EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026322 (Gene tree)
Gene ID: 101465054
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6252 bases
Position: chrLG20:21143755-21150006
Accession: 101465054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035219	Exo_endo_phos	PF03372.23	1.4e-14	1	1
ENSMZEP00005035217	Exo_endo_phos	PF03372.23	1.6e-14	1	1
ENSMZEP00005035216	Exo_endo_phos	PF03372.23	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036466	-	1584	-	ENSMZEP00005035219	527 (aa)	-	-
ENSMZET00005036464	-	2061	XM_004546347	ENSMZEP00005035217	561 (aa)	XP_004546404	UPI000D312629
ENSMZET00005036463	-	1918	-	ENSMZEP00005035216	539 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005026322's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026322's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026322	apex2	99	45.556	ENSG00000169188	APEX2	99	46.555	Homo_sapiens
ENSMZEG00005026322	apex2	100	77.504	ENSAPOG00000005805	apex2	100	77.504	Acanthochromis_polyacanthus
ENSMZEG00005026322	apex2	99	46.125	ENSAMEG00000003608	APEX2	99	46.125	Ailuropoda_melanoleuca
ENSMZEG00005026322	apex2	100	89.165	ENSACIG00000010000	apex2	100	89.165	Amphilophus_citrinellus
ENSMZEG00005026322	apex2	100	77.504	ENSAOCG00000021774	apex2	100	77.504	Amphiprion_ocellaris
ENSMZEG00005026322	apex2	100	77.329	ENSAPEG00000020890	apex2	94	77.329	Amphiprion_percula
ENSMZEG00005026322	apex2	100	74.126	ENSATEG00000023600	apex2	100	74.126	Anabas_testudineus
ENSMZEG00005026322	apex2	99	49.077	ENSACAG00000011201	APEX2	99	49.446	Anolis_carolinensis
ENSMZEG00005026322	apex2	97	40.755	ENSANAG00000020845	-	99	41.321	Aotus_nancymaae
ENSMZEG00005026322	apex2	99	45.841	ENSANAG00000021907	-	99	46.409	Aotus_nancymaae
ENSMZEG00005026322	apex2	100	63.899	ENSAMXG00000007422	apex2	100	63.899	Astyanax_mexicanus
ENSMZEG00005026322	apex2	99	47.495	ENSBTAG00000013177	APEX2	99	46.239	Bos_taurus
ENSMZEG00005026322	apex2	99	45.488	ENSCJAG00000016584	APEX2	99	46.069	Callithrix_jacchus
ENSMZEG00005026322	apex2	99	45.321	ENSCAFG00000014310	APEX2	99	45.321	Canis_familiaris
ENSMZEG00005026322	apex2	99	46.239	ENSCAFG00020013818	APEX2	94	57.965	Canis_lupus_dingo
ENSMZEG00005026322	apex2	99	47.681	ENSCHIG00000019916	APEX2	99	48.237	Capra_hircus
ENSMZEG00005026322	apex2	99	45.971	ENSTSYG00000005612	APEX2	99	45.971	Carlito_syrichta
ENSMZEG00005026322	apex2	99	46.140	ENSCPOG00000007265	APEX2	99	46.140	Cavia_porcellus
ENSMZEG00005026322	apex2	96	42.012	ENSCCAG00000025405	-	96	42.012	Cebus_capucinus
ENSMZEG00005026322	apex2	99	46.182	ENSCATG00000044854	APEX2	99	46.182	Cercocebus_atys
ENSMZEG00005026322	apex2	99	47.026	ENSCLAG00000017315	APEX2	99	47.026	Chinchilla_lanigera
ENSMZEG00005026322	apex2	99	45.810	ENSCSAG00000012124	APEX2	99	46.369	Chlorocebus_sabaeus
ENSMZEG00005026322	apex2	100	47.269	ENSCPBG00000016631	APEX2	99	47.398	Chrysemys_picta_bellii
ENSMZEG00005026322	apex2	99	44.278	ENSCSAVG00000006052	-	100	43.797	Ciona_savignyi
ENSMZEG00005026322	apex2	99	46.369	ENSCANG00000003053	APEX2	99	46.369	Colobus_angolensis_palliatus
ENSMZEG00005026322	apex2	99	46.642	ENSCGRG00001008132	Apex2	99	46.642	Cricetulus_griseus_chok1gshd
ENSMZEG00005026322	apex2	99	46.642	ENSCGRG00000009667	Apex2	86	61.611	Cricetulus_griseus_crigri
ENSMZEG00005026322	apex2	100	68.467	ENSCSEG00000019900	apex2	99	68.118	Cynoglossus_semilaevis
ENSMZEG00005026322	apex2	100	73.252	ENSCVAG00000021583	apex2	100	73.252	Cyprinodon_variegatus
ENSMZEG00005026322	apex2	100	62.143	ENSDARG00000008472	apex2	100	61.649	Danio_rerio
ENSMZEG00005026322	apex2	99	45.956	ENSDNOG00000038901	APEX2	99	45.956	Dasypus_novemcinctus
ENSMZEG00005026322	apex2	99	45.880	ENSEBUG00000015654	apex2	100	45.880	Eptatretus_burgeri
ENSMZEG00005026322	apex2	99	45.656	ENSEASG00005011694	APEX2	90	45.287	Equus_asinus_asinus
ENSMZEG00005026322	apex2	99	45.656	ENSECAG00000026921	APEX2	90	45.287	Equus_caballus
ENSMZEG00005026322	apex2	99	46.691	ENSEEUG00000013172	APEX2	99	47.681	Erinaceus_europaeus
ENSMZEG00005026322	apex2	100	62.823	ENSELUG00000021417	apex2	99	62.264	Esox_lucius
ENSMZEG00005026322	apex2	99	46.580	ENSFCAG00000021990	APEX2	99	45.588	Felis_catus
ENSMZEG00005026322	apex2	99	45.887	ENSFDAG00000008076	APEX2	90	61.792	Fukomys_damarensis
ENSMZEG00005026322	apex2	100	66.365	ENSFHEG00000021411	apex2	99	66.546	Fundulus_heteroclitus
ENSMZEG00005026322	apex2	67	75.806	ENSGMOG00000019681	apex2	100	75.806	Gadus_morhua
ENSMZEG00005026322	apex2	100	70.455	ENSGAFG00000005829	apex2	100	70.629	Gambusia_affinis
ENSMZEG00005026322	apex2	65	84.571	ENSGACG00000012307	apex2	91	84.571	Gasterosteus_aculeatus
ENSMZEG00005026322	apex2	94	44.055	ENSGAGG00000011520	APEX2	88	45.455	Gopherus_agassizii
ENSMZEG00005026322	apex2	99	46.182	ENSGGOG00000002056	APEX2	99	46.555	Gorilla_gorilla
ENSMZEG00005026322	apex2	100	99.643	ENSHBUG00000009938	apex2	100	99.643	Haplochromis_burtoni
ENSMZEG00005026322	apex2	99	46.468	ENSHGLG00000000273	APEX2	99	56.466	Heterocephalus_glaber_female
ENSMZEG00005026322	apex2	100	68.991	ENSHCOG00000010165	apex2	100	68.991	Hippocampus_comes
ENSMZEG00005026322	apex2	100	60.374	ENSIPUG00000000352	APEX2	100	60.034	Ictalurus_punctatus
ENSMZEG00005026322	apex2	99	46.211	ENSSTOG00000025121	APEX2	85	62.019	Ictidomys_tridecemlineatus
ENSMZEG00005026322	apex2	99	48.045	ENSJJAG00000019611	Apex2	93	61.215	Jaculus_jaculus
ENSMZEG00005026322	apex2	100	73.322	ENSKMAG00000006985	apex2	100	73.145	Kryptolebias_marmoratus
ENSMZEG00005026322	apex2	100	73.647	ENSLBEG00000012139	apex2	100	73.124	Labrus_bergylta
ENSMZEG00005026322	apex2	100	52.844	ENSLACG00000000865	APEX2	100	52.477	Latimeria_chalumnae
ENSMZEG00005026322	apex2	100	58.947	ENSLOCG00000014467	apex2	100	58.524	Lepisosteus_oculatus
ENSMZEG00005026322	apex2	99	45.505	ENSLAFG00000018312	APEX2	99	44.587	Loxodonta_africana
ENSMZEG00005026322	apex2	99	46.555	ENSMFAG00000002486	APEX2	99	46.555	Macaca_fascicularis
ENSMZEG00005026322	apex2	99	46.555	ENSMMUG00000008428	APEX2	99	46.555	Macaca_mulatta
ENSMZEG00005026322	apex2	99	46.555	ENSMNEG00000036783	APEX2	99	46.555	Macaca_nemestrina
ENSMZEG00005026322	apex2	99	46.182	ENSMLEG00000028208	APEX2	99	46.182	Mandrillus_leucophaeus
ENSMZEG00005026322	apex2	100	74.742	ENSMAMG00000024220	apex2	100	74.742	Mastacembelus_armatus
ENSMZEG00005026322	apex2	99	45.455	ENSMICG00000043181	APEX2	99	45.640	Microcebus_murinus
ENSMZEG00005026322	apex2	99	46.961	ENSMOCG00000004339	Apex2	88	61.137	Microtus_ochrogaster
ENSMZEG00005026322	apex2	100	70.884	ENSMMOG00000017340	apex2	100	71.231	Mola_mola
ENSMZEG00005026322	apex2	99	52.552	ENSMODG00000005341	APEX2	99	52.363	Monodelphis_domestica
ENSMZEG00005026322	apex2	100	73.242	ENSMALG00000014179	apex2	100	73.242	Monopterus_albus
ENSMZEG00005026322	apex2	99	46.972	MGP_CAROLIEiJ_G0033484	Apex2	100	53.405	Mus_caroli
ENSMZEG00005026322	apex2	99	46.972	ENSMUSG00000025269	Apex2	99	53.405	Mus_musculus
ENSMZEG00005026322	apex2	99	47.339	MGP_PahariEiJ_G0032023	Apex2	93	62.085	Mus_pahari
ENSMZEG00005026322	apex2	99	46.972	MGP_SPRETEiJ_G0034654	Apex2	100	53.405	Mus_spretus
ENSMZEG00005026322	apex2	99	45.290	ENSMPUG00000003293	APEX2	99	45.290	Mustela_putorius_furo
ENSMZEG00005026322	apex2	99	46.765	ENSMLUG00000004562	-	99	46.765	Myotis_lucifugus
ENSMZEG00005026322	apex2	99	47.842	ENSMLUG00000016298	-	99	47.092	Myotis_lucifugus
ENSMZEG00005026322	apex2	99	45.438	ENSNGAG00000013576	Apex2	99	45.985	Nannospalax_galili
ENSMZEG00005026322	apex2	100	97.513	ENSNBRG00000010099	apex2	100	97.513	Neolamprologus_brichardi
ENSMZEG00005026322	apex2	62	54.511	ENSNLEG00000032067	-	79	54.511	Nomascus_leucogenys
ENSMZEG00005026322	apex2	100	94.671	ENSONIG00000016881	apex2	100	94.671	Oreochromis_niloticus
ENSMZEG00005026322	apex2	96	53.551	ENSOANG00000000689	-	96	55.200	Ornithorhynchus_anatinus
ENSMZEG00005026322	apex2	77	65.031	ENSOCUG00000000570	APEX2	82	59.906	Oryctolagus_cuniculus
ENSMZEG00005026322	apex2	100	72.056	ENSORLG00000014053	apex2	100	71.880	Oryzias_latipes
ENSMZEG00005026322	apex2	100	71.880	ENSORLG00020013253	apex2	100	71.880	Oryzias_latipes_hni
ENSMZEG00005026322	apex2	100	72.056	ENSORLG00015007515	apex2	100	71.880	Oryzias_latipes_hsok
ENSMZEG00005026322	apex2	100	72.518	ENSOMEG00000003655	apex2	100	72.340	Oryzias_melastigma
ENSMZEG00005026322	apex2	99	47.037	ENSOGAG00000007797	APEX2	99	47.037	Otolemur_garnettii
ENSMZEG00005026322	apex2	99	47.681	ENSOARG00000005742	APEX2	99	48.237	Ovis_aries
ENSMZEG00005026322	apex2	99	46.396	ENSPPAG00000035747	APEX2	99	46.111	Pan_paniscus
ENSMZEG00005026322	apex2	99	46.765	ENSPPRG00000002440	APEX2	99	45.772	Panthera_pardus
ENSMZEG00005026322	apex2	99	46.211	ENSPTIG00000021651	APEX2	99	45.221	Panthera_tigris_altaica
ENSMZEG00005026322	apex2	99	46.396	ENSPTRG00000021946	APEX2	99	46.111	Pan_troglodytes
ENSMZEG00005026322	apex2	99	46.182	ENSPANG00000003595	APEX2	99	46.182	Papio_anubis
ENSMZEG00005026322	apex2	100	62.963	ENSPKIG00000007752	apex2	100	63.139	Paramormyrops_kingsleyae
ENSMZEG00005026322	apex2	100	69.634	ENSPMGG00000009151	apex2	100	69.231	Periophthalmus_magnuspinnatus
ENSMZEG00005026322	apex2	99	46.337	ENSPEMG00000016475	Apex2	89	59.633	Peromyscus_maniculatus_bairdii
ENSMZEG00005026322	apex2	99	51.796	ENSPCIG00000007633	APEX2	98	52.174	Phascolarctos_cinereus
ENSMZEG00005026322	apex2	100	70.455	ENSPFOG00000000408	apex2	100	71.329	Poecilia_formosa
ENSMZEG00005026322	apex2	100	70.280	ENSPLAG00000023814	apex2	100	70.804	Poecilia_latipinna
ENSMZEG00005026322	apex2	100	70.629	ENSPMEG00000023222	apex2	100	71.503	Poecilia_mexicana
ENSMZEG00005026322	apex2	99	44.346	ENSPPYG00000020388	APEX2	99	44.211	Pongo_abelii
ENSMZEG00005026322	apex2	99	47.761	ENSPCOG00000016083	APEX2	99	47.761	Propithecus_coquereli
ENSMZEG00005026322	apex2	96	43.893	ENSPVAG00000007851	APEX2	99	44.919	Pteropus_vampyrus
ENSMZEG00005026322	apex2	100	99.465	ENSPNYG00000015698	apex2	100	99.465	Pundamilia_nyererei
ENSMZEG00005026322	apex2	100	61.591	ENSPNAG00000011666	apex2	100	61.670	Pygocentrus_nattereri
ENSMZEG00005026322	apex2	99	47.320	ENSRNOG00000000166	Apex2	99	46.350	Rattus_norvegicus
ENSMZEG00005026322	apex2	99	45.996	ENSRBIG00000036500	APEX2	99	46.369	Rhinopithecus_bieti
ENSMZEG00005026322	apex2	99	45.996	ENSRROG00000032674	APEX2	99	46.369	Rhinopithecus_roxellana
ENSMZEG00005026322	apex2	89	31.579	YBL019W	APN2	83	31.579	Saccharomyces_cerevisiae
ENSMZEG00005026322	apex2	96	37.945	ENSSBOG00000003489	-	96	37.352	Saimiri_boliviensis_boliviensis
ENSMZEG00005026322	apex2	99	45.704	ENSSBOG00000030500	-	99	45.971	Saimiri_boliviensis_boliviensis
ENSMZEG00005026322	apex2	99	52.290	ENSSHAG00000007846	APEX2	99	51.908	Sarcophilus_harrisii
ENSMZEG00005026322	apex2	92	86.154	ENSSFOG00015010354	apex2	84	82.857	Scleropages_formosus
ENSMZEG00005026322	apex2	100	69.217	ENSSMAG00000012753	apex2	100	69.043	Scophthalmus_maximus
ENSMZEG00005026322	apex2	100	77.530	ENSSDUG00000022892	apex2	100	77.015	Seriola_dumerili
ENSMZEG00005026322	apex2	100	80.529	ENSSLDG00000024347	apex2	100	80.529	Seriola_lalandi_dorsalis
ENSMZEG00005026322	apex2	99	47.310	ENSSARG00000010297	APEX2	99	47.124	Sorex_araneus
ENSMZEG00005026322	apex2	100	79.438	ENSSPAG00000016279	apex2	100	79.438	Stegastes_partitus
ENSMZEG00005026322	apex2	99	47.963	ENSSSCG00000012348	-	99	47.778	Sus_scrofa
ENSMZEG00005026322	apex2	100	71.250	ENSTRUG00000015660	apex2	100	71.250	Takifugu_rubripes
ENSMZEG00005026322	apex2	88	66.458	ENSTNIG00000003725	apex2	99	69.469	Tetraodon_nigroviridis
ENSMZEG00005026322	apex2	96	44.981	ENSTBEG00000010520	APEX2	99	46.843	Tupaia_belangeri
ENSMZEG00005026322	apex2	99	46.310	ENSUAMG00000004720	APEX2	94	58.407	Ursus_americanus
ENSMZEG00005026322	apex2	99	43.486	ENSUMAG00000002892	APEX2	99	43.970	Ursus_maritimus
ENSMZEG00005026322	apex2	99	46.097	ENSVVUG00000005989	APEX2	99	46.097	Vulpes_vulpes
ENSMZEG00005026322	apex2	99	52.158	ENSXETG00000022026	apex2	99	52.158	Xenopus_tropicalis
ENSMZEG00005026322	apex2	100	69.930	ENSXMAG00000025740	apex2	100	70.629	Xiphophorus_maculatus