EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005024731 (Gene tree)
Gene ID
101481258
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
47266 bases
Position
chrLG10:16968570-17015835
Accession
101481258
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005033154tRNA_anti-codonPF01336.251.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005034257RPA1 (1 of many)-2012715XM_004550154ENSMZEP00005033154640 (aa)XP_004550211UPI0003296E33
Gene Model
Click here to download ENSMZEG00005024731's gene model file
Pathways
Pathway IDPathway NameSource
mze03030DNA replicationKEGG
mze03420Nucleotide excision repairKEGG
mze03430Mismatch repairKEGG
mze03440Homologous recombinationKEGG
mze03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005024731's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005024731RPA19961.732ENSAPOG00000011658rpa19962.047Acanthochromis_polyacanthus
ENSMZEG00005024731RPA19975.758ENSAPOG00000019409RPA19972.086Acanthochromis_polyacanthus
ENSMZEG00005024731RPA19759.807ENSAMEG00000007706RPA19659.807Ailuropoda_melanoleuca
ENSMZEG00005024731RPA19654.886ENSACIG00000007277rpa19954.886Amphilophus_citrinellus
ENSMZEG00005024731RPA19686.179ENSACIG00000012881RPA110086.179Amphilophus_citrinellus
ENSMZEG00005024731RPA19981.481ENSAOCG00000009003RPA19981.481Amphiprion_ocellaris
ENSMZEG00005024731RPA19962.205ENSAOCG00000023376rpa19962.205Amphiprion_ocellaris
ENSMZEG00005024731RPA19962.205ENSAPEG00000008634rpa19962.205Amphiprion_percula
ENSMZEG00005024731RPA19979.638ENSAPEG00000019132RPA19979.487Amphiprion_percula
ENSMZEG00005024731RPA19561.842ENSATEG00000022024rpa19961.842Anabas_testudineus
ENSMZEG00005024731RPA19979.268ENSATEG00000006443RPA19979.421Anabas_testudineus
ENSMZEG00005024731RPA19850.495ENSAPLG00000012442RPA110050.354Anas_platyrhynchos
ENSMZEG00005024731RPA19952.174ENSACAG00000014490RPA19952.174Anolis_carolinensis
ENSMZEG00005024731RPA19758.937ENSANAG00000023456RPA19858.937Aotus_nancymaae
ENSMZEG00005024731RPA19462.667ENSACLG00000006640rpa19962.667Astatotilapia_calliptera
ENSMZEG00005024731RPA1100100.000ENSACLG00000005223RPA1100100.000Astatotilapia_calliptera
ENSMZEG00005024731RPA19960.720ENSAMXG00000008418rpa19961.815Astyanax_mexicanus
ENSMZEG00005024731RPA19957.524ENSBTAG00000009711RPA19957.524Bos_taurus
ENSMZEG00005024731RPA19956.740ENSCJAG00000001848RPA19957.524Callithrix_jacchus
ENSMZEG00005024731RPA19957.524ENSCAFG00000019249RPA19957.837Canis_familiaris
ENSMZEG00005024731RPA19957.524ENSCAFG00020009847RPA19957.837Canis_lupus_dingo
ENSMZEG00005024731RPA19956.426ENSCHIG00000026308RPA19957.367Capra_hircus
ENSMZEG00005024731RPA19956.740ENSTSYG00000003482-9956.740Carlito_syrichta
ENSMZEG00005024731RPA19956.740ENSCPOG00000000035RPA19956.740Cavia_porcellus
ENSMZEG00005024731RPA19948.276ENSCCAG00000010981RPA19949.060Cebus_capucinus
ENSMZEG00005024731RPA19953.978ENSCLAG00000015045-9953.978Chinchilla_lanigera
ENSMZEG00005024731RPA19956.899ENSCLAG00000005185-9956.899Chinchilla_lanigera
ENSMZEG00005024731RPA19948.044ENSCSAG00000013833RPA19948.589Chlorocebus_sabaeus
ENSMZEG00005024731RPA19656.515ENSCHOG00000013540-9956.515Choloepus_hoffmanni
ENSMZEG00005024731RPA16866.514ENSCHOG00000009454-9966.514Choloepus_hoffmanni
ENSMZEG00005024731RPA19956.630ENSCPBG00000020377RPA19957.789Chrysemys_picta_bellii
ENSMZEG00005024731RPA19941.589ENSCING00000023482-9941.589Ciona_intestinalis
ENSMZEG00005024731RPA19756.844ENSCANG00000030911RPA19856.844Colobus_angolensis_palliatus
ENSMZEG00005024731RPA19958.110ENSCGRG00001008197Rpa19958.110Cricetulus_griseus_chok1gshd
ENSMZEG00005024731RPA16865.438ENSCGRG00000000582Rpa19958.712Cricetulus_griseus_crigri
ENSMZEG00005024731RPA19960.630ENSCSEG00000013066rpa19960.630Cynoglossus_semilaevis
ENSMZEG00005024731RPA19966.615ENSCSEG00000012726RPA19967.667Cynoglossus_semilaevis
ENSMZEG00005024731RPA19960.630ENSCVAG00000019431rpa19962.248Cyprinodon_variegatus
ENSMZEG00005024731RPA19673.220ENSCVAG00000013446-9673.220Cyprinodon_variegatus
ENSMZEG00005024731RPA19962.128ENSDARG00000003938rpa19962.128Danio_rerio
ENSMZEG00005024731RPA19957.413ENSDNOG00000017218RPA19857.413Dasypus_novemcinctus
ENSMZEG00005024731RPA19958.464ENSDORG00000006199Rpa19958.464Dipodomys_ordii
ENSMZEG00005024731RPA19937.285FBgn0010173RpA-709837.598Drosophila_melanogaster
ENSMZEG00005024731RPA18365.979ENSETEG00000017608RPA18265.979Echinops_telfairi
ENSMZEG00005024731RPA19464.955ENSEASG00005009372RPA19964.955Equus_asinus_asinus
ENSMZEG00005024731RPA19958.150ENSECAG00000023886RPA19958.150Equus_caballus
ENSMZEG00005024731RPA16564.833ENSEEUG00000002186-6864.833Erinaceus_europaeus
ENSMZEG00005024731RPA18374.101ENSELUG00000006136RPA19974.101Esox_lucius
ENSMZEG00005024731RPA19962.969ENSELUG00000021071rpa19962.969Esox_lucius
ENSMZEG00005024731RPA19959.404ENSFCAG00000006306RPA19959.404Felis_catus
ENSMZEG00005024731RPA110056.211ENSFALG00000006575RPA19956.211Ficedula_albicollis
ENSMZEG00005024731RPA19957.433ENSFDAG00000007720RPA19957.433Fukomys_damarensis
ENSMZEG00005024731RPA19962.362ENSFHEG00000003580rpa19962.362Fundulus_heteroclitus
ENSMZEG00005024731RPA19959.685ENSGMOG00000010382rpa19959.685Gadus_morhua
ENSMZEG00005024731RPA110055.573ENSGALG00000003072RPA19955.573Gallus_gallus
ENSMZEG00005024731RPA110075.152ENSGAFG00000020953RPA110075.152Gambusia_affinis
ENSMZEG00005024731RPA19961.575ENSGAFG00000012916rpa19961.575Gambusia_affinis
ENSMZEG00005024731RPA19959.875ENSGACG00000010856rpa19959.875Gasterosteus_aculeatus
ENSMZEG00005024731RPA19957.098ENSGAGG00000013611RPA19957.098Gopherus_agassizii
ENSMZEG00005024731RPA19956.113ENSGGOG00000014186RPA19956.113Gorilla_gorilla
ENSMZEG00005024731RPA19674.878ENSHBUG00000009348RPA19974.878Haplochromis_burtoni
ENSMZEG00005024731RPA19963.150ENSHBUG00000017773rpa19963.150Haplochromis_burtoni
ENSMZEG00005024731RPA19957.524ENSHGLG00000008846RPA19957.680Heterocephalus_glaber_female
ENSMZEG00005024731RPA19957.524ENSHGLG00100017755-9957.680Heterocephalus_glaber_male
ENSMZEG00005024731RPA19948.980ENSHGLG00100002005-9949.137Heterocephalus_glaber_male
ENSMZEG00005024731RPA19953.365ENSHGLG00100000799-9953.365Heterocephalus_glaber_male
ENSMZEG00005024731RPA19956.495ENSHCOG00000001401rpa19956.113Hippocampus_comes
ENSMZEG00005024731RPA110048.223ENSHCOG00000000351RPA19857.042Hippocampus_comes
ENSMZEG00005024731RPA19962.441ENSIPUG00000004400rpa19962.441Ictalurus_punctatus
ENSMZEG00005024731RPA19554.634ENSSTOG00000022475RPA19754.634Ictidomys_tridecemlineatus
ENSMZEG00005024731RPA19658.185ENSJJAG00000000876Rpa19858.185Jaculus_jaculus
ENSMZEG00005024731RPA19960.748ENSKMAG00000005605rpa19961.068Kryptolebias_marmoratus
ENSMZEG00005024731RPA110075.039ENSKMAG00000000234RPA110075.195Kryptolebias_marmoratus
ENSMZEG00005024731RPA19959.718ENSLBEG00000021604rpa19959.718Labrus_bergylta
ENSMZEG00005024731RPA19969.958ENSLBEG00000002281RPA19583.475Labrus_bergylta
ENSMZEG00005024731RPA17358.650ENSLACG00000007210RPA19558.650Latimeria_chalumnae
ENSMZEG00005024731RPA19960.156ENSLOCG00000006397rpa19960.156Lepisosteus_oculatus
ENSMZEG00005024731RPA19757.488ENSLAFG00000015354RPA19954.985Loxodonta_africana
ENSMZEG00005024731RPA18256.190ENSMFAG00000036138-9856.489Macaca_fascicularis
ENSMZEG00005024731RPA19952.821ENSMMUG00000002442-9952.821Macaca_mulatta
ENSMZEG00005024731RPA19757.395ENSMMUG00000011604-9857.971Macaca_mulatta
ENSMZEG00005024731RPA18960.000ENSMNEG00000029837-9960.000Macaca_nemestrina
ENSMZEG00005024731RPA19656.888ENSMNEG00000031632-9857.143Macaca_nemestrina
ENSMZEG00005024731RPA19754.254ENSMLEG00000038768-9854.254Mandrillus_leucophaeus
ENSMZEG00005024731RPA19961.260ENSMAMG00000017993rpa19961.260Mastacembelus_armatus
ENSMZEG00005024731RPA19977.232ENSMAMG00000020097RPA19977.232Mastacembelus_armatus
ENSMZEG00005024731RPA19963.150ENSMZEG00005007551rpa19963.150Maylandia_zebra
ENSMZEG00005024731RPA19955.243ENSMGAG00000005315RPA19855.243Meleagris_gallopavo
ENSMZEG00005024731RPA19657.903ENSMAUG00000010474Rpa19858.226Mesocricetus_auratus
ENSMZEG00005024731RPA19958.556ENSMICG00000012867RPA19958.713Microcebus_murinus
ENSMZEG00005024731RPA19957.571ENSMOCG00000013019Rpa19957.571Microtus_ochrogaster
ENSMZEG00005024731RPA19384.928ENSMMOG00000010868RPA19884.928Mola_mola
ENSMZEG00005024731RPA19662.075ENSMMOG00000014292rpa19962.075Mola_mola
ENSMZEG00005024731RPA19956.610ENSMODG00000010549RPA19956.610Monodelphis_domestica
ENSMZEG00005024731RPA19978.517ENSMALG00000001208RPA19978.517Monopterus_albus
ENSMZEG00005024731RPA19961.321ENSMALG00000011453rpa19961.321Monopterus_albus
ENSMZEG00005024731RPA19958.713MGP_CAROLIEiJ_G0016734Rpa19958.556Mus_caroli
ENSMZEG00005024731RPA19958.307ENSMUSG00000000751Rpa19958.307Mus_musculus
ENSMZEG00005024731RPA19958.242MGP_PahariEiJ_G0017871Rpa19958.242Mus_pahari
ENSMZEG00005024731RPA19958.150MGP_SPRETEiJ_G0017577Rpa19958.150Mus_spretus
ENSMZEG00005024731RPA19958.307ENSMPUG00000013119RPA19958.307Mustela_putorius_furo
ENSMZEG00005024731RPA19757.810ENSMLUG00000006113RPA19557.810Myotis_lucifugus
ENSMZEG00005024731RPA19757.325ENSNGAG00000004522Rpa19657.325Nannospalax_galili
ENSMZEG00005024731RPA19986.120ENSNBRG00000009672RPA19786.120Neolamprologus_brichardi
ENSMZEG00005024731RPA19561.983ENSNBRG00000020595rpa19961.983Neolamprologus_brichardi
ENSMZEG00005024731RPA19957.210ENSNLEG00000017149RPA19957.524Nomascus_leucogenys
ENSMZEG00005024731RPA19749.597ENSMEUG00000006714RPA19849.597Notamacropus_eugenii
ENSMZEG00005024731RPA19657.468ENSODEG00000009038RPA19657.468Octodon_degus
ENSMZEG00005024731RPA19962.992ENSONIG00000013135rpa19962.992Oreochromis_niloticus
ENSMZEG00005024731RPA19857.143ENSOANG00000010880RPA19957.143Ornithorhynchus_anatinus
ENSMZEG00005024731RPA19955.387ENSOCUG00000001504RPA19955.387Oryctolagus_cuniculus
ENSMZEG00005024731RPA19960.945ENSORLG00000004856rpa19960.945Oryzias_latipes
ENSMZEG00005024731RPA19974.924ENSORLG00000003368RPA19974.924Oryzias_latipes
ENSMZEG00005024731RPA19973.582ENSORLG00020015284RPA19973.582Oryzias_latipes_hni
ENSMZEG00005024731RPA19960.787ENSORLG00020008980rpa19960.787Oryzias_latipes_hni
ENSMZEG00005024731RPA16782.258ENSORLG00015005867-9982.258Oryzias_latipes_hsok
ENSMZEG00005024731RPA19960.787ENSORLG00015013982rpa19960.787Oryzias_latipes_hsok
ENSMZEG00005024731RPA19976.006ENSORLG00015020383RPA19976.006Oryzias_latipes_hsok
ENSMZEG00005024731RPA19972.126ENSOMEG00000011040RPA19874.225Oryzias_melastigma
ENSMZEG00005024731RPA19959.055ENSOMEG00000004704rpa19959.055Oryzias_melastigma
ENSMZEG00005024731RPA19956.426ENSOGAG00000005581-9956.426Otolemur_garnettii
ENSMZEG00005024731RPA17763.874ENSOGAG00000029379-9963.874Otolemur_garnettii
ENSMZEG00005024731RPA19956.426ENSOARG00000014479RPA19957.367Ovis_aries
ENSMZEG00005024731RPA19957.524ENSPPAG00000039680RPA19957.524Pan_paniscus
ENSMZEG00005024731RPA19959.346ENSPPRG00000011807RPA19959.346Panthera_pardus
ENSMZEG00005024731RPA19959.561ENSPTIG00000007898RPA19959.561Panthera_tigris_altaica
ENSMZEG00005024731RPA19957.367ENSPTRG00000008539RPA19957.367Pan_troglodytes
ENSMZEG00005024731RPA19956.808ENSPANG00000024592RPA19957.053Papio_anubis
ENSMZEG00005024731RPA19561.741ENSPKIG00000008053rpa19462.069Paramormyrops_kingsleyae
ENSMZEG00005024731RPA19756.913ENSPSIG00000015617RPA19856.913Pelodiscus_sinensis
ENSMZEG00005024731RPA19965.635ENSPMGG00000000543RPA19970.805Periophthalmus_magnuspinnatus
ENSMZEG00005024731RPA19661.175ENSPMGG00000011589rpa19860.359Periophthalmus_magnuspinnatus
ENSMZEG00005024731RPA19957.480ENSPEMG00000021061Rpa19957.480Peromyscus_maniculatus_bairdii
ENSMZEG00005024731RPA19955.919ENSPCIG00000019049RPA19956.386Phascolarctos_cinereus
ENSMZEG00005024731RPA19962.047ENSPFOG00000003987rpa19962.047Poecilia_formosa
ENSMZEG00005024731RPA19961.792ENSPLAG00000004984rpa19961.792Poecilia_latipinna
ENSMZEG00005024731RPA19575.884ENSPLAG00000008844-9775.884Poecilia_latipinna
ENSMZEG00005024731RPA19962.047ENSPMEG00000020602rpa19962.047Poecilia_mexicana
ENSMZEG00005024731RPA19575.884ENSPMEG00000003627-9775.884Poecilia_mexicana
ENSMZEG00005024731RPA110072.794ENSPREG00000010119RPA110072.794Poecilia_reticulata
ENSMZEG00005024731RPA19455.519ENSPREG00000010174rpa19655.519Poecilia_reticulata
ENSMZEG00005024731RPA19957.457ENSPCOG00000001799RPA19957.457Propithecus_coquereli
ENSMZEG00005024731RPA19957.477ENSPVAG00000002149RPA19957.477Pteropus_vampyrus
ENSMZEG00005024731RPA19963.307ENSPNYG00000016316rpa19963.307Pundamilia_nyererei
ENSMZEG00005024731RPA110099.531ENSPNYG00000024165RPA110099.531Pundamilia_nyererei
ENSMZEG00005024731RPA19954.747ENSPNAG00000008599rpa19954.193Pygocentrus_nattereri
ENSMZEG00005024731RPA19660.664ENSRNOG00000003123Rpa19958.464Rattus_norvegicus
ENSMZEG00005024731RPA19956.698ENSRBIG00000036587RPA19956.698Rhinopithecus_bieti
ENSMZEG00005024731RPA19953.271ENSRROG00000043278RPA19953.271Rhinopithecus_roxellana
ENSMZEG00005024731RPA16836.913YAR007CRFA17136.913Saccharomyces_cerevisiae
ENSMZEG00005024731RPA19158.362ENSSBOG00000030233RPA19759.215Saimiri_boliviensis_boliviensis
ENSMZEG00005024731RPA19758.132ENSSHAG00000007969RPA19658.360Sarcophilus_harrisii
ENSMZEG00005024731RPA19963.594ENSSFOG00015005362rpa19263.594Scleropages_formosus
ENSMZEG00005024731RPA19976.586ENSSMAG00000019746RPA19976.586Scophthalmus_maximus
ENSMZEG00005024731RPA19978.940ENSSDUG00000016358RPA19979.087Seriola_dumerili
ENSMZEG00005024731RPA19962.362ENSSDUG00000011949rpa19962.362Seriola_dumerili
ENSMZEG00005024731RPA19961.890ENSSLDG00000011806rpa19961.890Seriola_lalandi_dorsalis
ENSMZEG00005024731RPA19977.924ENSSLDG00000020784RPA19977.924Seriola_lalandi_dorsalis
ENSMZEG00005024731RPA19747.826ENSSARG00000007506RPA19847.826Sorex_araneus
ENSMZEG00005024731RPA19755.556ENSSPUG00000007223RPA19855.556Sphenodon_punctatus
ENSMZEG00005024731RPA19875.835ENSSPAG00000011165RPA19875.676Stegastes_partitus
ENSMZEG00005024731RPA19961.890ENSSPAG00000009903rpa19961.890Stegastes_partitus
ENSMZEG00005024731RPA19758.199ENSSSCG00000017822RPA19858.454Sus_scrofa
ENSMZEG00005024731RPA110055.607ENSTGUG00000005775RPA19955.607Taeniopygia_guttata
ENSMZEG00005024731RPA19961.417ENSTRUG00000003616rpa19961.417Takifugu_rubripes
ENSMZEG00005024731RPA19966.436ENSTRUG00000000405RPA19967.041Takifugu_rubripes
ENSMZEG00005024731RPA19962.264ENSTNIG00000016199rpa19962.264Tetraodon_nigroviridis
ENSMZEG00005024731RPA17365.525ENSTBEG00000002709RPA17965.525Tupaia_belangeri
ENSMZEG00005024731RPA19955.486ENSTTRG00000001169RPA19956.426Tursiops_truncatus
ENSMZEG00005024731RPA18775.000ENSUAMG00000015676RPA19575.000Ursus_americanus
ENSMZEG00005024731RPA19957.994ENSUMAG00000009328RPA19958.621Ursus_maritimus
ENSMZEG00005024731RPA19955.836ENSVPAG00000009443RPA19955.836Vicugna_pacos
ENSMZEG00005024731RPA19956.897ENSVVUG00000021715RPA19957.210Vulpes_vulpes
ENSMZEG00005024731RPA19957.788ENSXETG00000013538rpa19958.658Xenopus_tropicalis
ENSMZEG00005024731RPA19361.204ENSXCOG00000010068rpa19461.724Xiphophorus_couchianus
ENSMZEG00005024731RPA19671.895ENSXCOG00000009899-10071.895Xiphophorus_couchianus
ENSMZEG00005024731RPA19961.417ENSXMAG00000004102rpa19961.913Xiphophorus_maculatus
ENSMZEG00005024731RPA110069.787ENSXMAG00000010333RPA110069.787Xiphophorus_maculatus

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