EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005026397 (Gene tree)
Gene ID
101478099
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Plus strand
Length
9404 bases
Position
chrLG20:21707852-21717255
Accession
101478099
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005035321YTHPF04146.157.3e-4111
ENSMZEP00005035319YTHPF04146.158.2e-4111
ENSMZEP00005035318YTHPF04146.158.2e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005036569-3257-ENSMZEP00005035321567 (aa)-UPI0003AF2D91
ENSMZET00005036567-1716-ENSMZEP00005035319571 (aa)--
ENSMZET00005036566-3727XM_004546398ENSMZEP00005035318608 (aa)XP_004546455UPI00032A3DF5
Gene Model
Click here to download ENSMZEG00005026397's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026397's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005026397ythdf19873.002ENSG00000149658YTHDF19672.581Homo_sapiens
ENSMZEG00005026397ythdf110094.839ENSAPOG00000004358ythdf110094.839Acanthochromis_polyacanthus
ENSMZEG00005026397ythdf19976.777ENSAPOG00000010796YTHDF19780.071Acanthochromis_polyacanthus
ENSMZEG00005026397ythdf19572.294ENSAMEG00000017323YTHDF19373.752Ailuropoda_melanoleuca
ENSMZEG00005026397ythdf19788.496ENSACIG00000011264ythdf19689.204Amphilophus_citrinellus
ENSMZEG00005026397ythdf19778.445ENSACIG00000020083YTHDF19679.049Amphilophus_citrinellus
ENSMZEG00005026397ythdf110094.669ENSAOCG00000022251ythdf110094.669Amphiprion_ocellaris
ENSMZEG00005026397ythdf19977.409ENSAOCG00000012567YTHDF19977.600Amphiprion_ocellaris
ENSMZEG00005026397ythdf19977.567ENSAPEG00000008750YTHDF19977.760Amphiprion_percula
ENSMZEG00005026397ythdf110094.669ENSAPEG00000021878ythdf110094.669Amphiprion_percula
ENSMZEG00005026397ythdf110093.182ENSATEG00000023840ythdf110092.857Anabas_testudineus
ENSMZEG00005026397ythdf19779.115ENSATEG00000005996YTHDF19977.476Anabas_testudineus
ENSMZEG00005026397ythdf19573.406ENSAPLG00000005985YTHDF19474.492Anas_platyrhynchos
ENSMZEG00005026397ythdf19873.322ENSACAG00000005560YTHDF19673.050Anolis_carolinensis
ENSMZEG00005026397ythdf19960.946ENSANAG00000021022-9661.002Aotus_nancymaae
ENSMZEG00005026397ythdf19872.566ENSANAG00000034786-9672.941Aotus_nancymaae
ENSMZEG00005026397ythdf19977.389ENSACLG00000025518YTHDF19978.045Astatotilapia_calliptera
ENSMZEG00005026397ythdf19770.515ENSBTAG00000010383YTHDF19671.457Bos_taurus
ENSMZEG00005026397ythdf19872.469ENSCJAG00000010056YTHDF19672.222Callithrix_jacchus
ENSMZEG00005026397ythdf19072.374ENSCAFG00000012772YTHDF19673.031Canis_familiaris
ENSMZEG00005026397ythdf19072.374ENSCAFG00020001214YTHDF19673.031Canis_lupus_dingo
ENSMZEG00005026397ythdf19770.179ENSCHIG00000026494YTHDF19670.968Capra_hircus
ENSMZEG00005026397ythdf19572.894ENSTSYG00000033436YTHDF19473.616Carlito_syrichta
ENSMZEG00005026397ythdf19872.064ENSCAPG00000002544YTHDF19172.101Cavia_aperea
ENSMZEG00005026397ythdf19871.454ENSCPOG00000010202YTHDF19671.758Cavia_porcellus
ENSMZEG00005026397ythdf19971.503ENSCCAG00000024650YTHDF19672.272Cebus_capucinus
ENSMZEG00005026397ythdf19872.163ENSCATG00000033272YTHDF19672.939Cercocebus_atys
ENSMZEG00005026397ythdf19872.954ENSCLAG00000005989YTHDF19573.665Chinchilla_lanigera
ENSMZEG00005026397ythdf19872.163ENSCSAG00000016266YTHDF19672.939Chlorocebus_sabaeus
ENSMZEG00005026397ythdf19873.158ENSCPBG00000027183YTHDF19672.954Chrysemys_picta_bellii
ENSMZEG00005026397ythdf19573.126ENSCANG00000029082YTHDF19373.937Colobus_angolensis_palliatus
ENSMZEG00005026397ythdf19973.730ENSCGRG00001016568Ythdf19673.036Cricetulus_griseus_chok1gshd
ENSMZEG00005026397ythdf19574.542ENSCGRG00000009207Ythdf19574.033Cricetulus_griseus_crigri
ENSMZEG00005026397ythdf19785.996ENSCSEG00000020623YTHDF19786.535Cynoglossus_semilaevis
ENSMZEG00005026397ythdf19878.435ENSCVAG00000014378YTHDF19978.170Cyprinodon_variegatus
ENSMZEG00005026397ythdf110088.331ENSCVAG00000017940ythdf110088.006Cyprinodon_variegatus
ENSMZEG00005026397ythdf19983.442ENSDARG00000016447ythdf19982.468Danio_rerio
ENSMZEG00005026397ythdf19872.872ENSDNOG00000043590YTHDF19673.166Dasypus_novemcinctus
ENSMZEG00005026397ythdf19670.856ENSDORG00000002879Ythdf19171.245Dipodomys_ordii
ENSMZEG00005026397ythdf19455.405ENSETEG00000017860-9555.405Echinops_telfairi
ENSMZEG00005026397ythdf19973.171ENSEASG00005023186YTHDF19672.939Equus_asinus_asinus
ENSMZEG00005026397ythdf19973.509ENSECAG00000019475YTHDF19673.425Equus_caballus
ENSMZEG00005026397ythdf19172.937ENSEEUG00000007461YTHDF19672.904Erinaceus_europaeus
ENSMZEG00005026397ythdf19972.043ENSELUG00000001906YTHDF19676.894Esox_lucius
ENSMZEG00005026397ythdf19884.574ENSELUG00000022768ythdf19985.993Esox_lucius
ENSMZEG00005026397ythdf19771.377ENSFCAG00000008917YTHDF19672.581Felis_catus
ENSMZEG00005026397ythdf19872.982ENSFALG00000010463YTHDF19672.776Ficedula_albicollis
ENSMZEG00005026397ythdf19772.744ENSFDAG00000019602YTHDF19671.758Fukomys_damarensis
ENSMZEG00005026397ythdf110089.935ENSFHEG00000023218ythdf110089.123Fundulus_heteroclitus
ENSMZEG00005026397ythdf19977.707ENSFHEG00000002540YTHDF19977.157Fundulus_heteroclitus
ENSMZEG00005026397ythdf15686.510ENSGMOG00000019610ythdf15586.510Gadus_morhua
ENSMZEG00005026397ythdf19872.261ENSGALG00000005745YTHDF19673.622Gallus_gallus
ENSMZEG00005026397ythdf19977.409ENSGAFG00000021100YTHDF19977.316Gambusia_affinis
ENSMZEG00005026397ythdf19977.211ENSGACG00000002613YTHDF19777.431Gasterosteus_aculeatus
ENSMZEG00005026397ythdf19991.626ENSGACG00000012014ythdf19991.133Gasterosteus_aculeatus
ENSMZEG00005026397ythdf19873.333ENSGAGG00000003007YTHDF19673.310Gopherus_agassizii
ENSMZEG00005026397ythdf19774.327ENSGGOG00000008340YTHDF19672.581Gorilla_gorilla
ENSMZEG00005026397ythdf19976.911ENSHBUG00000004875YTHDF19977.564Haplochromis_burtoni
ENSMZEG00005026397ythdf199100.000ENSHBUG00000011284ythdf197100.000Haplochromis_burtoni
ENSMZEG00005026397ythdf19872.389ENSHGLG00000006585YTHDF19672.451Heterocephalus_glaber_female
ENSMZEG00005026397ythdf19872.389ENSHGLG00100004683YTHDF19672.451Heterocephalus_glaber_male
ENSMZEG00005026397ythdf19975.159ENSHCOG00000011303YTHDF19975.923Hippocampus_comes
ENSMZEG00005026397ythdf19787.479ENSHCOG00000008866ythdf19787.223Hippocampus_comes
ENSMZEG00005026397ythdf19978.675ENSIPUG00000000425Ythdf19978.686Ictalurus_punctatus
ENSMZEG00005026397ythdf19572.894ENSSTOG00000023001YTHDF19573.529Ictidomys_tridecemlineatus
ENSMZEG00005026397ythdf19873.050ENSJJAG00000013589Ythdf19573.985Jaculus_jaculus
ENSMZEG00005026397ythdf19977.831ENSKMAG00000017472YTHDF19977.368Kryptolebias_marmoratus
ENSMZEG00005026397ythdf110090.375ENSKMAG00000005595ythdf110089.886Kryptolebias_marmoratus
ENSMZEG00005026397ythdf110089.935ENSLBEG00000014105ythdf110091.883Labrus_bergylta
ENSMZEG00005026397ythdf19977.033ENSLBEG00000012068YTHDF19976.997Labrus_bergylta
ENSMZEG00005026397ythdf19774.595ENSLACG00000014195YTHDF19574.170Latimeria_chalumnae
ENSMZEG00005026397ythdf19976.923ENSLOCG00000005020ythdf19974.309Lepisosteus_oculatus
ENSMZEG00005026397ythdf19872.954ENSLAFG00000008884YTHDF19672.760Loxodonta_africana
ENSMZEG00005026397ythdf19872.163ENSMFAG00000042868YTHDF19672.939Macaca_fascicularis
ENSMZEG00005026397ythdf19873.393ENSMMUG00000009227YTHDF19672.939Macaca_mulatta
ENSMZEG00005026397ythdf19872.163ENSMNEG00000030851YTHDF19672.939Macaca_nemestrina
ENSMZEG00005026397ythdf19773.514ENSMLEG00000009252YTHDF19574.122Mandrillus_leucophaeus
ENSMZEG00005026397ythdf110090.554ENSMAMG00000024255ythdf110091.368Mastacembelus_armatus
ENSMZEG00005026397ythdf19778.799ENSMAMG00000011072YTHDF19977.476Mastacembelus_armatus
ENSMZEG00005026397ythdf19976.911ENSMZEG00005023596YTHDF19977.564Maylandia_zebra
ENSMZEG00005026397ythdf19573.224ENSMGAG00000006139YTHDF19374.307Meleagris_gallopavo
ENSMZEG00005026397ythdf19974.291ENSMAUG00000017660Ythdf19773.551Mesocricetus_auratus
ENSMZEG00005026397ythdf19871.936ENSMICG00000032266YTHDF19672.043Microcebus_murinus
ENSMZEG00005026397ythdf19873.535ENSMOCG00000013573Ythdf19673.036Microtus_ochrogaster
ENSMZEG00005026397ythdf19977.295ENSMMOG00000020467YTHDF19976.329Mola_mola
ENSMZEG00005026397ythdf19786.838ENSMMOG00000017500ythdf19586.509Mola_mola
ENSMZEG00005026397ythdf19273.194ENSMODG00000016842YTHDF19674.409Monodelphis_domestica
ENSMZEG00005026397ythdf110091.115ENSMALG00000015672ythdf110090.953Monopterus_albus
ENSMZEG00005026397ythdf19778.445ENSMALG00000022209YTHDF19976.651Monopterus_albus
ENSMZEG00005026397ythdf19873.274MGP_CAROLIEiJ_G0024790Ythdf19672.857Mus_caroli
ENSMZEG00005026397ythdf19873.274ENSMUSG00000038848Ythdf19672.857Mus_musculus
ENSMZEG00005026397ythdf19873.274MGP_PahariEiJ_G0026237Ythdf19672.857Mus_pahari
ENSMZEG00005026397ythdf19873.274MGP_SPRETEiJ_G0025715Ythdf19672.857Mus_spretus
ENSMZEG00005026397ythdf19267.366ENSMPUG00000008111YTHDF19670.923Mustela_putorius_furo
ENSMZEG00005026397ythdf19772.906ENSMLUG00000002241YTHDF19573.007Myotis_lucifugus
ENSMZEG00005026397ythdf19873.936ENSNGAG00000000334Ythdf19673.393Nannospalax_galili
ENSMZEG00005026397ythdf19778.622ENSNBRG00000015321YTHDF19777.815Neolamprologus_brichardi
ENSMZEG00005026397ythdf19799.157ENSNBRG00000008213ythdf19899.157Neolamprologus_brichardi
ENSMZEG00005026397ythdf19567.459ENSOPRG00000001758-9867.844Ochotona_princeps
ENSMZEG00005026397ythdf19758.875ENSODEG00000000074-9559.325Octodon_degus
ENSMZEG00005026397ythdf19872.420ENSODEG00000004380-9672.093Octodon_degus
ENSMZEG00005026397ythdf19899.286ENSONIG00000016799ythdf19999.286Oreochromis_niloticus
ENSMZEG00005026397ythdf19874.645ENSOANG00000003723YTHDF19673.835Ornithorhynchus_anatinus
ENSMZEG00005026397ythdf19977.010ENSORLG00000009739YTHDF19977.221Oryzias_latipes
ENSMZEG00005026397ythdf110089.577ENSORLG00000014665YTHDF110088.762Oryzias_latipes
ENSMZEG00005026397ythdf19976.973ENSORLG00020001332YTHDF19977.597Oryzias_latipes_hni
ENSMZEG00005026397ythdf110090.049ENSORLG00020000307ythdf110089.723Oryzias_latipes_hni
ENSMZEG00005026397ythdf19976.688ENSORLG00015018321YTHDF19976.898Oryzias_latipes_hsok
ENSMZEG00005026397ythdf110089.886ENSORLG00015006302ythdf110089.560Oryzias_latipes_hsok
ENSMZEG00005026397ythdf110091.489ENSOMEG00000002941YTHDF110090.998Oryzias_melastigma
ENSMZEG00005026397ythdf19978.045ENSOMEG00000011843YTHDF19977.060Oryzias_melastigma
ENSMZEG00005026397ythdf19870.547ENSOGAG00000000480YTHDF19671.758Otolemur_garnettii
ENSMZEG00005026397ythdf19569.742ENSOARG00000011639YTHDF19369.358Ovis_aries
ENSMZEG00005026397ythdf19774.327ENSPPAG00000023277YTHDF19573.752Pan_paniscus
ENSMZEG00005026397ythdf19771.864ENSPPRG00000020805YTHDF19672.939Panthera_pardus
ENSMZEG00005026397ythdf18181.081ENSPTIG00000017355YTHDF19279.730Panthera_tigris_altaica
ENSMZEG00005026397ythdf19774.327ENSPTRG00000013730YTHDF19672.581Pan_troglodytes
ENSMZEG00005026397ythdf19872.163ENSPANG00000021472YTHDF19672.939Papio_anubis
ENSMZEG00005026397ythdf19972.077ENSPKIG00000005427ythdf19672.566Paramormyrops_kingsleyae
ENSMZEG00005026397ythdf110073.038ENSPKIG00000005026YTHDF19673.415Paramormyrops_kingsleyae
ENSMZEG00005026397ythdf19775.812ENSPSIG00000005529YTHDF19374.861Pelodiscus_sinensis
ENSMZEG00005026397ythdf19578.497ENSPMGG00000009101YTHDF19779.086Periophthalmus_magnuspinnatus
ENSMZEG00005026397ythdf19587.120ENSPMGG00000015328ythdf19687.324Periophthalmus_magnuspinnatus
ENSMZEG00005026397ythdf19774.549ENSPEMG00000020199Ythdf19673.849Peromyscus_maniculatus_bairdii
ENSMZEG00005026397ythdf110074.221ENSPCIG00000017170YTHDF19674.409Phascolarctos_cinereus
ENSMZEG00005026397ythdf110090.196ENSPFOG00000005405ythdf110089.869Poecilia_formosa
ENSMZEG00005026397ythdf19976.899ENSPLAG00000006298YTHDF19977.316Poecilia_latipinna
ENSMZEG00005026397ythdf110090.196ENSPLAG00000006653ythdf110089.869Poecilia_latipinna
ENSMZEG00005026397ythdf110089.233ENSPMEG00000023753ythdf110089.396Poecilia_mexicana
ENSMZEG00005026397ythdf19976.899ENSPMEG00000020969-9977.316Poecilia_mexicana
ENSMZEG00005026397ythdf110090.196ENSPREG00000002173ythdf110089.869Poecilia_reticulata
ENSMZEG00005026397ythdf19876.990ENSPREG00000017662YTHDF19877.446Poecilia_reticulata
ENSMZEG00005026397ythdf18392.265ENSPPYG00000011226YTHDF19592.655Pongo_abelii
ENSMZEG00005026397ythdf19369.508ENSPCAG00000002452YTHDF19870.874Procavia_capensis
ENSMZEG00005026397ythdf19872.291ENSPCOG00000025969YTHDF19672.581Propithecus_coquereli
ENSMZEG00005026397ythdf19768.412ENSPVAG00000017568YTHDF19767.652Pteropus_vampyrus
ENSMZEG00005026397ythdf1100100.000ENSPNYG00000014007ythdf1100100.000Pundamilia_nyererei
ENSMZEG00005026397ythdf19976.911ENSPNYG00000002266YTHDF19977.564Pundamilia_nyererei
ENSMZEG00005026397ythdf19984.365ENSPNAG00000012447ythdf19983.713Pygocentrus_nattereri
ENSMZEG00005026397ythdf19873.582ENSRNOG00000027015Ythdf19673.036Rattus_norvegicus
ENSMZEG00005026397ythdf19871.277ENSRBIG00000044959YTHDF19672.043Rhinopithecus_bieti
ENSMZEG00005026397ythdf19871.277ENSRROG00000033014YTHDF19672.043Rhinopithecus_roxellana
ENSMZEG00005026397ythdf19672.080ENSSBOG00000027278YTHDF19671.260Saimiri_boliviensis_boliviensis
ENSMZEG00005026397ythdf19874.327ENSSHAG00000010430YTHDF18574.141Sarcophilus_harrisii
ENSMZEG00005026397ythdf19977.083ENSSFOG00015000284ythdf19975.856Scleropages_formosus
ENSMZEG00005026397ythdf19978.559ENSSMAG00000007635YTHDF19776.961Scophthalmus_maximus
ENSMZEG00005026397ythdf17497.452ENSSMAG00000013715ythdf19391.698Scophthalmus_maximus
ENSMZEG00005026397ythdf19579.928ENSSDUG00000015823YTHDF19975.701Seriola_dumerili
ENSMZEG00005026397ythdf110094.023ENSSDUG00000000435ythdf110093.700Seriola_dumerili
ENSMZEG00005026397ythdf19976.295ENSSLDG00000001054YTHDF19976.415Seriola_lalandi_dorsalis
ENSMZEG00005026397ythdf19994.643ENSSLDG00000024948ythdf19994.643Seriola_lalandi_dorsalis
ENSMZEG00005026397ythdf19073.879ENSSPUG00000015143YTHDF19673.228Sphenodon_punctatus
ENSMZEG00005026397ythdf110093.910ENSSPAG00000014989ythdf110093.910Stegastes_partitus
ENSMZEG00005026397ythdf19976.935ENSSPAG00000003666YTHDF19976.997Stegastes_partitus
ENSMZEG00005026397ythdf19871.277ENSSSCG00000040086YTHDF19671.071Sus_scrofa
ENSMZEG00005026397ythdf19573.406ENSTGUG00000007565YTHDF19574.307Taeniopygia_guttata
ENSMZEG00005026397ythdf19591.938ENSTRUG00000004288ythdf19790.051Takifugu_rubripes
ENSMZEG00005026397ythdf19774.958ENSTRUG00000005049YTHDF19776.549Takifugu_rubripes
ENSMZEG00005026397ythdf19776.064ENSTNIG00000003975YTHDF19675.714Tetraodon_nigroviridis
ENSMZEG00005026397ythdf19783.363ENSTNIG00000012490ythdf19683.540Tetraodon_nigroviridis
ENSMZEG00005026397ythdf19971.053ENSTTRG00000001804YTHDF19771.505Tursiops_truncatus
ENSMZEG00005026397ythdf19671.920ENSUAMG00000011021YTHDF19673.031Ursus_americanus
ENSMZEG00005026397ythdf19072.125ENSUMAG00000022290YTHDF19672.835Ursus_maritimus
ENSMZEG00005026397ythdf19072.515ENSVVUG00000015275YTHDF19672.835Vulpes_vulpes
ENSMZEG00005026397ythdf19874.081ENSXETG00000027086ythdf19474.909Xenopus_tropicalis
ENSMZEG00005026397ythdf19877.015ENSXCOG00000008115YTHDF19977.265Xiphophorus_couchianus
ENSMZEG00005026397ythdf19889.146ENSXCOG00000002490ythdf19289.214Xiphophorus_couchianus
ENSMZEG00005026397ythdf110090.835ENSXMAG00000008525ythdf110090.507Xiphophorus_maculatus
ENSMZEG00005026397ythdf19977.409ENSXMAG00000015644YTHDF19977.316Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us