EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005024627 (Gene tree)
Gene ID: 101466619
Gene Symbol: srsf7a
Alias: fb39b02|wu:fb39b02|zgc:77155
Full Name: serine and arginine rich splicing factor 7
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 9685 bases
Position: chrLG14:33840473-33850157
Accession: 101466619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005033032	RRM_1	PF00076.22	5.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005034123	-	1035	XM_004574104	ENSMZEP00005033032	254 (aa)	XP_004574161	UPI0003AF2D16

Gene Model

Click here to download ENSMZEG00005024627's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG
mze05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005024627's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005024627	srsf7a	100	97.244	ENSAPOG00000023586	srsf7a	100	97.244	Acanthochromis_polyacanthus
ENSMZEG00005024627	srsf7a	61	56.051	ENSACIG00000016419	-	56	75.294	Amphilophus_citrinellus
ENSMZEG00005024627	srsf7a	100	98.031	ENSAOCG00000012705	srsf7a	100	98.031	Amphiprion_ocellaris
ENSMZEG00005024627	srsf7a	100	98.031	ENSAPEG00000017818	srsf7a	100	98.031	Amphiprion_percula
ENSMZEG00005024627	srsf7a	100	98.425	ENSATEG00000004691	srsf7a	100	98.425	Anabas_testudineus
ENSMZEG00005024627	srsf7a	100	100.000	ENSACLG00000014716	srsf7a	100	100.000	Astatotilapia_calliptera
ENSMZEG00005024627	srsf7a	52	94.697	ENSCSEG00000006378	srsf7a	82	98.261	Cynoglossus_semilaevis
ENSMZEG00005024627	srsf7a	55	56.738	ENSCVAG00000009865	-	56	75.294	Cyprinodon_variegatus
ENSMZEG00005024627	srsf7a	79	67.822	ENSDARG00000035325	srsf7a	85	95.161	Danio_rerio
ENSMZEG00005024627	srsf7a	59	53.086	ENSEBUG00000002677	-	56	67.442	Eptatretus_burgeri
ENSMZEG00005024627	srsf7a	52	58.696	ENSELUG00000014357	SRSF3	58	70.213	Esox_lucius
ENSMZEG00005024627	srsf7a	79	57.820	ENSELUG00000018155	srsf7b	83	73.913	Esox_lucius
ENSMZEG00005024627	srsf7a	51	93.798	ENSFHEG00000007159	srsf7a	70	93.798	Fundulus_heteroclitus
ENSMZEG00005024627	srsf7a	74	86.598	ENSGMOG00000002004	srsf7a	55	92.126	Gadus_morhua
ENSMZEG00005024627	srsf7a	50	66.154	ENSGAFG00000008856	srsf7b	84	69.231	Gambusia_affinis
ENSMZEG00005024627	srsf7a	100	100.000	ENSHBUG00000001795	srsf7a	100	100.000	Haplochromis_burtoni
ENSMZEG00005024627	srsf7a	57	53.741	ENSHCOG00000017795	-	51	71.765	Hippocampus_comes
ENSMZEG00005024627	srsf7a	54	56.835	ENSJJAG00000020230	-	71	61.739	Jaculus_jaculus
ENSMZEG00005024627	srsf7a	100	96.094	ENSKMAG00000002322	srsf7a	100	96.094	Kryptolebias_marmoratus
ENSMZEG00005024627	srsf7a	100	97.638	ENSMAMG00000017197	srsf7a	100	97.638	Mastacembelus_armatus
ENSMZEG00005024627	srsf7a	56	64.138	ENSMAMG00000017138	srsf7b	50	73.043	Mastacembelus_armatus
ENSMZEG00005024627	srsf7a	67	47.647	ENSMAUG00000011430	-	54	61.446	Mesocricetus_auratus
ENSMZEG00005024627	srsf7a	95	95.868	ENSMALG00000012722	srsf7a	95	95.868	Monopterus_albus
ENSMZEG00005024627	srsf7a	61	52.564	ENSMLUG00000010671	-	52	75.294	Myotis_lucifugus
ENSMZEG00005024627	srsf7a	64	100.000	ENSNBRG00000006601	srsf7a	75	100.000	Neolamprologus_brichardi
ENSMZEG00005024627	srsf7a	52	67.153	ENSPKIG00000017425	srsf7b	65	75.652	Paramormyrops_kingsleyae
ENSMZEG00005024627	srsf7a	100	100.000	ENSPNYG00000005994	srsf7a	100	100.000	Pundamilia_nyererei
ENSMZEG00005024627	srsf7a	100	98.425	ENSSDUG00000003389	srsf7a	100	98.425	Seriola_dumerili
ENSMZEG00005024627	srsf7a	51	70.455	ENSSDUG00000021338	srsf7b	80	73.913	Seriola_dumerili
ENSMZEG00005024627	srsf7a	100	98.425	ENSSLDG00000007715	srsf7a	100	98.425	Seriola_lalandi_dorsalis
ENSMZEG00005024627	srsf7a	51	97.674	ENSSPAG00000022192	srsf7a	99	98.387	Stegastes_partitus
ENSMZEG00005024627	srsf7a	100	96.063	ENSTRUG00000010529	srsf7a	100	96.063	Takifugu_rubripes
ENSMZEG00005024627	srsf7a	59	46.000	ENSTNIG00000014643	srsf3b	52	74.118	Tetraodon_nigroviridis
ENSMZEG00005024627	srsf7a	58	52.318	ENSVVUG00000006092	-	69	63.889	Vulpes_vulpes
ENSMZEG00005024627	srsf7a	55	64.865	ENSXETG00000025300	srsf7	61	64.789	Xenopus_tropicalis