EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026015 (Gene tree)
Gene ID: 112432926
Gene Symbol: sf3b3 (1 of many)
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3B subunit 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 17671 bases
Position: chrAGTA05000701.1:55419-73089
Accession: 112432926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034801	CPSF_A	PF03178.15	8.2e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036039	-	3177	XM_024801322	ENSMZEP00005034801	1058 (aa)	XP_024657090	-

Gene Model

Click here to download ENSMZEG00005026015's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026015	sf3b3	99	90.194	ENSG00000189091	SF3B3	97	90.909	Homo_sapiens
ENSMZEG00005026015	sf3b3	95	95.459	ENSAPOG00000006172	sf3b3	87	95.459	Acanthochromis_polyacanthus
ENSMZEG00005026015	sf3b3	99	90.287	ENSAMEG00000002187	SF3B3	89	90.287	Ailuropoda_melanoleuca
ENSMZEG00005026015	sf3b3	99	99.332	ENSACIG00000016487	sf3b3	96	99.332	Amphilophus_citrinellus
ENSMZEG00005026015	sf3b3	99	95.745	ENSAOCG00000007158	sf3b3	89	95.745	Amphiprion_ocellaris
ENSMZEG00005026015	sf3b3	99	95.745	ENSAPEG00000022786	sf3b3	89	95.745	Amphiprion_percula
ENSMZEG00005026015	sf3b3	99	95.560	ENSATEG00000013708	sf3b3	89	95.560	Anabas_testudineus
ENSMZEG00005026015	sf3b3	80	94.340	ENSAPLG00000004996	SF3B3	86	94.340	Anas_platyrhynchos
ENSMZEG00005026015	sf3b3	99	90.472	ENSACAG00000001817	SF3B3	89	90.472	Anolis_carolinensis
ENSMZEG00005026015	sf3b3	99	90.194	ENSANAG00000028001	SF3B3	89	90.194	Aotus_nancymaae
ENSMZEG00005026015	sf3b3	99	100.000	ENSACLG00000022555	sf3b3	96	100.000	Astatotilapia_calliptera
ENSMZEG00005026015	sf3b3	99	94.635	ENSAMXG00000003410	sf3b3	89	94.635	Astyanax_mexicanus
ENSMZEG00005026015	sf3b3	99	91.447	ENSBTAG00000010627	SF3B3	89	91.447	Bos_taurus
ENSMZEG00005026015	sf3b3	99	57.443	WBGene00019323	teg-4	89	57.443	Caenorhabditis_elegans
ENSMZEG00005026015	sf3b3	99	91.031	ENSCJAG00000014773	SF3B3	96	91.031	Callithrix_jacchus
ENSMZEG00005026015	sf3b3	99	90.287	ENSCAFG00000020151	SF3B3	89	90.287	Canis_familiaris
ENSMZEG00005026015	sf3b3	99	90.287	ENSCAFG00020020912	SF3B3	89	90.287	Canis_lupus_dingo
ENSMZEG00005026015	sf3b3	99	90.287	ENSCHIG00000019822	SF3B3	89	90.287	Capra_hircus
ENSMZEG00005026015	sf3b3	99	90.194	ENSTSYG00000007910	SF3B3	89	90.194	Carlito_syrichta
ENSMZEG00005026015	sf3b3	81	73.227	ENSCAPG00000001484	SF3B3	78	73.227	Cavia_aperea
ENSMZEG00005026015	sf3b3	99	88.807	ENSCPOG00000000586	SF3B3	89	88.807	Cavia_porcellus
ENSMZEG00005026015	sf3b3	99	90.194	ENSCCAG00000017736	SF3B3	89	90.194	Cebus_capucinus
ENSMZEG00005026015	sf3b3	99	90.194	ENSCATG00000036562	SF3B3	89	90.194	Cercocebus_atys
ENSMZEG00005026015	sf3b3	99	90.194	ENSCLAG00000003921	SF3B3	89	90.194	Chinchilla_lanigera
ENSMZEG00005026015	sf3b3	99	90.194	ENSCSAG00000004371	SF3B3	89	90.194	Chlorocebus_sabaeus
ENSMZEG00005026015	sf3b3	88	87.027	ENSCHOG00000001878	SF3B3	78	87.027	Choloepus_hoffmanni
ENSMZEG00005026015	sf3b3	99	89.824	ENSCPBG00000015853	SF3B3	89	89.824	Chrysemys_picta_bellii
ENSMZEG00005026015	sf3b3	99	77.726	ENSCING00000001342	-	89	77.726	Ciona_intestinalis
ENSMZEG00005026015	sf3b3	99	77.886	ENSCSAVG00000011454	-	89	76.340	Ciona_savignyi
ENSMZEG00005026015	sf3b3	99	88.480	ENSCANG00000042920	SF3B3	89	88.669	Colobus_angolensis_palliatus
ENSMZEG00005026015	sf3b3	99	90.102	ENSCGRG00001015908	Sf3b3	89	90.102	Cricetulus_griseus_chok1gshd
ENSMZEG00005026015	sf3b3	99	90.102	ENSCGRG00000010180	Sf3b3	89	90.102	Cricetulus_griseus_crigri
ENSMZEG00005026015	sf3b3	82	96.305	ENSCSEG00000014192	sf3b3	86	96.305	Cynoglossus_semilaevis
ENSMZEG00005026015	sf3b3	99	94.820	ENSCVAG00000010459	sf3b3	89	94.820	Cyprinodon_variegatus
ENSMZEG00005026015	sf3b3	99	94.183	ENSDARG00000103553	sf3b3	89	94.183	Danio_rerio
ENSMZEG00005026015	sf3b3	95	89.778	ENSDNOG00000043626	SF3B3	100	89.778	Dasypus_novemcinctus
ENSMZEG00005026015	sf3b3	99	90.194	ENSDORG00000014176	Sf3b3	89	90.194	Dipodomys_ordii
ENSMZEG00005026015	sf3b3	99	72.121	FBgn0035162	Sf3b3	89	72.121	Drosophila_melanogaster
ENSMZEG00005026015	sf3b3	76	99.010	ENSETEG00000002729	SF3B3	66	99.010	Echinops_telfairi
ENSMZEG00005026015	sf3b3	99	83.719	ENSEBUG00000006117	sf3b3	89	83.719	Eptatretus_burgeri
ENSMZEG00005026015	sf3b3	99	90.287	ENSEASG00005013376	SF3B3	89	90.287	Equus_asinus_asinus
ENSMZEG00005026015	sf3b3	99	90.287	ENSECAG00000014053	SF3B3	89	90.287	Equus_caballus
ENSMZEG00005026015	sf3b3	91	93.088	ENSEEUG00000015611	SF3B3	82	93.088	Erinaceus_europaeus
ENSMZEG00005026015	sf3b3	99	92.620	ENSELUG00000015417	sf3b3	89	92.620	Esox_lucius
ENSMZEG00005026015	sf3b3	99	90.287	ENSFCAG00000009487	SF3B3	89	90.287	Felis_catus
ENSMZEG00005026015	sf3b3	99	90.102	ENSFALG00000007372	SF3B3	89	90.102	Ficedula_albicollis
ENSMZEG00005026015	sf3b3	99	90.194	ENSFDAG00000002608	SF3B3	89	90.194	Fukomys_damarensis
ENSMZEG00005026015	sf3b3	99	95.282	ENSFHEG00000017824	sf3b3	90	95.282	Fundulus_heteroclitus
ENSMZEG00005026015	sf3b3	99	90.018	ENSGMOG00000008139	sf3b3	89	90.018	Gadus_morhua
ENSMZEG00005026015	sf3b3	99	90.379	ENSGALG00000002531	SF3B3	89	90.379	Gallus_gallus
ENSMZEG00005026015	sf3b3	99	94.912	ENSGAFG00000015206	sf3b3	89	94.912	Gambusia_affinis
ENSMZEG00005026015	sf3b3	99	94.732	ENSGACG00000002646	sf3b3	89	94.732	Gasterosteus_aculeatus
ENSMZEG00005026015	sf3b3	95	89.855	ENSGAGG00000006746	SF3B3	86	89.855	Gopherus_agassizii
ENSMZEG00005026015	sf3b3	99	90.194	ENSGGOG00000003246	SF3B3	89	90.194	Gorilla_gorilla
ENSMZEG00005026015	sf3b3	99	95.611	ENSHBUG00000005960	sf3b3	96	95.611	Haplochromis_burtoni
ENSMZEG00005026015	sf3b3	99	90.194	ENSHGLG00000010135	SF3B3	89	90.194	Heterocephalus_glaber_female
ENSMZEG00005026015	sf3b3	99	87.876	ENSHGLG00100011148	SF3B3	89	87.876	Heterocephalus_glaber_male
ENSMZEG00005026015	sf3b3	99	95.619	ENSHCOG00000011981	sf3b3	96	95.619	Hippocampus_comes
ENSMZEG00005026015	sf3b3	99	94.635	ENSIPUG00000020435	sf3b3	89	94.635	Ictalurus_punctatus
ENSMZEG00005026015	sf3b3	99	90.194	ENSSTOG00000007065	SF3B3	89	90.194	Ictidomys_tridecemlineatus
ENSMZEG00005026015	sf3b3	99	90.194	ENSJJAG00000003948	Sf3b3	89	90.194	Jaculus_jaculus
ENSMZEG00005026015	sf3b3	99	92.599	ENSKMAG00000004066	sf3b3	87	94.879	Kryptolebias_marmoratus
ENSMZEG00005026015	sf3b3	99	95.005	ENSLBEG00000018302	sf3b3	89	95.005	Labrus_bergylta
ENSMZEG00005026015	sf3b3	99	86.961	ENSLACG00000012501	SF3B3	90	86.961	Latimeria_chalumnae
ENSMZEG00005026015	sf3b3	99	93.530	ENSLOCG00000007566	sf3b3	89	93.530	Lepisosteus_oculatus
ENSMZEG00005026015	sf3b3	99	90.287	ENSLAFG00000012219	SF3B3	100	88.324	Loxodonta_africana
ENSMZEG00005026015	sf3b3	99	90.194	ENSMFAG00000045487	SF3B3	89	90.194	Macaca_fascicularis
ENSMZEG00005026015	sf3b3	99	90.194	ENSMMUG00000017812	SF3B3	89	90.194	Macaca_mulatta
ENSMZEG00005026015	sf3b3	99	90.194	ENSMNEG00000033385	SF3B3	89	90.194	Macaca_nemestrina
ENSMZEG00005026015	sf3b3	99	86.216	ENSMLEG00000043891	SF3B3	89	86.216	Mandrillus_leucophaeus
ENSMZEG00005026015	sf3b3	99	95.560	ENSMAMG00000016837	sf3b3	89	95.560	Mastacembelus_armatus
ENSMZEG00005026015	sf3b3	99	100.000	ENSMZEG00005010836	sf3b3	96	100.000	Maylandia_zebra
ENSMZEG00005026015	sf3b3	99	90.379	ENSMGAG00000001597	SF3B3	89	90.379	Meleagris_gallopavo
ENSMZEG00005026015	sf3b3	79	76.705	ENSMAUG00000013618	Sf3b3	83	76.705	Mesocricetus_auratus
ENSMZEG00005026015	sf3b3	99	89.104	ENSMICG00000001363	SF3B3	89	89.104	Microcebus_murinus
ENSMZEG00005026015	sf3b3	99	90.102	ENSMOCG00000006108	Sf3b3	89	90.102	Microtus_ochrogaster
ENSMZEG00005026015	sf3b3	99	98.282	ENSMMOG00000002598	sf3b3	97	98.282	Mola_mola
ENSMZEG00005026015	sf3b3	99	85.767	ENSMODG00000014363	SF3B3	89	85.767	Monodelphis_domestica
ENSMZEG00005026015	sf3b3	99	94.912	ENSMALG00000008014	sf3b3	89	94.912	Monopterus_albus
ENSMZEG00005026015	sf3b3	99	90.194	MGP_CAROLIEiJ_G0031563	Sf3b3	89	90.194	Mus_caroli
ENSMZEG00005026015	sf3b3	99	90.102	ENSMUSG00000033732	Sf3b3	89	90.102	Mus_musculus
ENSMZEG00005026015	sf3b3	99	90.009	MGP_SPRETEiJ_G0032681	Sf3b3	89	90.009	Mus_spretus
ENSMZEG00005026015	sf3b3	99	90.287	ENSMPUG00000010277	SF3B3	89	90.287	Mustela_putorius_furo
ENSMZEG00005026015	sf3b3	99	90.194	ENSMLUG00000014607	SF3B3	89	90.194	Myotis_lucifugus
ENSMZEG00005026015	sf3b3	99	90.194	ENSNGAG00000021903	Sf3b3	89	90.194	Nannospalax_galili
ENSMZEG00005026015	sf3b3	90	93.031	ENSNBRG00000007197	sf3b3	96	93.031	Neolamprologus_brichardi
ENSMZEG00005026015	sf3b3	99	89.084	ENSNLEG00000016127	SF3B3	89	89.084	Nomascus_leucogenys
ENSMZEG00005026015	sf3b3	90	87.869	ENSMEUG00000004479	SF3B3	82	87.869	Notamacropus_eugenii
ENSMZEG00005026015	sf3b3	99	86.586	ENSOPRG00000009847	SF3B3	91	86.586	Ochotona_princeps
ENSMZEG00005026015	sf3b3	99	90.194	ENSODEG00000014154	SF3B3	89	90.194	Octodon_degus
ENSMZEG00005026015	sf3b3	99	96.762	ENSONIG00000011198	sf3b3	89	96.762	Oreochromis_niloticus
ENSMZEG00005026015	sf3b3	99	90.379	ENSOANG00000001161	-	89	90.379	Ornithorhynchus_anatinus
ENSMZEG00005026015	sf3b3	99	87.974	ENSOCUG00000004139	SF3B3	89	87.974	Oryctolagus_cuniculus
ENSMZEG00005026015	sf3b3	99	97.328	ENSORLG00000013472	sf3b3	96	97.328	Oryzias_latipes
ENSMZEG00005026015	sf3b3	99	97.328	ENSORLG00020017473	sf3b3	96	97.328	Oryzias_latipes_hni
ENSMZEG00005026015	sf3b3	99	97.328	ENSORLG00015007710	sf3b3	96	97.328	Oryzias_latipes_hsok
ENSMZEG00005026015	sf3b3	99	94.542	ENSOMEG00000014483	sf3b3	89	94.542	Oryzias_melastigma
ENSMZEG00005026015	sf3b3	99	90.102	ENSOGAG00000016051	SF3B3	89	90.102	Otolemur_garnettii
ENSMZEG00005026015	sf3b3	99	90.037	ENSOARG00000004816	SF3B3	89	90.037	Ovis_aries
ENSMZEG00005026015	sf3b3	99	90.194	ENSPPAG00000026807	SF3B3	89	90.194	Pan_paniscus
ENSMZEG00005026015	sf3b3	99	90.287	ENSPPRG00000001686	SF3B3	89	90.287	Panthera_pardus
ENSMZEG00005026015	sf3b3	99	93.130	ENSPTIG00000020382	SF3B3	99	93.130	Panthera_tigris_altaica
ENSMZEG00005026015	sf3b3	99	90.194	ENSPTRG00000008308	SF3B3	89	90.194	Pan_troglodytes
ENSMZEG00005026015	sf3b3	99	90.194	ENSPANG00000024075	SF3B3	89	90.194	Papio_anubis
ENSMZEG00005026015	sf3b3	99	96.565	ENSPKIG00000002712	sf3b3	96	96.565	Paramormyrops_kingsleyae
ENSMZEG00005026015	sf3b3	99	90.102	ENSPSIG00000002232	SF3B3	99	90.102	Pelodiscus_sinensis
ENSMZEG00005026015	sf3b3	99	90.102	ENSPEMG00000008603	Sf3b3	89	90.102	Peromyscus_maniculatus_bairdii
ENSMZEG00005026015	sf3b3	99	87.974	ENSPMAG00000001793	sf3b3	89	87.974	Petromyzon_marinus
ENSMZEG00005026015	sf3b3	99	90.379	ENSPCIG00000014927	SF3B3	93	90.379	Phascolarctos_cinereus
ENSMZEG00005026015	sf3b3	99	95.190	ENSPFOG00000015516	sf3b3	89	95.190	Poecilia_formosa
ENSMZEG00005026015	sf3b3	99	95.190	ENSPLAG00000014330	sf3b3	89	95.190	Poecilia_latipinna
ENSMZEG00005026015	sf3b3	99	95.282	ENSPMEG00000019856	sf3b3	89	95.282	Poecilia_mexicana
ENSMZEG00005026015	sf3b3	80	98.467	ENSPREG00000019669	sf3b3	84	98.467	Poecilia_reticulata
ENSMZEG00005026015	sf3b3	94	89.679	ENSPPYG00000007539	SF3B3	89	89.679	Pongo_abelii
ENSMZEG00005026015	sf3b3	99	69.935	ENSPCAG00000002623	SF3B3	89	69.935	Procavia_capensis
ENSMZEG00005026015	sf3b3	81	96.296	ENSPCOG00000026582	SF3B3	87	96.296	Propithecus_coquereli
ENSMZEG00005026015	sf3b3	99	90.194	ENSPVAG00000000684	SF3B3	89	90.194	Pteropus_vampyrus
ENSMZEG00005026015	sf3b3	99	99.905	ENSPNYG00000003528	sf3b3	96	99.905	Pundamilia_nyererei
ENSMZEG00005026015	sf3b3	99	94.172	ENSPNAG00000015419	sf3b3	89	94.172	Pygocentrus_nattereri
ENSMZEG00005026015	sf3b3	99	90.102	ENSRNOG00000017724	Sf3b3	89	90.102	Rattus_norvegicus
ENSMZEG00005026015	sf3b3	99	90.194	ENSRBIG00000021904	SF3B3	89	90.194	Rhinopithecus_bieti
ENSMZEG00005026015	sf3b3	99	90.194	ENSRROG00000045703	SF3B3	89	90.194	Rhinopithecus_roxellana
ENSMZEG00005026015	sf3b3	80	41.935	YML049C	-	73	41.935	Saccharomyces_cerevisiae
ENSMZEG00005026015	sf3b3	99	90.194	ENSSBOG00000029156	SF3B3	89	90.194	Saimiri_boliviensis_boliviensis
ENSMZEG00005026015	sf3b3	99	90.379	ENSSHAG00000000372	SF3B3	93	90.379	Sarcophilus_harrisii
ENSMZEG00005026015	sf3b3	99	96.851	ENSSFOG00015012877	sf3b3	96	96.851	Scleropages_formosus
ENSMZEG00005026015	sf3b3	99	94.265	ENSSMAG00000014386	sf3b3	89	94.265	Scophthalmus_maximus
ENSMZEG00005026015	sf3b3	99	95.745	ENSSDUG00000021201	sf3b3	89	95.745	Seriola_dumerili
ENSMZEG00005026015	sf3b3	99	95.745	ENSSLDG00000017532	sf3b3	89	95.745	Seriola_lalandi_dorsalis
ENSMZEG00005026015	sf3b3	92	92.324	ENSSARG00000006917	SF3B3	80	92.324	Sorex_araneus
ENSMZEG00005026015	sf3b3	99	90.009	ENSSPUG00000006253	SF3B3	89	90.009	Sphenodon_punctatus
ENSMZEG00005026015	sf3b3	94	91.431	ENSSPAG00000003125	sf3b3	87	91.431	Stegastes_partitus
ENSMZEG00005026015	sf3b3	99	93.130	ENSSSCG00000025323	SF3B3	96	93.130	Sus_scrofa
ENSMZEG00005026015	sf3b3	99	90.296	ENSTGUG00000006082	SF3B3	89	90.296	Taeniopygia_guttata
ENSMZEG00005026015	sf3b3	57	85.738	ENSTRUG00000015623	sf3b3	96	80.425	Takifugu_rubripes
ENSMZEG00005026015	sf3b3	87	97.189	ENSTNIG00000004857	sf3b3	85	97.189	Tetraodon_nigroviridis
ENSMZEG00005026015	sf3b3	86	78.541	ENSTBEG00000002946	SF3B3	83	78.541	Tupaia_belangeri
ENSMZEG00005026015	sf3b3	99	89.362	ENSTTRG00000005855	SF3B3	89	89.362	Tursiops_truncatus
ENSMZEG00005026015	sf3b3	99	90.287	ENSUAMG00000006780	SF3B3	89	90.287	Ursus_americanus
ENSMZEG00005026015	sf3b3	99	90.287	ENSUMAG00000017757	SF3B3	89	90.287	Ursus_maritimus
ENSMZEG00005026015	sf3b3	94	77.410	ENSVPAG00000003202	SF3B3	84	77.410	Vicugna_pacos
ENSMZEG00005026015	sf3b3	99	90.287	ENSVVUG00000017922	SF3B3	89	90.287	Vulpes_vulpes
ENSMZEG00005026015	sf3b3	99	90.564	ENSXETG00000032869	SF3B3	89	90.564	Xenopus_tropicalis
ENSMZEG00005026015	sf3b3	76	98.635	ENSXCOG00000013628	sf3b3	83	98.635	Xiphophorus_couchianus
ENSMZEG00005026015	sf3b3	99	95.097	ENSXMAG00000006334	sf3b3	89	95.097	Xiphophorus_maculatus