EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005025568 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 2947 bases
Position: chrAGTA05000634.1:58544-61490
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034207	zf-C2H2	PF00096.26	1.5e-26	1	5
ENSMZEP00005034207	zf-C2H2	PF00096.26	1.5e-26	2	5
ENSMZEP00005034207	zf-C2H2	PF00096.26	1.5e-26	3	5
ENSMZEP00005034207	zf-C2H2	PF00096.26	1.5e-26	4	5
ENSMZEP00005034207	zf-C2H2	PF00096.26	1.5e-26	5	5
ENSMZEP00005034207	zf-met	PF12874.7	1.4e-09	1	2
ENSMZEP00005034207	zf-met	PF12874.7	1.4e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005035408	-	885	-	ENSMZEP00005034207	294 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005025568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005025568's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005025568	-	80	62.069	ENSACIG00000008886	znf1164	91	62.069	Amphilophus_citrinellus
ENSMZEG00005025568	-	80	39.175	ENSACIG00000007882	-	72	39.175	Amphilophus_citrinellus
ENSMZEG00005025568	-	79	40.252	ENSACIG00000000360	si:ch211-241b2.1	90	40.252	Amphilophus_citrinellus
ENSMZEG00005025568	-	79	35.811	ENSATEG00000008683	si:ch211-241b2.1	69	35.811	Anabas_testudineus
ENSMZEG00005025568	-	82	69.492	ENSACLG00000000521	-	97	69.492	Astatotilapia_calliptera
ENSMZEG00005025568	-	79	38.235	ENSACLG00000024670	-	75	36.735	Astatotilapia_calliptera
ENSMZEG00005025568	-	84	75.697	ENSACLG00000017449	-	62	75.697	Astatotilapia_calliptera
ENSMZEG00005025568	-	80	40.223	ENSAMXG00000043291	-	64	42.791	Astyanax_mexicanus
ENSMZEG00005025568	-	81	43.750	ENSAMXG00000041650	-	85	43.750	Astyanax_mexicanus
ENSMZEG00005025568	-	79	39.823	ENSAMXG00000029660	-	52	39.823	Astyanax_mexicanus
ENSMZEG00005025568	-	78	35.000	ENSCSEG00000015585	-	75	35.000	Cynoglossus_semilaevis
ENSMZEG00005025568	-	81	41.410	ENSDARG00000099890	CU207221.2	95	41.410	Danio_rerio
ENSMZEG00005025568	-	79	42.241	ENSDARG00000100361	znf1174	72	42.241	Danio_rerio
ENSMZEG00005025568	-	79	41.262	ENSDARG00000099618	si:dkey-1b17.6	92	41.262	Danio_rerio
ENSMZEG00005025568	-	79	40.351	ENSDARG00000101694	znf1184	82	40.777	Danio_rerio
ENSMZEG00005025568	-	80	42.177	ENSDARG00000102401	znf1001	93	42.177	Danio_rerio
ENSMZEG00005025568	-	80	41.216	ENSDARG00000111614	znf1183	82	41.216	Danio_rerio
ENSMZEG00005025568	-	79	42.282	ENSDARG00000100803	zgc:173517	90	42.282	Danio_rerio
ENSMZEG00005025568	-	80	41.350	ENSDARG00000097521	si:dkey-111k8.5	87	41.350	Danio_rerio
ENSMZEG00005025568	-	79	43.333	ENSDARG00000109703	FO834825.1	80	43.333	Danio_rerio
ENSMZEG00005025568	-	82	42.188	ENSDARG00000100882	znf1154	76	42.254	Danio_rerio
ENSMZEG00005025568	-	79	37.652	ENSDARG00000104904	si:ch73-221f6.1	61	37.652	Danio_rerio
ENSMZEG00005025568	-	79	40.435	ENSDARG00000099731	CABZ01066719.1	92	40.678	Danio_rerio
ENSMZEG00005025568	-	79	38.922	ENSDARG00000102678	znf1181	74	41.096	Danio_rerio
ENSMZEG00005025568	-	79	43.689	ENSDARG00000088507	znf982	84	43.689	Danio_rerio
ENSMZEG00005025568	-	79	42.953	ENSDARG00000098248	CABZ01081730.1	94	42.953	Danio_rerio
ENSMZEG00005025568	-	79	44.118	ENSDARG00000053165	zgc:113377	80	41.767	Danio_rerio
ENSMZEG00005025568	-	80	40.851	ENSDARG00000099172	BX000701.1	92	40.851	Danio_rerio
ENSMZEG00005025568	-	79	41.379	ENSDARG00000113011	zgc:113102	96	40.404	Danio_rerio
ENSMZEG00005025568	-	79	40.136	ENSDARG00000103530	zgc:113102	94	40.449	Danio_rerio
ENSMZEG00005025568	-	80	38.153	ENSDARG00000105074	BX000701.2	95	38.889	Danio_rerio
ENSMZEG00005025568	-	79	43.290	ENSDARG00000092605	znf1003	73	43.290	Danio_rerio
ENSMZEG00005025568	-	79	41.304	ENSDARG00000104065	znf1154	87	41.304	Danio_rerio
ENSMZEG00005025568	-	81	41.748	ENSDARG00000111899	zgc:171435	77	41.748	Danio_rerio
ENSMZEG00005025568	-	78	42.174	ENSDARG00000078814	si:dkey-34m19.3	76	42.174	Danio_rerio
ENSMZEG00005025568	-	80	43.689	ENSDARG00000101044	si:ch73-138e16.6	87	43.689	Danio_rerio
ENSMZEG00005025568	-	80	39.442	ENSDARG00000094736	znf1157	85	39.442	Danio_rerio
ENSMZEG00005025568	-	79	41.892	ENSDARG00000103777	znf1001	99	40.976	Danio_rerio
ENSMZEG00005025568	-	79	40.976	ENSDARG00000106565	CABZ01066720.1	86	40.976	Danio_rerio
ENSMZEG00005025568	-	80	39.645	ENSDARG00000105056	znf45l	89	42.489	Danio_rerio
ENSMZEG00005025568	-	79	43.784	ENSDARG00000115326	znf1002	69	43.784	Danio_rerio
ENSMZEG00005025568	-	80	42.177	ENSDARG00000115857	znf1001	93	42.177	Danio_rerio
ENSMZEG00005025568	-	79	40.000	FBgn0037877	CG6689	50	40.000	Drosophila_melanogaster
ENSMZEG00005025568	-	81	38.034	ENSEBUG00000015073	-	74	38.889	Eptatretus_burgeri
ENSMZEG00005025568	-	82	40.000	ENSFHEG00000018209	-	67	40.000	Fundulus_heteroclitus
ENSMZEG00005025568	-	81	37.572	ENSFHEG00000013152	-	63	37.572	Fundulus_heteroclitus
ENSMZEG00005025568	-	78	38.767	ENSFHEG00000018009	-	51	39.474	Fundulus_heteroclitus
ENSMZEG00005025568	-	80	39.130	ENSHBUG00000018916	-	61	38.767	Haplochromis_burtoni
ENSMZEG00005025568	-	80	37.037	ENSHBUG00000009953	-	60	37.037	Haplochromis_burtoni
ENSMZEG00005025568	-	83	36.232	ENSKMAG00000009563	-	72	41.026	Kryptolebias_marmoratus
ENSMZEG00005025568	-	78	32.877	ENSLBEG00000022939	-	50	31.507	Labrus_bergylta
ENSMZEG00005025568	-	84	39.423	ENSMZEG00005021426	-	80	39.423	Maylandia_zebra
ENSMZEG00005025568	-	80	39.207	ENSMZEG00005007426	-	64	39.207	Maylandia_zebra
ENSMZEG00005025568	-	79	52.727	ENSMZEG00005005162	-	82	52.727	Maylandia_zebra
ENSMZEG00005025568	-	80	37.647	ENSMZEG00005027793	-	74	38.647	Maylandia_zebra
ENSMZEG00005025568	-	80	42.775	ENSMZEG00005027943	-	95	43.396	Maylandia_zebra
ENSMZEG00005025568	-	81	78.652	ENSMZEG00005022161	-	90	78.652	Maylandia_zebra
ENSMZEG00005025568	-	79	39.810	ENSMZEG00005025729	-	89	39.810	Maylandia_zebra
ENSMZEG00005025568	-	80	37.640	ENSMZEG00005026470	-	54	37.640	Maylandia_zebra
ENSMZEG00005025568	-	81	34.500	ENSMALG00000008638	-	57	34.500	Monopterus_albus
ENSMZEG00005025568	-	81	38.854	ENSMALG00000018074	-	58	38.854	Monopterus_albus
ENSMZEG00005025568	-	79	38.153	ENSNBRG00000000577	-	74	38.153	Neolamprologus_brichardi
ENSMZEG00005025568	-	79	58.602	ENSONIG00000006585	-	99	58.602	Oreochromis_niloticus
ENSMZEG00005025568	-	80	68.493	ENSONIG00000013908	-	100	68.493	Oreochromis_niloticus
ENSMZEG00005025568	-	80	67.327	ENSONIG00000003363	-	100	67.327	Oreochromis_niloticus
ENSMZEG00005025568	-	79	34.483	ENSPMGG00000001558	znf1174	54	34.483	Periophthalmus_magnuspinnatus
ENSMZEG00005025568	-	79	35.874	ENSPFOG00000011766	-	99	35.874	Poecilia_formosa
ENSMZEG00005025568	-	79	38.793	ENSPFOG00000001144	-	100	38.793	Poecilia_formosa
ENSMZEG00005025568	-	81	39.597	ENSPLAG00000016561	zgc:113348	99	35.326	Poecilia_latipinna
ENSMZEG00005025568	-	81	39.394	ENSPMEG00000007573	zgc:113343	61	39.394	Poecilia_mexicana
ENSMZEG00005025568	-	81	38.528	ENSPREG00000001514	zgc:113343	61	38.528	Poecilia_reticulata
ENSMZEG00005025568	-	84	35.088	ENSPREG00000014105	-	89	35.714	Poecilia_reticulata
ENSMZEG00005025568	-	79	37.427	ENSPREG00000005538	-	78	37.427	Poecilia_reticulata
ENSMZEG00005025568	-	80	79.574	ENSPNYG00000024183	zgc:173577	99	79.574	Pundamilia_nyererei
ENSMZEG00005025568	-	79	37.572	ENSSPAG00000013109	si:ch211-241b2.1	69	37.572	Stegastes_partitus
ENSMZEG00005025568	-	79	33.708	ENSSPAG00000009426	-	73	33.708	Stegastes_partitus
ENSMZEG00005025568	-	80	37.725	ENSSPAG00000006539	-	96	37.725	Stegastes_partitus
ENSMZEG00005025568	-	79	36.170	ENSTNIG00000000277	-	93	36.170	Tetraodon_nigroviridis
ENSMZEG00005025568	-	81	38.528	ENSXCOG00000017871	zgc:113343	65	38.528	Xiphophorus_couchianus
ENSMZEG00005025568	-	81	38.528	ENSXMAG00000019923	zgc:113343	63	38.528	Xiphophorus_maculatus