EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026036 (Gene tree)
Gene ID: 101481619
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 32194 bases
Position: chrLG20:19159928-19192121
Accession: 101481619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005034824	RRM_1	PF00076.22	4.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036064	-	3361	XM_004546215	ENSMZEP00005034824	250 (aa)	XP_004546272	UPI00032A34E4

Gene Model

Click here to download ENSMZEG00005026036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026036	rbm38	91	57.082	ENSG00000132819	RBM38	94	81.197	Homo_sapiens
ENSMZEG00005026036	rbm38	100	94.400	ENSAPOG00000003301	rbm38	100	94.400	Acanthochromis_polyacanthus
ENSMZEG00005026036	rbm38	98	64.286	ENSAPOG00000009939	-	100	64.706	Acanthochromis_polyacanthus
ENSMZEG00005026036	rbm38	100	95.600	ENSACIG00000000010	rbm38	100	95.600	Amphilophus_citrinellus
ENSMZEG00005026036	rbm38	98	63.241	ENSACIG00000012502	-	100	83.761	Amphilophus_citrinellus
ENSMZEG00005026036	rbm38	95	64.583	ENSAOCG00000012559	RBM38	98	65.021	Amphiprion_ocellaris
ENSMZEG00005026036	rbm38	100	94.400	ENSAOCG00000013497	-	100	94.400	Amphiprion_ocellaris
ENSMZEG00005026036	rbm38	100	94.400	ENSAPEG00000013137	rbm38	100	94.400	Amphiprion_percula
ENSMZEG00005026036	rbm38	98	63.492	ENSAPEG00000023581	-	100	63.922	Amphiprion_percula
ENSMZEG00005026036	rbm38	98	64.683	ENSATEG00000016710	-	100	65.098	Anabas_testudineus
ENSMZEG00005026036	rbm38	100	88.800	ENSATEG00000016366	rbm38	100	88.800	Anabas_testudineus
ENSMZEG00005026036	rbm38	93	55.462	ENSACAG00000016238	RBM38	90	55.462	Anolis_carolinensis
ENSMZEG00005026036	rbm38	93	57.143	ENSANAG00000031959	RBM38	81	84.848	Aotus_nancymaae
ENSMZEG00005026036	rbm38	98	64.143	ENSACLG00000019514	-	100	64.143	Astatotilapia_calliptera
ENSMZEG00005026036	rbm38	98	61.200	ENSAMXG00000015601	-	100	61.200	Astyanax_mexicanus
ENSMZEG00005026036	rbm38	95	55.882	ENSAMXG00000038120	rbm38	96	55.882	Astyanax_mexicanus
ENSMZEG00005026036	rbm38	91	58.369	ENSBTAG00000008105	RBM38	89	58.369	Bos_taurus
ENSMZEG00005026036	rbm38	58	59.310	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSMZEG00005026036	rbm38	91	56.652	ENSCJAG00000019139	RBM38	81	84.848	Callithrix_jacchus
ENSMZEG00005026036	rbm38	93	57.563	ENSCAFG00020021943	RBM38	90	57.563	Canis_lupus_dingo
ENSMZEG00005026036	rbm38	91	56.652	ENSCHIG00000002609	RBM38	89	56.652	Capra_hircus
ENSMZEG00005026036	rbm38	91	58.369	ENSCPOG00000012781	RBM38	89	58.369	Cavia_porcellus
ENSMZEG00005026036	rbm38	91	56.652	ENSCCAG00000036872	RBM38	81	84.848	Cebus_capucinus
ENSMZEG00005026036	rbm38	91	58.369	ENSCATG00000032133	RBM38	81	84.848	Cercocebus_atys
ENSMZEG00005026036	rbm38	93	57.563	ENSCLAG00000005906	RBM38	94	57.563	Chinchilla_lanigera
ENSMZEG00005026036	rbm38	91	58.369	ENSCSAG00000015503	RBM38	89	58.369	Chlorocebus_sabaeus
ENSMZEG00005026036	rbm38	93	59.244	ENSCPBG00000024059	RBM38	100	59.244	Chrysemys_picta_bellii
ENSMZEG00005026036	rbm38	60	61.783	ENSCING00000025102	-	66	61.783	Ciona_intestinalis
ENSMZEG00005026036	rbm38	61	58.861	ENSCSAVG00000001132	-	58	58.861	Ciona_savignyi
ENSMZEG00005026036	rbm38	94	45.148	ENSCANG00000030105	-	80	45.148	Colobus_angolensis_palliatus
ENSMZEG00005026036	rbm38	72	64.481	ENSCGRG00001012928	Rbm38	89	57.940	Cricetulus_griseus_chok1gshd
ENSMZEG00005026036	rbm38	84	67.464	ENSCSEG00000020943	rbm38	68	67.464	Cynoglossus_semilaevis
ENSMZEG00005026036	rbm38	98	64.940	ENSCSEG00000004701	-	100	64.286	Cynoglossus_semilaevis
ENSMZEG00005026036	rbm38	100	84.000	ENSCVAG00000015952	rbm38	100	84.000	Cyprinodon_variegatus
ENSMZEG00005026036	rbm38	98	63.492	ENSCVAG00000005472	-	100	63.922	Cyprinodon_variegatus
ENSMZEG00005026036	rbm38	98	63.563	ENSDARG00000058818	rbm38	100	63.563	Danio_rerio
ENSMZEG00005026036	rbm38	93	56.780	ENSDNOG00000032004	RBM38	100	56.780	Dasypus_novemcinctus
ENSMZEG00005026036	rbm38	91	57.082	ENSECAG00000007700	RBM38	89	57.082	Equus_caballus
ENSMZEG00005026036	rbm38	91	56.410	ENSEEUG00000013489	RBM38	89	57.265	Erinaceus_europaeus
ENSMZEG00005026036	rbm38	92	72.609	ENSELUG00000000585	-	100	72.609	Esox_lucius
ENSMZEG00005026036	rbm38	98	63.922	ENSELUG00000005849	-	100	63.922	Esox_lucius
ENSMZEG00005026036	rbm38	74	63.830	ENSFCAG00000042916	RBM38	81	83.838	Felis_catus
ENSMZEG00005026036	rbm38	70	68.362	ENSFALG00000010805	RBM38	90	67.614	Ficedula_albicollis
ENSMZEG00005026036	rbm38	100	85.259	ENSFHEG00000017748	rbm38	100	85.259	Fundulus_heteroclitus
ENSMZEG00005026036	rbm38	98	61.328	ENSFHEG00000006160	-	100	61.328	Fundulus_heteroclitus
ENSMZEG00005026036	rbm38	75	67.539	ENSGMOG00000016655	-	99	70.526	Gadus_morhua
ENSMZEG00005026036	rbm38	93	56.723	ENSGALG00000026081	RBM38	100	56.723	Gallus_gallus
ENSMZEG00005026036	rbm38	93	79.399	ENSGACG00000015224	rbm38	100	79.399	Gasterosteus_aculeatus
ENSMZEG00005026036	rbm38	93	61.765	ENSGACG00000009873	-	100	61.765	Gasterosteus_aculeatus
ENSMZEG00005026036	rbm38	93	60.084	ENSGAGG00000001187	RBM38	100	60.084	Gopherus_agassizii
ENSMZEG00005026036	rbm38	100	100.000	ENSHBUG00000012058	rbm38	100	100.000	Haplochromis_burtoni
ENSMZEG00005026036	rbm38	98	64.143	ENSHBUG00000011778	-	100	64.143	Haplochromis_burtoni
ENSMZEG00005026036	rbm38	93	57.143	ENSHGLG00000015077	RBM38	90	57.143	Heterocephalus_glaber_female
ENSMZEG00005026036	rbm38	100	62.151	ENSHCOG00000019040	rbm38	100	62.151	Hippocampus_comes
ENSMZEG00005026036	rbm38	84	66.509	ENSHCOG00000005622	-	59	67.453	Hippocampus_comes
ENSMZEG00005026036	rbm38	98	60.400	ENSIPUG00000019349	-	100	60.400	Ictalurus_punctatus
ENSMZEG00005026036	rbm38	91	74.468	ENSKMAG00000012402	rbm38	99	74.468	Kryptolebias_marmoratus
ENSMZEG00005026036	rbm38	98	62.151	ENSLBEG00000016163	RBM38	100	63.137	Labrus_bergylta
ENSMZEG00005026036	rbm38	100	88.800	ENSLBEG00000018878	rbm38	100	88.800	Labrus_bergylta
ENSMZEG00005026036	rbm38	98	65.323	ENSLOCG00000003456	rbm38	100	65.323	Lepisosteus_oculatus
ENSMZEG00005026036	rbm38	91	58.369	ENSMFAG00000043808	RBM38	81	84.848	Macaca_fascicularis
ENSMZEG00005026036	rbm38	91	58.369	ENSMMUG00000031391	RBM38	81	84.848	Macaca_mulatta
ENSMZEG00005026036	rbm38	91	58.369	ENSMNEG00000034683	RBM38	81	84.848	Macaca_nemestrina
ENSMZEG00005026036	rbm38	98	66.135	ENSMAMG00000020499	RBM38	100	66.535	Mastacembelus_armatus
ENSMZEG00005026036	rbm38	100	91.200	ENSMAMG00000024135	rbm38	100	91.200	Mastacembelus_armatus
ENSMZEG00005026036	rbm38	98	64.143	ENSMZEG00005000849	-	100	64.143	Maylandia_zebra
ENSMZEG00005026036	rbm38	72	65.027	ENSMAUG00000021211	Rbm38	89	58.798	Mesocricetus_auratus
ENSMZEG00005026036	rbm38	93	57.143	ENSMICG00000038011	RBM38	100	57.143	Microcebus_murinus
ENSMZEG00005026036	rbm38	72	65.027	ENSMOCG00000008715	Rbm38	89	58.798	Microtus_ochrogaster
ENSMZEG00005026036	rbm38	98	63.492	ENSMMOG00000020051	-	100	63.922	Mola_mola
ENSMZEG00005026036	rbm38	95	55.785	ENSMODG00000016458	RBM38	94	56.198	Monodelphis_domestica
ENSMZEG00005026036	rbm38	100	74.000	ENSMALG00000022327	rbm38	100	74.800	Monopterus_albus
ENSMZEG00005026036	rbm38	75	73.158	ENSMALG00000004680	RBM38	89	64.017	Monopterus_albus
ENSMZEG00005026036	rbm38	91	57.082	MGP_CAROLIEiJ_G0024745	Rbm38	89	57.082	Mus_caroli
ENSMZEG00005026036	rbm38	91	57.082	ENSMUSG00000027510	Rbm38	89	57.082	Mus_musculus
ENSMZEG00005026036	rbm38	91	57.082	MGP_PahariEiJ_G0026186	Rbm38	89	57.082	Mus_pahari
ENSMZEG00005026036	rbm38	91	57.082	MGP_SPRETEiJ_G0025665	Rbm38	89	57.082	Mus_spretus
ENSMZEG00005026036	rbm38	74	64.362	ENSMPUG00000006518	RBM38	91	64.362	Mustela_putorius_furo
ENSMZEG00005026036	rbm38	91	57.511	ENSMLUG00000011140	RBM38	98	57.511	Myotis_lucifugus
ENSMZEG00005026036	rbm38	98	64.143	ENSNBRG00000022545	-	100	64.143	Neolamprologus_brichardi
ENSMZEG00005026036	rbm38	100	99.200	ENSNBRG00000022685	rbm38	100	99.200	Neolamprologus_brichardi
ENSMZEG00005026036	rbm38	91	58.369	ENSODEG00000007980	RBM38	89	58.369	Octodon_degus
ENSMZEG00005026036	rbm38	98	64.000	ENSONIG00000020324	-	100	64.000	Oreochromis_niloticus
ENSMZEG00005026036	rbm38	98	99.592	ENSONIG00000017073	rbm38	100	99.592	Oreochromis_niloticus
ENSMZEG00005026036	rbm38	78	62.437	ENSOANG00000009259	RBM38	74	62.755	Ornithorhynchus_anatinus
ENSMZEG00005026036	rbm38	100	82.072	ENSORLG00000012154	rbm38	100	82.072	Oryzias_latipes
ENSMZEG00005026036	rbm38	98	61.811	ENSORLG00000027180	-	100	62.646	Oryzias_latipes
ENSMZEG00005026036	rbm38	100	61.240	ENSORLG00020020751	-	100	62.646	Oryzias_latipes_hni
ENSMZEG00005026036	rbm38	100	82.072	ENSORLG00020017871	rbm38	100	82.072	Oryzias_latipes_hni
ENSMZEG00005026036	rbm38	98	62.055	ENSORLG00015017040	-	100	63.241	Oryzias_latipes_hsok
ENSMZEG00005026036	rbm38	100	82.072	ENSORLG00015012606	rbm38	100	82.072	Oryzias_latipes_hsok
ENSMZEG00005026036	rbm38	100	81.275	ENSOMEG00000006805	rbm38	100	81.275	Oryzias_melastigma
ENSMZEG00005026036	rbm38	98	63.095	ENSOMEG00000023912	-	100	63.889	Oryzias_melastigma
ENSMZEG00005026036	rbm38	95	56.612	ENSOGAG00000029136	RBM38	92	56.612	Otolemur_garnettii
ENSMZEG00005026036	rbm38	74	63.830	ENSPPRG00000009507	RBM38	81	83.838	Panthera_pardus
ENSMZEG00005026036	rbm38	78	62.944	ENSPTRG00000013661	RBM38	81	84.848	Pan_troglodytes
ENSMZEG00005026036	rbm38	58	71.724	ENSPTRG00000045845	-	77	71.724	Pan_troglodytes
ENSMZEG00005026036	rbm38	95	45.679	ENSPANG00000033127	-	93	45.679	Papio_anubis
ENSMZEG00005026036	rbm38	91	58.369	ENSPANG00000020919	-	81	84.848	Papio_anubis
ENSMZEG00005026036	rbm38	98	60.714	ENSPKIG00000025417	rbm38	100	63.281	Paramormyrops_kingsleyae
ENSMZEG00005026036	rbm38	98	58.800	ENSPKIG00000018122	-	100	80.342	Paramormyrops_kingsleyae
ENSMZEG00005026036	rbm38	93	59.244	ENSPSIG00000011649	RBM38	92	59.244	Pelodiscus_sinensis
ENSMZEG00005026036	rbm38	98	60.236	ENSPMGG00000017094	-	100	60.630	Periophthalmus_magnuspinnatus
ENSMZEG00005026036	rbm38	100	78.088	ENSPMGG00000011343	rbm38	100	80.478	Periophthalmus_magnuspinnatus
ENSMZEG00005026036	rbm38	95	57.025	ENSPCIG00000013648	RBM38	94	57.025	Phascolarctos_cinereus
ENSMZEG00005026036	rbm38	100	85.827	ENSPFOG00000011658	rbm38	100	85.827	Poecilia_formosa
ENSMZEG00005026036	rbm38	98	62.891	ENSPLAG00000002500	-	100	64.143	Poecilia_latipinna
ENSMZEG00005026036	rbm38	100	85.433	ENSPLAG00000005218	rbm38	100	85.433	Poecilia_latipinna
ENSMZEG00005026036	rbm38	100	86.220	ENSPMEG00000015770	rbm38	100	86.220	Poecilia_mexicana
ENSMZEG00005026036	rbm38	100	85.433	ENSPREG00000007398	rbm38	100	85.433	Poecilia_reticulata
ENSMZEG00005026036	rbm38	95	56.790	ENSPCOG00000026201	RBM38	84	81.731	Propithecus_coquereli
ENSMZEG00005026036	rbm38	75	40.314	ENSPVAG00000006457	RBM38	92	39.004	Pteropus_vampyrus
ENSMZEG00005026036	rbm38	98	64.143	ENSPNYG00000019727	-	100	83.761	Pundamilia_nyererei
ENSMZEG00005026036	rbm38	100	99.600	ENSPNYG00000021373	rbm38	100	99.600	Pundamilia_nyererei
ENSMZEG00005026036	rbm38	98	62.000	ENSPNAG00000015123	-	91	81.356	Pygocentrus_nattereri
ENSMZEG00005026036	rbm38	95	60.669	ENSPNAG00000010596	rbm38	96	60.669	Pygocentrus_nattereri
ENSMZEG00005026036	rbm38	91	58.798	ENSRNOG00000006420	Rbm38	89	58.798	Rattus_norvegicus
ENSMZEG00005026036	rbm38	93	50.213	ENSRROG00000036388	-	89	50.213	Rhinopithecus_roxellana
ENSMZEG00005026036	rbm38	93	56.303	ENSSBOG00000031053	RBM38	92	84.848	Saimiri_boliviensis_boliviensis
ENSMZEG00005026036	rbm38	98	56.800	ENSSFOG00015004453	rbm38	100	60.800	Scleropages_formosus
ENSMZEG00005026036	rbm38	100	93.600	ENSSDUG00000022611	rbm38	100	93.600	Seriola_dumerili
ENSMZEG00005026036	rbm38	98	64.683	ENSSDUG00000021082	RBM38	100	65.490	Seriola_dumerili
ENSMZEG00005026036	rbm38	100	93.600	ENSSLDG00000010845	rbm38	100	93.600	Seriola_lalandi_dorsalis
ENSMZEG00005026036	rbm38	98	64.683	ENSSLDG00000011778	RBM38	100	65.490	Seriola_lalandi_dorsalis
ENSMZEG00005026036	rbm38	98	64.683	ENSSPAG00000020989	RBM38	100	64.706	Stegastes_partitus
ENSMZEG00005026036	rbm38	100	94.800	ENSSPAG00000011113	rbm38	100	94.800	Stegastes_partitus
ENSMZEG00005026036	rbm38	91	57.940	ENSSSCG00000007504	RBM38	89	57.940	Sus_scrofa
ENSMZEG00005026036	rbm38	100	83.200	ENSTRUG00000024954	rbm38	100	84.000	Takifugu_rubripes
ENSMZEG00005026036	rbm38	98	62.302	ENSTRUG00000019869	-	100	61.905	Takifugu_rubripes
ENSMZEG00005026036	rbm38	93	63.445	ENSTNIG00000007093	-	100	63.445	Tetraodon_nigroviridis
ENSMZEG00005026036	rbm38	74	63.830	ENSUAMG00000019780	RBM38	90	57.143	Ursus_americanus
ENSMZEG00005026036	rbm38	93	57.563	ENSVVUG00000017246	RBM38	90	57.563	Vulpes_vulpes
ENSMZEG00005026036	rbm38	77	63.077	ENSXETG00000011268	rbm38	99	56.846	Xenopus_tropicalis
ENSMZEG00005026036	rbm38	52	75.000	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSMZEG00005026036	rbm38	100	87.600	ENSXMAG00000023662	rbm38	100	87.600	Xiphophorus_maculatus