EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005025448 (Gene tree)
Gene ID: 101473147
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 17919 bases
Position: chrLG11:5453702-5471620
Accession: 101473147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034040	POP1	PF06978.11	2.4e-36	1	2
ENSMZEP00005034040	POP1	PF06978.11	2.4e-36	2	2
ENSMZEP00005034040	POPLD	PF08170.12	6.7e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005035238	-	7983	XM_014411611	ENSMZEP00005034040	982 (aa)	XP_014267097	UPI000D31A122

Gene Model

Click here to download ENSMZEG00005025448's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG
mze03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005025448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005025448	pop1	100	47.970	ENSG00000104356	POP1	100	48.023	Homo_sapiens
ENSMZEG00005025448	pop1	100	81.067	ENSAPOG00000008198	pop1	100	81.067	Acanthochromis_polyacanthus
ENSMZEG00005025448	pop1	100	47.714	ENSAMEG00000000556	POP1	100	47.714	Ailuropoda_melanoleuca
ENSMZEG00005025448	pop1	100	83.198	ENSACIG00000004169	POP1	100	82.020	Amphilophus_citrinellus
ENSMZEG00005025448	pop1	100	80.645	ENSAOCG00000010991	pop1	100	80.746	Amphiprion_ocellaris
ENSMZEG00005025448	pop1	100	72.709	ENSAPEG00000007607	pop1	100	71.940	Amphiprion_percula
ENSMZEG00005025448	pop1	100	75.498	ENSATEG00000024814	POP1	100	75.824	Anabas_testudineus
ENSMZEG00005025448	pop1	93	49.221	ENSAPLG00000014418	POP1	99	49.325	Anas_platyrhynchos
ENSMZEG00005025448	pop1	100	45.760	ENSACAG00000016083	POP1	100	45.480	Anolis_carolinensis
ENSMZEG00005025448	pop1	87	56.034	ENSANAG00000026360	POP1	99	55.357	Aotus_nancymaae
ENSMZEG00005025448	pop1	100	99.593	ENSACLG00000010951	pop1	100	99.593	Astatotilapia_calliptera
ENSMZEG00005025448	pop1	100	57.833	ENSAMXG00000014483	POP1	100	57.859	Astyanax_mexicanus
ENSMZEG00005025448	pop1	100	48.436	ENSBTAG00000012596	POP1	100	48.387	Bos_taurus
ENSMZEG00005025448	pop1	75	31.496	WBGene00015486	C05D11.9	89	34.434	Caenorhabditis_elegans
ENSMZEG00005025448	pop1	100	47.233	ENSCJAG00000015567	POP1	100	47.619	Callithrix_jacchus
ENSMZEG00005025448	pop1	100	48.141	ENSCAFG00000000469	POP1	100	48.141	Canis_familiaris
ENSMZEG00005025448	pop1	100	47.042	ENSCAFG00020026765	POP1	100	47.042	Canis_lupus_dingo
ENSMZEG00005025448	pop1	100	46.964	ENSCHIG00000017066	POP1	100	47.448	Capra_hircus
ENSMZEG00005025448	pop1	100	47.597	ENSTSYG00000003097	POP1	100	47.781	Carlito_syrichta
ENSMZEG00005025448	pop1	100	46.704	ENSCAPG00000007251	POP1	100	46.604	Cavia_aperea
ENSMZEG00005025448	pop1	100	48.159	ENSCPOG00000002901	POP1	100	48.061	Cavia_porcellus
ENSMZEG00005025448	pop1	100	47.238	ENSCCAG00000018939	POP1	100	47.323	Cebus_capucinus
ENSMZEG00005025448	pop1	100	47.125	ENSCATG00000040916	POP1	100	47.086	Cercocebus_atys
ENSMZEG00005025448	pop1	100	48.612	ENSCLAG00000007208	POP1	97	48.574	Chinchilla_lanigera
ENSMZEG00005025448	pop1	91	49.526	ENSCSAG00000012340	POP1	98	49.308	Chlorocebus_sabaeus
ENSMZEG00005025448	pop1	95	46.856	ENSCHOG00000011432	POP1	98	46.856	Choloepus_hoffmanni
ENSMZEG00005025448	pop1	100	49.569	ENSCPBG00000006373	POP1	100	50.144	Chrysemys_picta_bellii
ENSMZEG00005025448	pop1	82	36.437	ENSCING00000008323	-	89	36.032	Ciona_intestinalis
ENSMZEG00005025448	pop1	100	47.403	ENSCANG00000001647	POP1	100	47.458	Colobus_angolensis_palliatus
ENSMZEG00005025448	pop1	100	47.847	ENSCGRG00001017308	Pop1	100	47.751	Cricetulus_griseus_chok1gshd
ENSMZEG00005025448	pop1	100	44.596	ENSCGRG00000010824	Pop1	100	44.704	Cricetulus_griseus_crigri
ENSMZEG00005025448	pop1	100	70.968	ENSCSEG00000008737	POP1	100	70.968	Cynoglossus_semilaevis
ENSMZEG00005025448	pop1	100	72.239	ENSCVAG00000022248	pop1	100	72.239	Cyprinodon_variegatus
ENSMZEG00005025448	pop1	53	54.932	ENSDARG00000102087	pop1	98	53.965	Danio_rerio
ENSMZEG00005025448	pop1	100	45.328	ENSDNOG00000019974	POP1	100	45.185	Dasypus_novemcinctus
ENSMZEG00005025448	pop1	100	42.330	ENSDORG00000015384	Pop1	100	42.966	Dipodomys_ordii
ENSMZEG00005025448	pop1	88	48.007	ENSETEG00000007839	POP1	88	48.007	Echinops_telfairi
ENSMZEG00005025448	pop1	100	47.905	ENSEASG00005003189	POP1	98	47.714	Equus_asinus_asinus
ENSMZEG00005025448	pop1	100	47.408	ENSECAG00000024236	POP1	100	47.958	Equus_caballus
ENSMZEG00005025448	pop1	51	75.325	ENSEEUG00000003050	-	53	80.303	Erinaceus_europaeus
ENSMZEG00005025448	pop1	100	63.216	ENSELUG00000003526	pop1	100	63.518	Esox_lucius
ENSMZEG00005025448	pop1	100	47.569	ENSFCAG00000002168	POP1	100	47.424	Felis_catus
ENSMZEG00005025448	pop1	100	47.587	ENSFALG00000005711	POP1	100	48.456	Ficedula_albicollis
ENSMZEG00005025448	pop1	100	46.045	ENSFDAG00000017068	POP1	100	46.869	Fukomys_damarensis
ENSMZEG00005025448	pop1	100	72.105	ENSFHEG00000019518	pop1	100	72.105	Fundulus_heteroclitus
ENSMZEG00005025448	pop1	100	62.475	ENSGMOG00000000659	POP1	100	61.771	Gadus_morhua
ENSMZEG00005025448	pop1	100	71.169	ENSGAFG00000019770	POP1	100	70.766	Gambusia_affinis
ENSMZEG00005025448	pop1	100	67.782	ENSGACG00000003499	pop1	100	67.782	Gasterosteus_aculeatus
ENSMZEG00005025448	pop1	100	49.188	ENSGAGG00000011737	POP1	98	49.615	Gopherus_agassizii
ENSMZEG00005025448	pop1	100	48.064	ENSGGOG00000003176	POP1	100	48.023	Gorilla_gorilla
ENSMZEG00005025448	pop1	100	99.287	ENSHBUG00000021583	pop1	100	99.287	Haplochromis_burtoni
ENSMZEG00005025448	pop1	100	48.057	ENSHGLG00000006029	POP1	100	48.201	Heterocephalus_glaber_female
ENSMZEG00005025448	pop1	100	48.057	ENSHGLG00100016879	POP1	100	48.201	Heterocephalus_glaber_male
ENSMZEG00005025448	pop1	100	64.538	ENSHCOG00000013888	pop1	95	67.249	Hippocampus_comes
ENSMZEG00005025448	pop1	99	55.891	ENSIPUG00000018336	pop1	100	55.642	Ictalurus_punctatus
ENSMZEG00005025448	pop1	100	47.230	ENSSTOG00000011455	POP1	97	47.180	Ictidomys_tridecemlineatus
ENSMZEG00005025448	pop1	100	47.358	ENSJJAG00000013325	Pop1	100	47.456	Jaculus_jaculus
ENSMZEG00005025448	pop1	100	74.440	ENSKMAG00000001346	POP1	100	74.440	Kryptolebias_marmoratus
ENSMZEG00005025448	pop1	100	66.093	ENSLBEG00000024457	POP1	100	65.789	Labrus_bergylta
ENSMZEG00005025448	pop1	92	51.685	ENSLACG00000012498	POP1	98	51.890	Latimeria_chalumnae
ENSMZEG00005025448	pop1	100	54.854	ENSLOCG00000009817	POP1	100	55.179	Lepisosteus_oculatus
ENSMZEG00005025448	pop1	100	48.381	ENSLAFG00000010770	POP1	100	48.571	Loxodonta_africana
ENSMZEG00005025448	pop1	100	47.314	ENSMFAG00000000347	POP1	100	47.368	Macaca_fascicularis
ENSMZEG00005025448	pop1	100	47.458	ENSMNEG00000036870	POP1	100	47.512	Macaca_nemestrina
ENSMZEG00005025448	pop1	100	47.408	ENSMLEG00000034986	POP1	100	47.462	Mandrillus_leucophaeus
ENSMZEG00005025448	pop1	100	76.205	ENSMAMG00000004040	pop1	100	75.602	Mastacembelus_armatus
ENSMZEG00005025448	pop1	100	46.987	ENSMGAG00000012167	POP1	100	47.026	Meleagris_gallopavo
ENSMZEG00005025448	pop1	100	47.560	ENSMAUG00000017537	Pop1	100	47.464	Mesocricetus_auratus
ENSMZEG00005025448	pop1	100	47.209	ENSMICG00000004361	POP1	100	47.493	Microcebus_murinus
ENSMZEG00005025448	pop1	100	47.233	ENSMOCG00000006356	Pop1	100	47.137	Microtus_ochrogaster
ENSMZEG00005025448	pop1	100	65.962	ENSMMOG00000018242	pop1	100	65.962	Mola_mola
ENSMZEG00005025448	pop1	100	45.943	ENSMODG00000006561	POP1	100	46.415	Monodelphis_domestica
ENSMZEG00005025448	pop1	100	75.607	ENSMALG00000012621	POP1	100	75.607	Monopterus_albus
ENSMZEG00005025448	pop1	100	46.540	MGP_CAROLIEiJ_G0019726	Pop1	100	46.730	Mus_caroli
ENSMZEG00005025448	pop1	100	47.104	ENSMUSG00000022325	Pop1	100	47.293	Mus_musculus
ENSMZEG00005025448	pop1	100	46.768	MGP_PahariEiJ_G0019735	Pop1	100	46.768	Mus_pahari
ENSMZEG00005025448	pop1	100	47.293	MGP_SPRETEiJ_G0020622	Pop1	100	47.578	Mus_spretus
ENSMZEG00005025448	pop1	100	48.000	ENSMPUG00000015250	POP1	100	48.000	Mustela_putorius_furo
ENSMZEG00005025448	pop1	100	45.897	ENSMLUG00000010204	POP1	100	45.897	Myotis_lucifugus
ENSMZEG00005025448	pop1	100	47.682	ENSNGAG00000001582	Pop1	100	47.867	Nannospalax_galili
ENSMZEG00005025448	pop1	100	86.992	ENSNBRG00000002356	pop1	100	86.992	Neolamprologus_brichardi
ENSMZEG00005025448	pop1	100	48.068	ENSNLEG00000002541	POP1	100	48.120	Nomascus_leucogenys
ENSMZEG00005025448	pop1	86	56.484	ENSMEUG00000003118	POP1	83	56.484	Notamacropus_eugenii
ENSMZEG00005025448	pop1	100	47.989	ENSOPRG00000007667	POP1	100	47.989	Ochotona_princeps
ENSMZEG00005025448	pop1	100	48.295	ENSODEG00000003984	POP1	100	48.253	Octodon_degus
ENSMZEG00005025448	pop1	100	97.047	ENSONIG00000016445	pop1	100	97.047	Oreochromis_niloticus
ENSMZEG00005025448	pop1	60	47.809	ENSOANG00000001278	-	94	47.705	Ornithorhynchus_anatinus
ENSMZEG00005025448	pop1	100	47.070	ENSOCUG00000017400	POP1	100	47.170	Oryctolagus_cuniculus
ENSMZEG00005025448	pop1	100	71.284	ENSORLG00000002839	pop1	100	71.284	Oryzias_latipes
ENSMZEG00005025448	pop1	91	68.398	ENSORLG00020022450	POP1	95	68.381	Oryzias_latipes_hni
ENSMZEG00005025448	pop1	100	71.660	ENSORLG00015012746	POP1	100	71.660	Oryzias_latipes_hsok
ENSMZEG00005025448	pop1	100	70.314	ENSOMEG00000006915	pop1	99	70.314	Oryzias_melastigma
ENSMZEG00005025448	pop1	100	47.136	ENSOGAG00000001466	POP1	100	47.493	Otolemur_garnettii
ENSMZEG00005025448	pop1	100	47.970	ENSPPAG00000018410	POP1	100	48.023	Pan_paniscus
ENSMZEG00005025448	pop1	100	47.114	ENSPPRG00000005002	POP1	100	47.064	Panthera_pardus
ENSMZEG00005025448	pop1	100	47.438	ENSPTIG00000016527	POP1	100	47.438	Panthera_tigris_altaica
ENSMZEG00005025448	pop1	100	48.064	ENSPTRG00000020458	POP1	100	48.162	Pan_troglodytes
ENSMZEG00005025448	pop1	100	47.502	ENSPANG00000009704	POP1	100	47.556	Papio_anubis
ENSMZEG00005025448	pop1	100	57.947	ENSPKIG00000016325	POP1	100	58.424	Paramormyrops_kingsleyae
ENSMZEG00005025448	pop1	100	48.322	ENSPSIG00000012343	POP1	100	48.757	Pelodiscus_sinensis
ENSMZEG00005025448	pop1	100	59.808	ENSPMGG00000022253	POP1	93	64.153	Periophthalmus_magnuspinnatus
ENSMZEG00005025448	pop1	99	46.617	ENSPEMG00000023633	Pop1	100	46.241	Peromyscus_maniculatus_bairdii
ENSMZEG00005025448	pop1	91	42.947	ENSPMAG00000003209	POP1	99	42.827	Petromyzon_marinus
ENSMZEG00005025448	pop1	100	45.979	ENSPCIG00000012216	POP1	100	45.763	Phascolarctos_cinereus
ENSMZEG00005025448	pop1	100	70.896	ENSPFOG00000012490	POP1	100	70.493	Poecilia_formosa
ENSMZEG00005025448	pop1	100	70.695	ENSPLAG00000004646	POP1	100	70.191	Poecilia_latipinna
ENSMZEG00005025448	pop1	100	71.212	ENSPMEG00000019592	POP1	100	70.808	Poecilia_mexicana
ENSMZEG00005025448	pop1	100	70.553	ENSPREG00000020951	POP1	100	70.382	Poecilia_reticulata
ENSMZEG00005025448	pop1	100	47.736	ENSPPYG00000018777	POP1	100	47.601	Pongo_abelii
ENSMZEG00005025448	pop1	100	45.024	ENSPCAG00000016662	POP1	100	44.929	Procavia_capensis
ENSMZEG00005025448	pop1	100	47.398	ENSPCOG00000019420	POP1	100	47.682	Propithecus_coquereli
ENSMZEG00005025448	pop1	100	46.952	ENSPVAG00000014468	POP1	100	47.148	Pteropus_vampyrus
ENSMZEG00005025448	pop1	100	90.020	ENSPNYG00000004476	pop1	100	90.020	Pundamilia_nyererei
ENSMZEG00005025448	pop1	100	55.415	ENSPNAG00000000265	pop1	100	55.350	Pygocentrus_nattereri
ENSMZEG00005025448	pop1	100	46.520	ENSRNOG00000005243	Pop1	100	46.616	Rattus_norvegicus
ENSMZEG00005025448	pop1	100	47.408	ENSRBIG00000007996	POP1	100	47.507	Rhinopithecus_bieti
ENSMZEG00005025448	pop1	100	47.408	ENSRROG00000012334	POP1	100	47.507	Rhinopithecus_roxellana
ENSMZEG00005025448	pop1	99	47.048	ENSSBOG00000020830	POP1	100	47.188	Saimiri_boliviensis_boliviensis
ENSMZEG00005025448	pop1	100	46.422	ENSSHAG00000000296	POP1	100	46.422	Sarcophilus_harrisii
ENSMZEG00005025448	pop1	100	59.660	ENSSFOG00015007429	pop1	99	59.495	Scleropages_formosus
ENSMZEG00005025448	pop1	100	71.907	ENSSMAG00000010467	POP1	100	71.602	Scophthalmus_maximus
ENSMZEG00005025448	pop1	100	78.370	ENSSDUG00000007817	POP1	100	79.053	Seriola_dumerili
ENSMZEG00005025448	pop1	100	78.931	ENSSLDG00000012565	POP1	100	79.658	Seriola_lalandi_dorsalis
ENSMZEG00005025448	pop1	100	45.576	ENSSPUG00000003550	-	100	45.671	Sphenodon_punctatus
ENSMZEG00005025448	pop1	100	74.129	ENSSPAG00000014955	pop1	100	74.129	Stegastes_partitus
ENSMZEG00005025448	pop1	100	47.872	ENSSSCG00000006078	POP1	100	47.872	Sus_scrofa
ENSMZEG00005025448	pop1	93	44.849	ENSTGUG00000012011	-	100	45.104	Taeniopygia_guttata
ENSMZEG00005025448	pop1	100	65.863	ENSTRUG00000010856	pop1	100	65.771	Takifugu_rubripes
ENSMZEG00005025448	pop1	95	68.834	ENSTNIG00000013297	pop1	100	68.834	Tetraodon_nigroviridis
ENSMZEG00005025448	pop1	95	46.552	ENSTBEG00000014214	POP1	98	46.552	Tupaia_belangeri
ENSMZEG00005025448	pop1	100	46.819	ENSTTRG00000016071	POP1	100	47.009	Tursiops_truncatus
ENSMZEG00005025448	pop1	99	47.703	ENSUAMG00000017309	POP1	100	47.605	Ursus_americanus
ENSMZEG00005025448	pop1	100	46.837	ENSUMAG00000016952	POP1	100	51.866	Ursus_maritimus
ENSMZEG00005025448	pop1	86	52.650	ENSVPAG00000008278	POP1	82	53.025	Vicugna_pacos
ENSMZEG00005025448	pop1	100	46.851	ENSVVUG00000010994	POP1	100	46.851	Vulpes_vulpes
ENSMZEG00005025448	pop1	100	62.069	ENSXCOG00000017043	POP1	100	60.947	Xiphophorus_couchianus
ENSMZEG00005025448	pop1	100	70.393	ENSXMAG00000002472	POP1	100	70.091	Xiphophorus_maculatus