EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026001 (Gene tree)
Gene ID: 101476873
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 3930 bases
Position: chrLG20:18441957-18445886
Accession: 101476873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034780	FDF	PF09532.10	6.6e-13	1	1
ENSMZEP00005034780	SM-ATX	PF14438.6	3.1e-07	1	1
ENSMZEP00005034780	LSM14	PF12701.7	3.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036018	LSM14B (1 of many)-201	2356	XM_004546197	ENSMZEP00005034780	375 (aa)	XP_004546254	UPI000D327A8C

Gene Model

Click here to download ENSMZEG00005026001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026001	LSM14B	94	46.316	ENSG00000149657	LSM14B	98	43.354	Homo_sapiens
ENSMZEG00005026001	LSM14B	93	50.284	ENSAPOG00000001780	lsm14b	91	47.765	Acanthochromis_polyacanthus
ENSMZEG00005026001	LSM14B	94	45.455	ENSAMEG00000013430	LSM14B	92	43.237	Ailuropoda_melanoleuca
ENSMZEG00005026001	LSM14B	93	48.433	ENSACIG00000012266	lsm14b	91	46.369	Amphilophus_citrinellus
ENSMZEG00005026001	LSM14B	65	55.512	ENSACIG00000003147	LSM14B	90	56.154	Amphilophus_citrinellus
ENSMZEG00005026001	LSM14B	98	65.775	ENSAOCG00000006667	LSM14B	91	64.903	Amphiprion_ocellaris
ENSMZEG00005026001	LSM14B	93	49.288	ENSAOCG00000012380	lsm14b	91	47.765	Amphiprion_ocellaris
ENSMZEG00005026001	LSM14B	93	45.170	ENSAPEG00000023633	lsm14b	90	46.089	Amphiprion_percula
ENSMZEG00005026001	LSM14B	93	50.857	ENSATEG00000016603	lsm14b	91	50.140	Anabas_testudineus
ENSMZEG00005026001	LSM14B	76	58.940	ENSATEG00000015895	LSM14B	90	56.794	Anabas_testudineus
ENSMZEG00005026001	LSM14B	87	41.953	ENSAPLG00000013203	LSM14B	93	40.731	Anas_platyrhynchos
ENSMZEG00005026001	LSM14B	94	49.189	ENSACAG00000016195	LSM14B	91	48.518	Anolis_carolinensis
ENSMZEG00005026001	LSM14B	94	49.589	ENSANAG00000037915	LSM14B	91	48.525	Aotus_nancymaae
ENSMZEG00005026001	LSM14B	59	80.455	ENSACLG00000011955	-	68	82.039	Astatotilapia_calliptera
ENSMZEG00005026001	LSM14B	59	83.182	ENSACLG00000019624	-	69	84.951	Astatotilapia_calliptera
ENSMZEG00005026001	LSM14B	59	72.273	ENSACLG00000008384	-	66	73.786	Astatotilapia_calliptera
ENSMZEG00005026001	LSM14B	93	49.153	ENSACLG00000019663	lsm14b	91	48.199	Astatotilapia_calliptera
ENSMZEG00005026001	LSM14B	93	54.121	ENSAMXG00000002865	lsm14b	91	54.201	Astyanax_mexicanus
ENSMZEG00005026001	LSM14B	94	45.297	ENSBTAG00000021558	LSM14B	92	43.171	Bos_taurus
ENSMZEG00005026001	LSM14B	94	46.579	ENSCJAG00000014434	LSM14B	91	48.238	Callithrix_jacchus
ENSMZEG00005026001	LSM14B	85	42.473	ENSCAFG00000012518	LSM14B	91	40.897	Canis_familiaris
ENSMZEG00005026001	LSM14B	94	50.273	ENSCAFG00020022150	LSM14B	91	48.525	Canis_lupus_dingo
ENSMZEG00005026001	LSM14B	94	49.863	ENSCHIG00000010284	-	91	47.989	Capra_hircus
ENSMZEG00005026001	LSM14B	95	38.753	ENSCHIG00000022681	-	91	37.741	Capra_hircus
ENSMZEG00005026001	LSM14B	84	44.186	ENSTSYG00000031914	LSM14B	81	45.882	Carlito_syrichta
ENSMZEG00005026001	LSM14B	85	46.567	ENSCAPG00000013059	LSM14B	92	45.455	Cavia_aperea
ENSMZEG00005026001	LSM14B	84	46.707	ENSCPOG00000038080	LSM14B	92	45.588	Cavia_porcellus
ENSMZEG00005026001	LSM14B	94	46.579	ENSCCAG00000021267	LSM14B	91	47.872	Cebus_capucinus
ENSMZEG00005026001	LSM14B	94	34.530	ENSCCAG00000024900	-	73	34.316	Cebus_capucinus
ENSMZEG00005026001	LSM14B	94	45.789	ENSCATG00000036006	LSM14B	91	47.340	Cercocebus_atys
ENSMZEG00005026001	LSM14B	84	47.006	ENSCLAG00000003186	LSM14B	92	46.176	Chinchilla_lanigera
ENSMZEG00005026001	LSM14B	94	42.721	ENSCSAG00000015729	LSM14B	92	43.373	Chlorocebus_sabaeus
ENSMZEG00005026001	LSM14B	94	45.432	ENSCPBG00000027065	LSM14B	92	44.472	Chrysemys_picta_bellii
ENSMZEG00005026001	LSM14B	84	43.605	ENSCANG00000036986	LSM14B	92	45.294	Colobus_angolensis_palliatus
ENSMZEG00005026001	LSM14B	94	49.189	ENSCGRG00001018399	Lsm14b	91	47.872	Cricetulus_griseus_chok1gshd
ENSMZEG00005026001	LSM14B	65	37.838	ENSCGRG00000006111	-	93	38.406	Cricetulus_griseus_crigri
ENSMZEG00005026001	LSM14B	93	48.361	ENSCSEG00000004722	lsm14b	92	46.825	Cynoglossus_semilaevis
ENSMZEG00005026001	LSM14B	99	57.029	ENSCSEG00000020669	LSM14B	92	57.895	Cynoglossus_semilaevis
ENSMZEG00005026001	LSM14B	69	48.315	ENSCVAG00000012433	-	83	62.500	Cyprinodon_variegatus
ENSMZEG00005026001	LSM14B	94	48.493	ENSDARG00000025386	lsm14b	91	48.087	Danio_rerio
ENSMZEG00005026001	LSM14B	65	35.294	ENSDNOG00000025246	LSM14B	90	37.954	Dasypus_novemcinctus
ENSMZEG00005026001	LSM14B	85	47.181	ENSDORG00000016683	Lsm14b	90	37.294	Dipodomys_ordii
ENSMZEG00005026001	LSM14B	95	42.933	ENSETEG00000001869	-	91	40.374	Echinops_telfairi
ENSMZEG00005026001	LSM14B	59	40.598	ENSETEG00000011188	-	91	39.827	Echinops_telfairi
ENSMZEG00005026001	LSM14B	65	40.476	ENSEASG00005023218	LSM14B	90	36.824	Equus_asinus_asinus
ENSMZEG00005026001	LSM14B	94	49.459	ENSECAG00000010659	LSM14B	91	48.509	Equus_caballus
ENSMZEG00005026001	LSM14B	55	61.000	ENSEEUG00000007331	LSM14B	74	56.250	Erinaceus_europaeus
ENSMZEG00005026001	LSM14B	98	53.298	ENSELUG00000005780	lsm14b	92	52.055	Esox_lucius
ENSMZEG00005026001	LSM14B	93	53.693	ENSELUG00000016299	LSM14B	91	52.089	Esox_lucius
ENSMZEG00005026001	LSM14B	94	50.681	ENSFCAG00000003248	LSM14B	91	48.404	Felis_catus
ENSMZEG00005026001	LSM14B	85	41.555	ENSFALG00000010618	LSM14B	93	40.800	Ficedula_albicollis
ENSMZEG00005026001	LSM14B	84	46.707	ENSFDAG00000002214	LSM14B	92	45.294	Fukomys_damarensis
ENSMZEG00005026001	LSM14B	94	47.368	ENSFHEG00000006237	lsm14b	90	45.580	Fundulus_heteroclitus
ENSMZEG00005026001	LSM14B	85	63.190	ENSFHEG00000003362	LSM14B	82	60.909	Fundulus_heteroclitus
ENSMZEG00005026001	LSM14B	77	63.855	ENSGMOG00000017115	lsm14b	89	47.753	Gadus_morhua
ENSMZEG00005026001	LSM14B	94	47.439	ENSGALG00000005125	LSM14B	91	48.118	Gallus_gallus
ENSMZEG00005026001	LSM14B	69	52.874	ENSGAFG00000013723	LSM14B	89	51.417	Gambusia_affinis
ENSMZEG00005026001	LSM14B	93	41.360	ENSGAFG00000020318	lsm14b	91	39.722	Gambusia_affinis
ENSMZEG00005026001	LSM14B	95	49.584	ENSGACG00000009973	lsm14b	93	48.611	Gasterosteus_aculeatus
ENSMZEG00005026001	LSM14B	62	39.506	ENSGAGG00000004106	LSM14B	79	41.071	Gopherus_agassizii
ENSMZEG00005026001	LSM14B	87	44.928	ENSGGOG00000005630	LSM14B	88	44.286	Gorilla_gorilla
ENSMZEG00005026001	LSM14B	94	49.459	ENSHGLG00000015055	LSM14B	91	48.138	Heterocephalus_glaber_female
ENSMZEG00005026001	LSM14B	84	45.015	ENSHGLG00100015273	LSM14B	91	43.787	Heterocephalus_glaber_male
ENSMZEG00005026001	LSM14B	99	61.538	ENSHCOG00000018747	LSM14B	93	60.440	Hippocampus_comes
ENSMZEG00005026001	LSM14B	65	39.919	ENSHCOG00000004867	lsm14b	87	37.751	Hippocampus_comes
ENSMZEG00005026001	LSM14B	93	51.934	ENSIPUG00000014946	lsm14b	86	51.220	Ictalurus_punctatus
ENSMZEG00005026001	LSM14B	84	46.450	ENSSTOG00000020482	LSM14B	92	45.588	Ictidomys_tridecemlineatus
ENSMZEG00005026001	LSM14B	94	50.000	ENSJJAG00000012728	Lsm14b	91	48.670	Jaculus_jaculus
ENSMZEG00005026001	LSM14B	93	48.169	ENSKMAG00000017524	lsm14b	92	46.240	Kryptolebias_marmoratus
ENSMZEG00005026001	LSM14B	55	57.619	ENSKMAG00000012834	-	89	58.019	Kryptolebias_marmoratus
ENSMZEG00005026001	LSM14B	51	70.769	ENSLBEG00000007951	LSM14B	78	71.053	Labrus_bergylta
ENSMZEG00005026001	LSM14B	93	50.693	ENSLOCG00000003746	lsm14b	91	50.272	Lepisosteus_oculatus
ENSMZEG00005026001	LSM14B	85	43.391	ENSLAFG00000007492	LSM14B	92	45.349	Loxodonta_africana
ENSMZEG00005026001	LSM14B	94	46.316	ENSMFAG00000041479	LSM14B	91	47.872	Macaca_fascicularis
ENSMZEG00005026001	LSM14B	94	46.316	ENSMMUG00000014084	LSM14B	91	47.872	Macaca_mulatta
ENSMZEG00005026001	LSM14B	94	46.316	ENSMNEG00000045573	LSM14B	91	47.872	Macaca_nemestrina
ENSMZEG00005026001	LSM14B	84	42.733	ENSMLEG00000040895	LSM14B	92	44.412	Mandrillus_leucophaeus
ENSMZEG00005026001	LSM14B	93	48.442	ENSMAMG00000020539	lsm14b	91	47.222	Mastacembelus_armatus
ENSMZEG00005026001	LSM14B	99	64.362	ENSMAMG00000024124	LSM14B	92	64.345	Mastacembelus_armatus
ENSMZEG00005026001	LSM14B	59	75.909	ENSMZEG00005002688	-	67	73.301	Maylandia_zebra
ENSMZEG00005026001	LSM14B	93	49.153	ENSMZEG00005000987	lsm14b	91	48.199	Maylandia_zebra
ENSMZEG00005026001	LSM14B	59	75.909	ENSMZEG00005026087	-	67	73.301	Maylandia_zebra
ENSMZEG00005026001	LSM14B	87	42.897	ENSMGAG00000005300	LSM14B	92	45.170	Meleagris_gallopavo
ENSMZEG00005026001	LSM14B	94	48.257	ENSMAUG00000020700	Lsm14b	91	46.842	Mesocricetus_auratus
ENSMZEG00005026001	LSM14B	94	47.368	ENSMICG00000014675	LSM14B	91	48.670	Microcebus_murinus
ENSMZEG00005026001	LSM14B	94	49.459	ENSMOCG00000020600	Lsm14b	91	47.105	Microtus_ochrogaster
ENSMZEG00005026001	LSM14B	56	39.726	ENSMOCG00000005119	-	93	33.673	Microtus_ochrogaster
ENSMZEG00005026001	LSM14B	93	45.135	ENSMMOG00000020042	lsm14b	94	44.709	Mola_mola
ENSMZEG00005026001	LSM14B	95	60.504	ENSMMOG00000017321	LSM14B	92	57.778	Mola_mola
ENSMZEG00005026001	LSM14B	65	38.832	ENSMODG00000016690	LSM14B	90	37.838	Monodelphis_domestica
ENSMZEG00005026001	LSM14B	99	48.396	ENSMALG00000004783	lsm14b	93	44.715	Monopterus_albus
ENSMZEG00005026001	LSM14B	95	67.131	ENSMALG00000022251	LSM14B	92	66.852	Monopterus_albus
ENSMZEG00005026001	LSM14B	94	48.767	MGP_CAROLIEiJ_G0024770	Lsm14b	91	46.842	Mus_caroli
ENSMZEG00005026001	LSM14B	94	48.767	ENSMUSG00000039108	Lsm14b	91	46.842	Mus_musculus
ENSMZEG00005026001	LSM14B	94	49.589	MGP_PahariEiJ_G0026214	Lsm14b	91	47.632	Mus_pahari
ENSMZEG00005026001	LSM14B	94	48.767	MGP_SPRETEiJ_G0025693	Lsm14b	91	46.842	Mus_spretus
ENSMZEG00005026001	LSM14B	90	41.985	ENSMPUG00000007584	LSM14B	93	41.476	Mustela_putorius_furo
ENSMZEG00005026001	LSM14B	93	49.162	ENSMLUG00000000304	LSM14B	91	48.387	Myotis_lucifugus
ENSMZEG00005026001	LSM14B	57	41.558	ENSNGAG00000016550	Lsm14b	87	41.667	Nannospalax_galili
ENSMZEG00005026001	LSM14B	84	43.314	ENSNLEG00000015757	LSM14B	92	45.000	Nomascus_leucogenys
ENSMZEG00005026001	LSM14B	66	64.286	ENSMEUG00000008267	-	66	63.636	Notamacropus_eugenii
ENSMZEG00005026001	LSM14B	94	49.459	ENSODEG00000004099	LSM14B	91	48.404	Octodon_degus
ENSMZEG00005026001	LSM14B	93	49.288	ENSONIG00000020318	lsm14b	92	48.780	Oreochromis_niloticus
ENSMZEG00005026001	LSM14B	77	45.763	ENSOANG00000003370	LSM14B	97	44.062	Ornithorhynchus_anatinus
ENSMZEG00005026001	LSM14B	85	44.509	ENSOCUG00000006279	LSM14B	92	46.567	Oryctolagus_cuniculus
ENSMZEG00005026001	LSM14B	96	60.109	ENSORLG00000028353	LSM14B	93	58.791	Oryzias_latipes
ENSMZEG00005026001	LSM14B	93	46.307	ENSORLG00000013525	lsm14b	91	43.733	Oryzias_latipes
ENSMZEG00005026001	LSM14B	93	46.307	ENSORLG00020020553	lsm14b	91	43.733	Oryzias_latipes_hni
ENSMZEG00005026001	LSM14B	96	60.656	ENSORLG00015013157	LSM14B	93	59.341	Oryzias_latipes_hsok
ENSMZEG00005026001	LSM14B	93	46.307	ENSORLG00015016862	lsm14b	91	43.733	Oryzias_latipes_hsok
ENSMZEG00005026001	LSM14B	93	46.875	ENSOMEG00000023917	lsm14b	91	44.011	Oryzias_melastigma
ENSMZEG00005026001	LSM14B	94	46.005	ENSOGAG00000003915	LSM14B	92	44.578	Otolemur_garnettii
ENSMZEG00005026001	LSM14B	86	42.021	ENSOARG00000014706	LSM14B	92	39.323	Ovis_aries
ENSMZEG00005026001	LSM14B	87	44.928	ENSPPAG00000035799	LSM14B	88	44.286	Pan_paniscus
ENSMZEG00005026001	LSM14B	94	50.136	ENSPPRG00000009197	LSM14B	91	49.051	Panthera_pardus
ENSMZEG00005026001	LSM14B	65	40.476	ENSPTIG00000021518	LSM14B	93	37.667	Panthera_tigris_altaica
ENSMZEG00005026001	LSM14B	94	46.316	ENSPTRG00000013696	LSM14B	91	47.872	Pan_troglodytes
ENSMZEG00005026001	LSM14B	94	46.053	ENSPANG00000011747	LSM14B	91	47.606	Papio_anubis
ENSMZEG00005026001	LSM14B	94	50.838	ENSPKIG00000003275	lsm14b	83	73.333	Paramormyrops_kingsleyae
ENSMZEG00005026001	LSM14B	85	46.866	ENSPSIG00000014762	LSM14B	92	45.266	Pelodiscus_sinensis
ENSMZEG00005026001	LSM14B	94	48.919	ENSPEMG00000017688	Lsm14b	92	47.453	Peromyscus_maniculatus_bairdii
ENSMZEG00005026001	LSM14B	94	49.863	ENSPCIG00000013405	LSM14B	91	49.051	Phascolarctos_cinereus
ENSMZEG00005026001	LSM14B	96	47.802	ENSPFOG00000005631	lsm14b	91	44.504	Poecilia_formosa
ENSMZEG00005026001	LSM14B	93	62.040	ENSPLAG00000005793	LSM14B	92	60.388	Poecilia_latipinna
ENSMZEG00005026001	LSM14B	96	47.527	ENSPLAG00000002449	lsm14b	91	43.889	Poecilia_latipinna
ENSMZEG00005026001	LSM14B	93	62.393	ENSPMEG00000022953	LSM14B	92	60.665	Poecilia_mexicana
ENSMZEG00005026001	LSM14B	94	47.339	ENSPMEG00000000745	lsm14b	91	43.889	Poecilia_mexicana
ENSMZEG00005026001	LSM14B	65	51.515	ENSPREG00000007828	LSM14B	89	48.864	Poecilia_reticulata
ENSMZEG00005026001	LSM14B	94	50.000	ENSPCOG00000013625	LSM14B	91	48.670	Propithecus_coquereli
ENSMZEG00005026001	LSM14B	93	52.925	ENSPNAG00000012777	lsm14b	91	51.075	Pygocentrus_nattereri
ENSMZEG00005026001	LSM14B	94	44.554	ENSRNOG00000054557	Lsm14b	92	42.959	Rattus_norvegicus
ENSMZEG00005026001	LSM14B	85	43.768	ENSRBIG00000033461	LSM14B	91	45.455	Rhinopithecus_bieti
ENSMZEG00005026001	LSM14B	86	44.160	ENSRROG00000042949	LSM14B	83	45.821	Rhinopithecus_roxellana
ENSMZEG00005026001	LSM14B	84	46.108	ENSSBOG00000032820	LSM14B	92	44.807	Saimiri_boliviensis_boliviensis
ENSMZEG00005026001	LSM14B	85	48.348	ENSSHAG00000015528	LSM14B	89	46.334	Sarcophilus_harrisii
ENSMZEG00005026001	LSM14B	93	49.148	ENSSFOG00015004627	lsm14b	92	50.693	Scleropages_formosus
ENSMZEG00005026001	LSM14B	99	66.057	ENSSMAG00000000135	LSM14B	92	65.301	Scophthalmus_maximus
ENSMZEG00005026001	LSM14B	93	49.288	ENSSMAG00000012725	lsm14b	91	49.162	Scophthalmus_maximus
ENSMZEG00005026001	LSM14B	93	50.565	ENSSDUG00000020977	lsm14b	91	50.556	Seriola_dumerili
ENSMZEG00005026001	LSM14B	95	69.529	ENSSDUG00000022770	LSM14B	92	68.975	Seriola_dumerili
ENSMZEG00005026001	LSM14B	65	56.923	ENSSLDG00000011354	-	90	56.061	Seriola_lalandi_dorsalis
ENSMZEG00005026001	LSM14B	54	39.269	ENSSARG00000007749	-	96	37.615	Sorex_araneus
ENSMZEG00005026001	LSM14B	94	45.567	ENSSPUG00000014360	LSM14B	92	46.667	Sphenodon_punctatus
ENSMZEG00005026001	LSM14B	93	49.003	ENSSPAG00000020915	lsm14b	90	48.045	Stegastes_partitus
ENSMZEG00005026001	LSM14B	70	50.714	ENSSPAG00000018854	-	89	46.947	Stegastes_partitus
ENSMZEG00005026001	LSM14B	94	49.315	ENSSSCG00000026052	LSM14B	69	62.879	Sus_scrofa
ENSMZEG00005026001	LSM14B	85	46.707	ENSTGUG00000007884	LSM14B	92	45.833	Taeniopygia_guttata
ENSMZEG00005026001	LSM14B	95	65.470	ENSTRUG00000001529	LSM14B	92	64.641	Takifugu_rubripes
ENSMZEG00005026001	LSM14B	98	48.787	ENSTRUG00000011354	lsm14b	91	48.739	Takifugu_rubripes
ENSMZEG00005026001	LSM14B	94	47.554	ENSTNIG00000002445	lsm14b	91	47.326	Tetraodon_nigroviridis
ENSMZEG00005026001	LSM14B	93	45.330	ENSUAMG00000025298	LSM14B	91	43.396	Ursus_americanus
ENSMZEG00005026001	LSM14B	93	45.330	ENSUMAG00000000480	LSM14B	91	43.396	Ursus_maritimus
ENSMZEG00005026001	LSM14B	85	47.447	ENSVVUG00000015920	LSM14B	90	45.294	Vulpes_vulpes
ENSMZEG00005026001	LSM14B	87	45.723	ENSXETG00000001997	lsm14b	97	44.675	Xenopus_tropicalis
ENSMZEG00005026001	LSM14B	93	46.307	ENSXMAG00000010013	lsm14b	91	44.290	Xiphophorus_maculatus