EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005025729 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 863 bases
Position: chrAGTA05000671.1:37395-38257
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034437	zf-C2H2	PF00096.26	2.8e-37	1	6
ENSMZEP00005034437	zf-C2H2	PF00096.26	2.8e-37	2	6
ENSMZEP00005034437	zf-C2H2	PF00096.26	2.8e-37	3	6
ENSMZEP00005034437	zf-C2H2	PF00096.26	2.8e-37	4	6
ENSMZEP00005034437	zf-C2H2	PF00096.26	2.8e-37	5	6
ENSMZEP00005034437	zf-C2H2	PF00096.26	2.8e-37	6	6
ENSMZEP00005034437	zf-met	PF12874.7	5.6e-08	1	2
ENSMZEP00005034437	zf-met	PF12874.7	5.6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005035648	-	774	-	ENSMZEP00005034437	257 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005025729's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005025729's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005025729	-	95	48.980	ENSACIG00000000360	si:ch211-241b2.1	95	49.550	Amphilophus_citrinellus
ENSMZEG00005025729	-	86	43.333	ENSACIG00000008886	znf1164	80	43.333	Amphilophus_citrinellus
ENSMZEG00005025729	-	96	44.385	ENSACIG00000007882	-	84	44.385	Amphilophus_citrinellus
ENSMZEG00005025729	-	95	43.779	ENSATEG00000008683	si:ch211-241b2.1	88	43.779	Anabas_testudineus
ENSMZEG00005025729	-	91	47.458	ENSATEG00000008667	-	81	47.458	Anabas_testudineus
ENSMZEG00005025729	-	87	41.279	ENSACLG00000000521	-	97	41.279	Astatotilapia_calliptera
ENSMZEG00005025729	-	87	40.698	ENSACLG00000017449	-	57	40.698	Astatotilapia_calliptera
ENSMZEG00005025729	-	94	52.874	ENSACLG00000024670	-	75	54.000	Astatotilapia_calliptera
ENSMZEG00005025729	-	87	52.880	ENSAMXG00000041650	-	85	52.880	Astyanax_mexicanus
ENSMZEG00005025729	-	91	48.085	ENSAMXG00000029660	-	51	48.085	Astyanax_mexicanus
ENSMZEG00005025729	-	89	52.018	ENSAMXG00000043291	-	78	52.018	Astyanax_mexicanus
ENSMZEG00005025729	-	91	36.257	ENSCSEG00000015585	-	74	36.257	Cynoglossus_semilaevis
ENSMZEG00005025729	-	89	47.619	ENSDARG00000103530	zgc:113102	93	47.619	Danio_rerio
ENSMZEG00005025729	-	99	45.536	ENSDARG00000116765	zgc:162962	91	45.333	Danio_rerio
ENSMZEG00005025729	-	92	47.000	ENSDARG00000053165	zgc:113377	80	47.000	Danio_rerio
ENSMZEG00005025729	-	98	45.270	ENSDARG00000078159	zgc:175284	94	45.270	Danio_rerio
ENSMZEG00005025729	-	88	51.376	ENSDARG00000097521	si:dkey-111k8.5	88	51.376	Danio_rerio
ENSMZEG00005025729	-	89	50.673	ENSDARG00000103777	znf1001	98	50.673	Danio_rerio
ENSMZEG00005025729	-	87	51.031	ENSDARG00000078814	si:dkey-34m19.3	86	51.031	Danio_rerio
ENSMZEG00005025729	-	89	49.541	ENSDARG00000099731	CABZ01066719.1	96	49.541	Danio_rerio
ENSMZEG00005025729	-	95	49.419	ENSDARG00000099890	CU207221.2	99	49.419	Danio_rerio
ENSMZEG00005025729	-	95	47.475	ENSDARG00000100361	znf1174	83	47.475	Danio_rerio
ENSMZEG00005025729	-	88	50.350	ENSDARG00000115857	znf1001	94	50.350	Danio_rerio
ENSMZEG00005025729	-	88	50.350	ENSDARG00000102401	znf1001	94	50.350	Danio_rerio
ENSMZEG00005025729	-	91	49.321	ENSDARG00000109703	FO834825.1	82	49.321	Danio_rerio
ENSMZEG00005025729	-	93	41.949	ENSEBUG00000015073	-	78	41.949	Eptatretus_burgeri
ENSMZEG00005025729	-	95	48.980	ENSFHEG00000013152	-	65	48.980	Fundulus_heteroclitus
ENSMZEG00005025729	-	89	48.673	ENSFHEG00000018009	-	51	48.673	Fundulus_heteroclitus
ENSMZEG00005025729	-	93	44.615	ENSFHEG00000018209	-	71	43.404	Fundulus_heteroclitus
ENSMZEG00005025729	-	88	47.436	ENSFHEG00000014023	-	50	46.341	Fundulus_heteroclitus
ENSMZEG00005025729	-	95	46.465	ENSHBUG00000009953	-	89	46.465	Haplochromis_burtoni
ENSMZEG00005025729	-	95	56.579	ENSHBUG00000018916	-	86	56.579	Haplochromis_burtoni
ENSMZEG00005025729	-	89	47.581	ENSKMAG00000009563	-	75	47.581	Kryptolebias_marmoratus
ENSMZEG00005025729	-	94	44.565	ENSKMAG00000014629	-	88	44.565	Kryptolebias_marmoratus
ENSMZEG00005025729	-	90	47.368	ENSLBEG00000020461	-	56	47.368	Labrus_bergylta
ENSMZEG00005025729	-	95	48.503	ENSMAMG00000014743	-	67	48.503	Mastacembelus_armatus
ENSMZEG00005025729	-	89	56.061	ENSMZEG00005027793	-	74	56.061	Maylandia_zebra
ENSMZEG00005025729	-	95	36.683	ENSMZEG00005005162	-	73	36.683	Maylandia_zebra
ENSMZEG00005025729	-	89	56.579	ENSMZEG00005007426	-	65	56.579	Maylandia_zebra
ENSMZEG00005025729	-	89	39.810	ENSMZEG00005025568	-	79	39.810	Maylandia_zebra
ENSMZEG00005025729	-	87	41.667	ENSMZEG00005021426	-	75	41.667	Maylandia_zebra
ENSMZEG00005025729	-	99	51.163	ENSMZEG00005027943	-	97	54.634	Maylandia_zebra
ENSMZEG00005025729	-	91	36.232	ENSMZEG00005022161	-	88	36.232	Maylandia_zebra
ENSMZEG00005025729	-	95	53.960	ENSMZEG00005026470	-	80	53.960	Maylandia_zebra
ENSMZEG00005025729	-	92	37.788	ENSMALG00000008638	-	63	38.208	Monopterus_albus
ENSMZEG00005025729	-	94	45.575	ENSMALG00000018074	-	66	45.575	Monopterus_albus
ENSMZEG00005025729	-	95	53.571	ENSNBRG00000000577	-	79	53.571	Neolamprologus_brichardi
ENSMZEG00005025729	-	89	42.152	ENSONIG00000013908	-	100	42.152	Oreochromis_niloticus
ENSMZEG00005025729	-	89	40.000	ENSONIG00000006585	-	96	40.000	Oreochromis_niloticus
ENSMZEG00005025729	-	89	41.379	ENSONIG00000003363	-	99	41.379	Oreochromis_niloticus
ENSMZEG00005025729	-	90	44.643	ENSORLG00020019341	-	75	55.814	Oryzias_latipes_hni
ENSMZEG00005025729	-	91	42.857	ENSPKIG00000018633	-	53	42.857	Paramormyrops_kingsleyae
ENSMZEG00005025729	-	89	41.727	ENSPKIG00000020324	-	52	41.727	Paramormyrops_kingsleyae
ENSMZEG00005025729	-	87	44.643	ENSPMGG00000001558	znf1174	53	44.643	Periophthalmus_magnuspinnatus
ENSMZEG00005025729	-	92	42.718	ENSPFOG00000011766	-	98	42.718	Poecilia_formosa
ENSMZEG00005025729	-	87	44.961	ENSPFOG00000001144	-	99	43.043	Poecilia_formosa
ENSMZEG00005025729	-	97	46.243	ENSPLAG00000016561	zgc:113348	94	46.637	Poecilia_latipinna
ENSMZEG00005025729	-	91	42.623	ENSPMEG00000007573	zgc:113343	63	42.623	Poecilia_mexicana
ENSMZEG00005025729	-	91	38.554	ENSPREG00000005538	-	73	37.824	Poecilia_reticulata
ENSMZEG00005025729	-	96	43.367	ENSPREG00000014105	-	87	43.367	Poecilia_reticulata
ENSMZEG00005025729	-	91	44.910	ENSPREG00000001514	zgc:113343	64	44.910	Poecilia_reticulata
ENSMZEG00005025729	-	89	38.261	ENSPNYG00000024183	zgc:173577	99	39.535	Pundamilia_nyererei
ENSMZEG00005025729	-	83	56.250	ENSSDUG00000008682	-	93	56.250	Seriola_dumerili
ENSMZEG00005025729	-	88	40.000	ENSSPAG00000006539	-	96	40.000	Stegastes_partitus
ENSMZEG00005025729	-	93	40.708	ENSSPAG00000009426	-	82	40.351	Stegastes_partitus
ENSMZEG00005025729	-	89	47.573	ENSSPAG00000013109	si:ch211-241b2.1	72	47.573	Stegastes_partitus
ENSMZEG00005025729	-	93	42.857	ENSTNIG00000000277	-	99	42.857	Tetraodon_nigroviridis
ENSMZEG00005025729	-	91	43.169	ENSXCOG00000017871	zgc:113343	66	43.169	Xiphophorus_couchianus
ENSMZEG00005025729	-	91	43.169	ENSXMAG00000019923	zgc:113343	64	43.169	Xiphophorus_maculatus