENSMZEG00005024441	ercc2	99	82.681	ENSEASG00005013856	ERCC2	97	82.681	Equus_asinus_asinus
ENSMZEG00005024441	ercc2	99	93.524	ENSELUG00000018055	ercc2	99	93.524	Esox_lucius
ENSMZEG00005024441	ercc2	99	85.392	ENSFCAG00000002679	ERCC2	97	85.392	Felis_catus
ENSMZEG00005024441	ercc2	100	97.744	ENSFHEG00000000072	ercc2	98	97.744	Fundulus_heteroclitus
ENSMZEG00005024441	ercc2	99	85.349	ENSGAGG00000009493	ERCC2	98	85.349	Gopherus_agassizii
ENSMZEG00005024441	ercc2	99	84.940	ENSGGOG00000015842	ERCC2	97	84.940	Gorilla_gorilla
ENSMZEG00005024441	ercc2	100	99.102	ENSHBUG00000002187	ercc2	100	99.102	Haplochromis_burtoni
ENSMZEG00005024441	ercc2	100	96.391	ENSLBEG00000010573	ercc2	90	96.391	Labrus_bergylta
ENSMZEG00005024441	ercc2	99	84.940	ENSMFAG00000037898	ERCC2	97	84.940	Macaca_fascicularis
ENSMZEG00005024441	ercc2	99	84.940	ENSMMUG00000014419	ERCC2	97	84.940	Macaca_mulatta
ENSMZEG00005024441	ercc2	99	84.940	ENSMNEG00000042641	ERCC2	97	84.940	Macaca_nemestrina
ENSMZEG00005024441	ercc2	99	84.917	ENSMLEG00000043492	ERCC2	97	84.917	Mandrillus_leucophaeus
ENSMZEG00005024441	ercc2	100	97.744	ENSMAMG00000016724	ercc2	98	97.744	Mastacembelus_armatus
ENSMZEG00005024441	ercc2	99	84.488	ENSMICG00000000635	ERCC2	97	84.488	Microcebus_murinus
ENSMZEG00005024441	ercc2	100	91.729	ENSMMOG00000005162	ercc2	98	91.729	Mola_mola
ENSMZEG00005024441	ercc2	100	96.692	ENSMALG00000005990	ercc2	98	96.692	Monopterus_albus
ENSMZEG00005024441	ercc2	99	85.693	MGP_CAROLIEiJ_G0029287	Ercc2	97	85.693	Mus_caroli
ENSMZEG00005024441	ercc2	99	85.693	ENSMUSG00000030400	Ercc2	97	85.693	Mus_musculus
ENSMZEG00005024441	ercc2	99	85.693	MGP_PahariEiJ_G0021147	Ercc2	97	85.693	Mus_pahari
ENSMZEG00005024441	ercc2	99	85.542	MGP_SPRETEiJ_G0030371	Ercc2	97	85.542	Mus_spretus
ENSMZEG00005024441	ercc2	99	84.940	ENSPPAG00000044005	ERCC2	97	84.940	Pan_paniscus
ENSMZEG00005024441	ercc2	99	80.723	ENSPPRG00000000507	ERCC2	97	80.873	Panthera_pardus
ENSMZEG00005024441	ercc2	99	84.940	ENSPTRG00000011149	ERCC2	97	84.940	Pan_troglodytes
ENSMZEG00005024441	ercc2	99	84.917	ENSPANG00000032195	ERCC2	97	84.917	Papio_anubis
ENSMZEG00005024441	ercc2	99	90.361	ENSPKIG00000006883	ercc2	96	90.361	Paramormyrops_kingsleyae
ENSMZEG00005024441	ercc2	100	95.188	ENSPMGG00000000223	ercc2	100	95.188	Periophthalmus_magnuspinnatus
ENSMZEG00005024441	ercc2	100	97.594	ENSPLAG00000002626	ercc2	98	97.594	Poecilia_latipinna
ENSMZEG00005024441	ercc2	100	97.594	ENSPMEG00000002858	ercc2	98	97.594	Poecilia_mexicana
ENSMZEG00005024441	ercc2	100	92.932	ENSPREG00000019280	ercc2	97	92.932	Poecilia_reticulata
ENSMZEG00005024441	ercc2	99	99.250	ENSPNYG00000022007	ercc2	100	99.250	Pundamilia_nyererei
ENSMZEG00005024441	ercc2	99	94.428	ENSPNAG00000010434	ercc2	99	94.428	Pygocentrus_nattereri
ENSMZEG00005024441	ercc2	99	84.940	ENSRROG00000040423	ERCC2	97	84.940	Rhinopithecus_roxellana
ENSMZEG00005024441	ercc2	99	84.789	ENSSBOG00000030257	ERCC2	98	84.789	Saimiri_boliviensis_boliviensis
ENSMZEG00005024441	ercc2	99	90.597	ENSSMAG00000019720	ercc2	100	90.597	Scophthalmus_maximus
ENSMZEG00005024441	ercc2	100	97.143	ENSSDUG00000002397	ercc2	100	97.143	Seriola_dumerili
ENSMZEG00005024441	ercc2	100	96.992	ENSSLDG00000020353	ercc2	100	96.992	Seriola_lalandi_dorsalis
ENSMZEG00005024441	ercc2	100	97.444	ENSSPAG00000002074	ercc2	98	97.444	Stegastes_partitus
ENSMZEG00005024441	ercc2	100	95.188	ENSTRUG00000007303	ercc2	98	95.188	Takifugu_rubripes
ENSMZEG00005024441	ercc2	99	85.392	ENSUAMG00000019562	ERCC2	98	85.392	Ursus_americanus
ENSMZEG00005024441	ercc2	100	92.932	ENSXMAG00000003922	ercc2	97	92.932	Xiphophorus_maculatus