EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026268 (Gene tree)
Gene ID: 101472794
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase ddx6
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 11153 bases
Position: chrLG22:8358217-8369369
Accession: 101472794
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035144	DEAD	PF00270.29	2.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036390	-	6423	XM_004569211	ENSMZEP00005035144	487 (aa)	XP_004569268	UPI00032A1403

Gene Model

Click here to download ENSMZEG00005026268's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026268	-	98	87.657	ENSAPOG00000014829	ddx61	98	87.657	Acanthochromis_polyacanthus
ENSMZEG00005026268	-	77	97.067	ENSAPOG00000023627	-	95	97.067	Acanthochromis_polyacanthus
ENSMZEG00005026268	-	100	91.992	ENSACIG00000018355	-	100	91.992	Amphilophus_citrinellus
ENSMZEG00005026268	-	98	88.703	ENSAOCG00000007627	ddx61	98	88.703	Amphiprion_ocellaris
ENSMZEG00005026268	-	100	96.524	ENSAOCG00000006269	-	100	96.524	Amphiprion_ocellaris
ENSMZEG00005026268	-	98	88.703	ENSAPEG00000007293	ddx61	98	88.703	Amphiprion_percula
ENSMZEG00005026268	-	100	96.524	ENSAPEG00000020642	-	100	96.524	Amphiprion_percula
ENSMZEG00005026268	-	100	96.524	ENSAPEG00000021368	-	100	96.524	Amphiprion_percula
ENSMZEG00005026268	-	97	87.738	ENSATEG00000011302	ddx61	99	87.288	Anabas_testudineus
ENSMZEG00005026268	-	100	95.910	ENSATEG00000005424	-	100	95.910	Anabas_testudineus
ENSMZEG00005026268	-	99	87.552	ENSACLG00000027620	ddx61	99	87.552	Astatotilapia_calliptera
ENSMZEG00005026268	-	100	100.000	ENSACLG00000003260	-	100	100.000	Astatotilapia_calliptera
ENSMZEG00005026268	-	97	87.815	ENSAMXG00000032542	ddx61	99	86.680	Astyanax_mexicanus
ENSMZEG00005026268	-	99	88.454	ENSAMXG00000033980	-	98	88.454	Astyanax_mexicanus
ENSMZEG00005026268	-	100	94.274	ENSCSEG00000009893	-	100	94.274	Cynoglossus_semilaevis
ENSMZEG00005026268	-	100	92.638	ENSCVAG00000011006	-	100	92.638	Cyprinodon_variegatus
ENSMZEG00005026268	-	97	87.076	ENSDARG00000018425	ddx61	98	87.076	Danio_rerio
ENSMZEG00005026268	-	99	89.004	ENSELUG00000020545	ddx61	99	89.004	Esox_lucius
ENSMZEG00005026268	-	99	89.775	ENSELUG00000022538	-	99	89.775	Esox_lucius
ENSMZEG00005026268	-	100	93.252	ENSFHEG00000015487	-	100	93.252	Fundulus_heteroclitus
ENSMZEG00005026268	-	66	87.462	ENSGMOG00000003561	-	100	88.146	Gadus_morhua
ENSMZEG00005026268	-	97	87.841	ENSGMOG00000013762	ddx61	99	87.526	Gadus_morhua
ENSMZEG00005026268	-	100	92.449	ENSGAFG00000015865	-	100	92.449	Gambusia_affinis
ENSMZEG00005026268	-	99	86.420	ENSGACG00000003401	ddx61	100	86.420	Gasterosteus_aculeatus
ENSMZEG00005026268	-	99	94.813	ENSGACG00000002413	-	99	94.813	Gasterosteus_aculeatus
ENSMZEG00005026268	-	100	100.000	ENSHBUG00000017033	-	100	100.000	Haplochromis_burtoni
ENSMZEG00005026268	-	99	87.759	ENSHBUG00000017832	ddx61	99	87.759	Haplochromis_burtoni
ENSMZEG00005026268	-	97	85.169	ENSHCOG00000008184	ddx61	97	85.169	Hippocampus_comes
ENSMZEG00005026268	-	100	90.593	ENSHCOG00000012238	-	100	90.593	Hippocampus_comes
ENSMZEG00005026268	-	97	89.641	ENSIPUG00000008367	-	98	89.263	Ictalurus_punctatus
ENSMZEG00005026268	-	96	86.325	ENSIPUG00000012823	DDX6	99	85.031	Ictalurus_punctatus
ENSMZEG00005026268	-	100	95.483	ENSKMAG00000007213	-	100	95.483	Kryptolebias_marmoratus
ENSMZEG00005026268	-	100	93.750	ENSLBEG00000016890	-	100	93.750	Labrus_bergylta
ENSMZEG00005026268	-	97	88.397	ENSLBEG00000001740	ddx61	98	88.397	Labrus_bergylta
ENSMZEG00005026268	-	98	84.232	ENSLACG00000015214	ddx61	100	84.232	Latimeria_chalumnae
ENSMZEG00005026268	-	96	49.682	ENSLOCG00000004352	ddx61	94	48.832	Lepisosteus_oculatus
ENSMZEG00005026268	-	100	95.918	ENSMAMG00000005559	-	100	95.918	Mastacembelus_armatus
ENSMZEG00005026268	-	99	87.010	ENSMAMG00000005321	ddx61	99	87.010	Mastacembelus_armatus
ENSMZEG00005026268	-	99	87.759	ENSMZEG00005003556	ddx61	99	87.759	Maylandia_zebra
ENSMZEG00005026268	-	96	86.994	ENSMMOG00000007415	ddx61	97	86.994	Mola_mola
ENSMZEG00005026268	-	72	77.054	ENSMMOG00000008825	-	92	77.054	Mola_mola
ENSMZEG00005026268	-	100	85.481	ENSMMOG00000013694	-	100	85.481	Mola_mola
ENSMZEG00005026268	-	97	76.618	ENSMALG00000013776	ddx61	96	76.618	Monopterus_albus
ENSMZEG00005026268	-	100	94.070	ENSMALG00000013817	-	100	94.070	Monopterus_albus
ENSMZEG00005026268	-	100	92.608	ENSNBRG00000015075	-	100	92.608	Neolamprologus_brichardi
ENSMZEG00005026268	-	98	80.962	ENSNBRG00000015800	ddx61	99	80.962	Neolamprologus_brichardi
ENSMZEG00005026268	-	100	99.795	ENSONIG00000013748	-	100	99.795	Oreochromis_niloticus
ENSMZEG00005026268	-	98	87.866	ENSONIG00000011418	ddx61	99	87.866	Oreochromis_niloticus
ENSMZEG00005026268	-	100	93.224	ENSORLG00000009178	-	100	93.224	Oryzias_latipes
ENSMZEG00005026268	-	100	93.429	ENSORLG00020015515	-	100	93.429	Oryzias_latipes_hni
ENSMZEG00005026268	-	100	93.224	ENSORLG00015006764	-	100	93.224	Oryzias_latipes_hsok
ENSMZEG00005026268	-	97	86.017	ENSOMEG00000022326	-	99	86.017	Oryzias_melastigma
ENSMZEG00005026268	-	97	90.546	ENSPKIG00000024264	ddx61	98	90.021	Paramormyrops_kingsleyae
ENSMZEG00005026268	-	100	83.607	ENSPMGG00000013355	-	100	83.607	Periophthalmus_magnuspinnatus
ENSMZEG00005026268	-	100	92.886	ENSPFOG00000005750	-	100	92.886	Poecilia_formosa
ENSMZEG00005026268	-	100	92.886	ENSPLAG00000000403	-	100	92.886	Poecilia_latipinna
ENSMZEG00005026268	-	100	93.033	ENSPMEG00000023737	-	100	93.033	Poecilia_mexicana
ENSMZEG00005026268	-	100	100.000	ENSPNYG00000003986	-	100	100.000	Pundamilia_nyererei
ENSMZEG00005026268	-	99	81.503	ENSPNYG00000015045	ddx61	99	81.503	Pundamilia_nyererei
ENSMZEG00005026268	-	98	87.083	ENSPNAG00000024072	ddx61	99	87.083	Pygocentrus_nattereri
ENSMZEG00005026268	-	99	90.083	ENSPNAG00000008742	-	98	90.083	Pygocentrus_nattereri
ENSMZEG00005026268	-	97	89.451	ENSSFOG00015021404	ddx61	97	88.773	Scleropages_formosus
ENSMZEG00005026268	-	96	88.486	ENSSMAG00000006591	ddx61	97	87.789	Scophthalmus_maximus
ENSMZEG00005026268	-	100	94.479	ENSSMAG00000001793	-	100	94.479	Scophthalmus_maximus
ENSMZEG00005026268	-	96	89.126	ENSSDUG00000009713	ddx61	99	86.680	Seriola_dumerili
ENSMZEG00005026268	-	100	96.531	ENSSDUG00000007530	-	100	96.531	Seriola_dumerili
ENSMZEG00005026268	-	96	89.126	ENSSLDG00000000132	ddx61	99	86.680	Seriola_lalandi_dorsalis
ENSMZEG00005026268	-	100	96.531	ENSSLDG00000007608	-	100	96.531	Seriola_lalandi_dorsalis
ENSMZEG00005026268	-	96	90.171	ENSSPAG00000001578	ddx61	99	88.017	Stegastes_partitus
ENSMZEG00005026268	-	100	97.137	ENSSPAG00000013878	-	100	97.137	Stegastes_partitus
ENSMZEG00005026268	-	99	90.369	ENSTRUG00000012432	-	99	90.369	Takifugu_rubripes
ENSMZEG00005026268	-	99	91.250	ENSTNIG00000003560	-	100	91.250	Tetraodon_nigroviridis
ENSMZEG00005026268	-	100	82.857	ENSXCOG00000001406	-	100	82.857	Xiphophorus_couchianus
ENSMZEG00005026268	-	100	92.857	ENSXMAG00000016090	-	100	92.857	Xiphophorus_maculatus