EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005025873 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 24884 bases
Position: chrAGTA05000359.1:77396-102279
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034622	zf-CCHC	PF00098.23	4.8e-27	1	3
ENSMZEP00005034622	zf-CCHC	PF00098.23	4.8e-27	2	3
ENSMZEP00005034622	zf-CCHC	PF00098.23	4.8e-27	3	3
ENSMZEP00005034620	zf-CCHC	PF00098.23	5.7e-23	1	3
ENSMZEP00005034620	zf-CCHC	PF00098.23	5.7e-23	2	3
ENSMZEP00005034620	zf-CCHC	PF00098.23	5.7e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005035844	-	681	-	ENSMZEP00005034620	226 (aa)	-	-
ENSMZET00005035846	-	690	-	ENSMZEP00005034622	229 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005025873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005025873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005025873	-	84	40.909	ENSATEG00000004599	-	58	40.909	Anabas_testudineus
ENSMZEG00005025873	-	90	83.636	ENSACLG00000019919	-	69	83.636	Astatotilapia_calliptera
ENSMZEG00005025873	-	62	34.568	ENSAMXG00000035711	-	54	30.088	Astyanax_mexicanus
ENSMZEG00005025873	-	78	46.875	ENSGACG00000000773	-	53	48.387	Gasterosteus_aculeatus
ENSMZEG00005025873	-	78	48.438	ENSGACG00000018075	-	52	49.438	Gasterosteus_aculeatus
ENSMZEG00005025873	-	86	83.636	ENSHBUG00000001589	-	51	83.636	Haplochromis_burtoni
ENSMZEG00005025873	-	78	38.462	ENSLOCG00000010606	-	81	38.462	Lepisosteus_oculatus
ENSMZEG00005025873	-	81	50.000	ENSLOCG00000017670	-	51	50.000	Lepisosteus_oculatus
ENSMZEG00005025873	-	75	60.000	ENSLOCG00000017328	-	53	50.549	Lepisosteus_oculatus
ENSMZEG00005025873	-	67	45.161	ENSLOCG00000017530	-	54	45.161	Lepisosteus_oculatus
ENSMZEG00005025873	-	77	39.535	ENSLOCG00000018355	-	60	39.535	Lepisosteus_oculatus
ENSMZEG00005025873	-	88	48.485	ENSLOCG00000000361	-	77	48.485	Lepisosteus_oculatus
ENSMZEG00005025873	-	74	47.368	ENSLOCG00000017305	-	58	42.593	Lepisosteus_oculatus
ENSMZEG00005025873	-	63	48.148	ENSLOCG00000017503	-	51	48.148	Lepisosteus_oculatus
ENSMZEG00005025873	-	79	46.835	ENSLOCG00000017824	-	56	46.835	Lepisosteus_oculatus
ENSMZEG00005025873	-	89	50.633	ENSLOCG00000000602	-	80	50.633	Lepisosteus_oculatus
ENSMZEG00005025873	-	75	45.455	ENSLOCG00000017641	-	59	49.412	Lepisosteus_oculatus
ENSMZEG00005025873	-	78	52.273	ENSLOCG00000017327	-	56	52.273	Lepisosteus_oculatus
ENSMZEG00005025873	-	89	41.304	ENSLOCG00000012680	-	76	48.387	Lepisosteus_oculatus
ENSMZEG00005025873	-	77	45.312	ENSLOCG00000000297	-	77	45.652	Lepisosteus_oculatus
ENSMZEG00005025873	-	79	48.438	ENSLOCG00000000632	-	68	48.438	Lepisosteus_oculatus
ENSMZEG00005025873	-	81	48.913	ENSLOCG00000017639	-	51	48.913	Lepisosteus_oculatus
ENSMZEG00005025873	-	76	46.512	ENSLOCG00000006695	-	51	44.944	Lepisosteus_oculatus
ENSMZEG00005025873	-	72	42.308	ENSLOCG00000008338	-	80	42.308	Lepisosteus_oculatus
ENSMZEG00005025873	-	77	43.077	ENSLOCG00000000320	-	75	40.777	Lepisosteus_oculatus
ENSMZEG00005025873	-	83	42.857	ENSLOCG00000017666	-	89	42.857	Lepisosteus_oculatus
ENSMZEG00005025873	-	90	78.947	ENSMZEG00005028547	-	70	81.560	Maylandia_zebra
ENSMZEG00005025873	-	90	45.045	ENSPKIG00000015924	-	83	45.045	Paramormyrops_kingsleyae
ENSMZEG00005025873	-	83	45.455	ENSPNYG00000015964	-	72	45.455	Pundamilia_nyererei
ENSMZEG00005025873	-	77	43.478	ENSPNAG00000007153	-	50	43.636	Pygocentrus_nattereri
ENSMZEG00005025873	-	86	43.636	ENSPNAG00000002955	-	74	43.636	Pygocentrus_nattereri
ENSMZEG00005025873	-	90	48.315	ENSSFOG00015016511	-	68	48.315	Scleropages_formosus
ENSMZEG00005025873	-	97	43.103	ENSSFOG00015012405	-	53	43.103	Scleropages_formosus
ENSMZEG00005025873	-	80	42.188	ENSXETG00000032242	-	81	42.188	Xenopus_tropicalis
ENSMZEG00005025873	-	79	46.154	ENSXETG00000030090	-	51	47.170	Xenopus_tropicalis
ENSMZEG00005025873	-	62	39.706	ENSXETG00000033641	-	63	36.275	Xenopus_tropicalis
ENSMZEG00005025873	-	87	40.206	ENSXETG00000030161	-	80	40.206	Xenopus_tropicalis
ENSMZEG00005025873	-	78	54.237	ENSXETG00000033341	-	75	55.172	Xenopus_tropicalis
ENSMZEG00005025873	-	75	46.875	ENSXETG00000033143	-	82	47.297	Xenopus_tropicalis
ENSMZEG00005025873	-	57	35.821	ENSXETG00000034305	-	62	35.294	Xenopus_tropicalis
ENSMZEG00005025873	-	73	47.727	ENSXMAG00000024371	-	83	47.727	Xiphophorus_maculatus