EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026415 (Gene tree)
Gene ID: 101469545
Gene Symbol: skiv2l
Alias: fb70b07|wu:fb70b07
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 20569 bases
Position: chrLG22:10688829-10709397
Accession: 101469545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035347	rRNA_proc-arch	PF13234.6	8.3e-31	1	1
ENSMZEP00005035352	rRNA_proc-arch	PF13234.6	3.7e-27	1	1
ENSMZEP00005035352	DEAD	PF00270.29	2.9e-16	1	1
ENSMZEP00005035347	DEAD	PF00270.29	3.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036596	-	4855	XM_004548966	ENSMZEP00005035347	1242 (aa)	XP_004549023	UPI000D32637C
ENSMZET00005036601	-	3573	-	ENSMZEP00005035352	1190 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005026415's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026415's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026415	skiv2l	99	61.526	ENSG00000204351	SKIV2L	99	61.410	Homo_sapiens
ENSMZEG00005026415	skiv2l	100	90.354	ENSAPOG00000008257	skiv2l	100	90.354	Acanthochromis_polyacanthus
ENSMZEG00005026415	skiv2l	99	61.303	ENSAMEG00000002078	SKIV2L	99	61.429	Ailuropoda_melanoleuca
ENSMZEG00005026415	skiv2l	99	92.376	ENSACIG00000016719	skiv2l	100	92.214	Amphilophus_citrinellus
ENSMZEG00005026415	skiv2l	100	91.077	ENSAOCG00000017352	skiv2l	100	91.077	Amphiprion_ocellaris
ENSMZEG00005026415	skiv2l	100	90.836	ENSAPEG00000001055	skiv2l	100	90.836	Amphiprion_percula
ENSMZEG00005026415	skiv2l	100	90.756	ENSATEG00000007601	skiv2l	100	90.836	Anabas_testudineus
ENSMZEG00005026415	skiv2l	100	63.232	ENSACAG00000011746	SKIV2L	99	63.523	Anolis_carolinensis
ENSMZEG00005026415	skiv2l	99	61.866	ENSANAG00000037992	SKIV2L	99	61.727	Aotus_nancymaae
ENSMZEG00005026415	skiv2l	100	99.758	ENSACLG00000006886	skiv2l	100	99.758	Astatotilapia_calliptera
ENSMZEG00005026415	skiv2l	100	82.546	ENSAMXG00000011517	skiv2l	100	82.546	Astyanax_mexicanus
ENSMZEG00005026415	skiv2l	99	61.205	ENSBTAG00000005587	SKIV2L	99	61.252	Bos_taurus
ENSMZEG00005026415	skiv2l	95	41.628	WBGene00008502	skih-2	99	41.318	Caenorhabditis_elegans
ENSMZEG00005026415	skiv2l	99	61.817	ENSCJAG00000002263	SKIV2L	99	61.508	Callithrix_jacchus
ENSMZEG00005026415	skiv2l	99	61.138	ENSCAFG00000000679	SKIV2L	99	61.190	Canis_familiaris
ENSMZEG00005026415	skiv2l	99	61.138	ENSCAFG00020000948	SKIV2L	99	61.190	Canis_lupus_dingo
ENSMZEG00005026415	skiv2l	99	61.526	ENSCHIG00000012897	SKIV2L	99	61.569	Capra_hircus
ENSMZEG00005026415	skiv2l	99	61.303	ENSTSYG00000012133	SKIV2L	99	61.192	Carlito_syrichta
ENSMZEG00005026415	skiv2l	99	61.066	ENSCPOG00000001307	SKIV2L	99	60.956	Cavia_porcellus
ENSMZEG00005026415	skiv2l	99	61.706	ENSCCAG00000026206	SKIV2L	99	61.569	Cebus_capucinus
ENSMZEG00005026415	skiv2l	99	61.464	ENSCATG00000036901	SKIV2L	99	61.270	Cercocebus_atys
ENSMZEG00005026415	skiv2l	99	61.142	ENSCLAG00000007678	SKIV2L	99	61.094	Chinchilla_lanigera
ENSMZEG00005026415	skiv2l	99	61.786	ENSCSAG00000008988	SKIV2L	99	61.508	Chlorocebus_sabaeus
ENSMZEG00005026415	skiv2l	89	60.265	ENSCPBG00000000343	SKIV2L	99	59.227	Chrysemys_picta_bellii
ENSMZEG00005026415	skiv2l	93	51.245	ENSCING00000005576	-	99	51.024	Ciona_intestinalis
ENSMZEG00005026415	skiv2l	99	61.706	ENSCANG00000039709	SKIV2L	100	60.859	Colobus_angolensis_palliatus
ENSMZEG00005026415	skiv2l	99	61.729	ENSCGRG00001008385	Skiv2l	99	61.520	Cricetulus_griseus_chok1gshd
ENSMZEG00005026415	skiv2l	99	86.715	ENSCSEG00000011326	skiv2l	99	86.715	Cynoglossus_semilaevis
ENSMZEG00005026415	skiv2l	100	89.807	ENSCVAG00000003072	skiv2l	100	89.717	Cyprinodon_variegatus
ENSMZEG00005026415	skiv2l	100	83.920	ENSDARG00000062206	skiv2l	100	83.920	Danio_rerio
ENSMZEG00005026415	skiv2l	92	65.508	ENSDNOG00000037590	SKIV2L	99	58.399	Dasypus_novemcinctus
ENSMZEG00005026415	skiv2l	94	46.010	FBgn0039117	tst	97	45.830	Drosophila_melanogaster
ENSMZEG00005026415	skiv2l	69	79.167	ENSETEG00000009522	SKIV2L	68	79.167	Echinops_telfairi
ENSMZEG00005026415	skiv2l	90	55.584	ENSEBUG00000013680	-	98	54.686	Eptatretus_burgeri
ENSMZEG00005026415	skiv2l	93	62.148	ENSEASG00005015534	SKIV2L	100	62.489	Equus_asinus_asinus
ENSMZEG00005026415	skiv2l	93	61.493	ENSECAG00000021823	SKIV2L	95	61.706	Equus_caballus
ENSMZEG00005026415	skiv2l	54	74.409	ENSEEUG00000005049	SKIV2L	57	74.409	Erinaceus_europaeus
ENSMZEG00005026415	skiv2l	100	84.628	ENSELUG00000000181	skiv2l	100	84.468	Esox_lucius
ENSMZEG00005026415	skiv2l	99	61.365	ENSFCAG00000004519	SKIV2L	99	61.508	Felis_catus
ENSMZEG00005026415	skiv2l	99	60.209	ENSFDAG00000009438	SKIV2L	99	60.270	Fukomys_damarensis
ENSMZEG00005026415	skiv2l	100	89.406	ENSFHEG00000008853	skiv2l	100	89.165	Fundulus_heteroclitus
ENSMZEG00005026415	skiv2l	99	81.481	ENSGMOG00000005926	skiv2l	99	81.481	Gadus_morhua
ENSMZEG00005026415	skiv2l	78	57.083	ENSGALG00000035499	SKIV2L	98	57.128	Gallus_gallus
ENSMZEG00005026415	skiv2l	100	90.048	ENSGAFG00000002382	skiv2l	100	90.048	Gambusia_affinis
ENSMZEG00005026415	skiv2l	100	88.649	ENSGACG00000002927	skiv2l	99	88.649	Gasterosteus_aculeatus
ENSMZEG00005026415	skiv2l	99	61.786	ENSGGOG00000002270	SKIV2L	99	61.648	Gorilla_gorilla
ENSMZEG00005026415	skiv2l	100	99.678	ENSHBUG00000000726	skiv2l	100	99.678	Haplochromis_burtoni
ENSMZEG00005026415	skiv2l	99	61.285	ENSHGLG00000016596	SKIV2L	99	61.252	Heterocephalus_glaber_female
ENSMZEG00005026415	skiv2l	99	59.759	ENSHGLG00100014161	SKIV2L	99	59.746	Heterocephalus_glaber_male
ENSMZEG00005026415	skiv2l	98	82.799	ENSHCOG00000007191	skiv2l	100	82.898	Hippocampus_comes
ENSMZEG00005026415	skiv2l	100	81.529	ENSIPUG00000016263	skiv2l	100	82.669	Ictalurus_punctatus
ENSMZEG00005026415	skiv2l	99	61.252	ENSSTOG00000014596	SKIV2L	99	61.569	Ictidomys_tridecemlineatus
ENSMZEG00005026415	skiv2l	56	64.041	ENSLACG00000002986	-	60	64.041	Latimeria_chalumnae
ENSMZEG00005026415	skiv2l	99	61.415	ENSLAFG00000014231	SKIV2L	99	61.234	Loxodonta_africana
ENSMZEG00005026415	skiv2l	99	61.706	ENSMFAG00000034235	SKIV2L	99	61.508	Macaca_fascicularis
ENSMZEG00005026415	skiv2l	99	61.706	ENSMMUG00000000736	SKIV2L	99	61.508	Macaca_mulatta
ENSMZEG00005026415	skiv2l	99	61.706	ENSMNEG00000044474	SKIV2L	99	61.667	Macaca_nemestrina
ENSMZEG00005026415	skiv2l	99	61.464	ENSMLEG00000030512	SKIV2L	99	61.270	Mandrillus_leucophaeus
ENSMZEG00005026415	skiv2l	100	90.289	ENSMAMG00000002927	skiv2l	100	90.289	Mastacembelus_armatus
ENSMZEG00005026415	skiv2l	68	49.356	ENSMGAG00000001320	SKIV2L	95	49.571	Meleagris_gallopavo
ENSMZEG00005026415	skiv2l	99	61.138	ENSMAUG00000018613	Skiv2l	99	60.935	Mesocricetus_auratus
ENSMZEG00005026415	skiv2l	99	61.606	ENSMICG00000046331	SKIV2L	99	61.727	Microcebus_murinus
ENSMZEG00005026415	skiv2l	99	60.193	ENSMOCG00000014240	Skiv2l	99	60.207	Microtus_ochrogaster
ENSMZEG00005026415	skiv2l	99	85.738	ENSMMOG00000014547	skiv2l	99	85.738	Mola_mola
ENSMZEG00005026415	skiv2l	99	61.410	ENSMODG00000015052	SKIV2L	99	62.044	Monodelphis_domestica
ENSMZEG00005026415	skiv2l	99	85.124	ENSMALG00000010535	skiv2l	99	85.124	Monopterus_albus
ENSMZEG00005026415	skiv2l	99	61.966	MGP_CAROLIEiJ_G0021477	Skiv2l	99	61.447	Mus_caroli
ENSMZEG00005026415	skiv2l	99	61.724	ENSMUSG00000040356	Skiv2l	99	61.447	Mus_musculus
ENSMZEG00005026415	skiv2l	99	61.886	MGP_PahariEiJ_G0020472	Skiv2l	99	61.685	Mus_pahari
ENSMZEG00005026415	skiv2l	99	61.563	MGP_SPRETEiJ_G0022382	Skiv2l	99	61.288	Mus_spretus
ENSMZEG00005026415	skiv2l	99	61.026	ENSMPUG00000010567	SKIV2L	99	61.252	Mustela_putorius_furo
ENSMZEG00005026415	skiv2l	99	61.223	ENSMLUG00000000628	SKIV2L	99	61.032	Myotis_lucifugus
ENSMZEG00005026415	skiv2l	99	94.184	ENSNBRG00000018650	skiv2l	99	94.184	Neolamprologus_brichardi
ENSMZEG00005026415	skiv2l	99	61.035	ENSNLEG00000006451	SKIV2L	100	60.863	Nomascus_leucogenys
ENSMZEG00005026415	skiv2l	79	63.717	ENSMEUG00000006072	SKIV2L	78	63.717	Notamacropus_eugenii
ENSMZEG00005026415	skiv2l	99	60.737	ENSOPRG00000003972	SKIV2L	99	60.870	Ochotona_princeps
ENSMZEG00005026415	skiv2l	99	61.142	ENSODEG00000017516	SKIV2L	99	61.032	Octodon_degus
ENSMZEG00005026415	skiv2l	100	98.392	ENSONIG00000013500	skiv2l	100	98.392	Oreochromis_niloticus
ENSMZEG00005026415	skiv2l	99	61.625	ENSOCUG00000007019	SKIV2L	99	61.508	Oryctolagus_cuniculus
ENSMZEG00005026415	skiv2l	100	88.523	ENSORLG00000002021	skiv2l	100	88.604	Oryzias_latipes
ENSMZEG00005026415	skiv2l	100	88.363	ENSORLG00020009462	skiv2l	100	88.443	Oryzias_latipes_hni
ENSMZEG00005026415	skiv2l	100	88.283	ENSORLG00015016750	skiv2l	100	88.363	Oryzias_latipes_hsok
ENSMZEG00005026415	skiv2l	100	88.907	ENSOMEG00000008531	skiv2l	100	88.907	Oryzias_melastigma
ENSMZEG00005026415	skiv2l	99	61.736	ENSOGAG00000009578	SKIV2L	99	61.429	Otolemur_garnettii
ENSMZEG00005026415	skiv2l	99	58.065	ENSOARG00000002411	-	99	58.152	Ovis_aries
ENSMZEG00005026415	skiv2l	99	61.280	ENSPPAG00000040211	SKIV2L	100	61.186	Pan_paniscus
ENSMZEG00005026415	skiv2l	99	61.625	ENSPPRG00000005017	SKIV2L	99	61.587	Panthera_pardus
ENSMZEG00005026415	skiv2l	99	61.223	ENSPTIG00000021656	SKIV2L	99	61.190	Panthera_tigris_altaica
ENSMZEG00005026415	skiv2l	99	61.706	ENSPTRG00000017997	SKIV2L	99	61.569	Pan_troglodytes
ENSMZEG00005026415	skiv2l	99	60.608	ENSPANG00000011501	SKIV2L	100	60.460	Papio_anubis
ENSMZEG00005026415	skiv2l	100	78.918	ENSPKIG00000011876	skiv2l	100	78.918	Paramormyrops_kingsleyae
ENSMZEG00005026415	skiv2l	99	86.925	ENSPMGG00000019707	skiv2l	99	86.925	Periophthalmus_magnuspinnatus
ENSMZEG00005026415	skiv2l	99	61.322	ENSPEMG00000019001	Skiv2l	99	61.288	Peromyscus_maniculatus_bairdii
ENSMZEG00005026415	skiv2l	99	61.520	ENSPCIG00000018792	SKIV2L	99	61.837	Phascolarctos_cinereus
ENSMZEG00005026415	skiv2l	100	89.647	ENSPFOG00000002424	skiv2l	100	89.647	Poecilia_formosa
ENSMZEG00005026415	skiv2l	100	89.486	ENSPLAG00000018304	skiv2l	100	89.486	Poecilia_latipinna
ENSMZEG00005026415	skiv2l	100	89.807	ENSPMEG00000006997	skiv2l	100	89.807	Poecilia_mexicana
ENSMZEG00005026415	skiv2l	99	85.548	ENSPREG00000002277	skiv2l	99	85.406	Poecilia_reticulata
ENSMZEG00005026415	skiv2l	99	61.384	ENSPPYG00000016472	SKIV2L	99	61.252	Pongo_abelii
ENSMZEG00005026415	skiv2l	78	62.745	ENSPCAG00000004178	SKIV2L	77	62.745	Procavia_capensis
ENSMZEG00005026415	skiv2l	99	61.767	ENSPCOG00000010308	SKIV2L	99	61.807	Propithecus_coquereli
ENSMZEG00005026415	skiv2l	99	61.866	ENSPVAG00000005136	SKIV2L	99	61.667	Pteropus_vampyrus
ENSMZEG00005026415	skiv2l	100	92.626	ENSPNYG00000017853	skiv2l	99	97.059	Pundamilia_nyererei
ENSMZEG00005026415	skiv2l	99	84.228	ENSPNAG00000011823	skiv2l	100	83.949	Pygocentrus_nattereri
ENSMZEG00005026415	skiv2l	99	62.208	ENSRNOG00000000421	Skiv2l	99	61.765	Rattus_norvegicus
ENSMZEG00005026415	skiv2l	99	60.432	ENSRBIG00000035485	SKIV2L	99	60.385	Rhinopithecus_bieti
ENSMZEG00005026415	skiv2l	99	61.625	ENSRROG00000036429	SKIV2L	99	61.429	Rhinopithecus_roxellana
ENSMZEG00005026415	skiv2l	93	38.523	YLR398C	-	77	42.456	Saccharomyces_cerevisiae
ENSMZEG00005026415	skiv2l	99	61.847	ENSSBOG00000027920	SKIV2L	99	61.727	Saimiri_boliviensis_boliviensis
ENSMZEG00005026415	skiv2l	99	61.270	ENSSHAG00000008963	SKIV2L	99	60.777	Sarcophilus_harrisii
ENSMZEG00005026415	skiv2l	100	81.579	ENSSFOG00015016930	skiv2l	100	81.405	Scleropages_formosus
ENSMZEG00005026415	skiv2l	100	89.647	ENSSMAG00000020185	skiv2l	100	89.717	Scophthalmus_maximus
ENSMZEG00005026415	skiv2l	100	90.281	ENSSDUG00000019977	skiv2l	100	90.281	Seriola_dumerili
ENSMZEG00005026415	skiv2l	99	84.163	ENSSLDG00000024382	skiv2l	99	84.250	Seriola_lalandi_dorsalis
ENSMZEG00005026415	skiv2l	99	60.139	ENSSPUG00000012945	SKIV2L	99	59.985	Sphenodon_punctatus
ENSMZEG00005026415	skiv2l	95	91.017	ENSSPAG00000012904	skiv2l	99	91.017	Stegastes_partitus
ENSMZEG00005026415	skiv2l	99	61.349	ENSSSCG00000001424	SKIV2L	100	60.528	Sus_scrofa
ENSMZEG00005026415	skiv2l	68	92.045	ENSTRUG00000000966	skiv2l	100	70.583	Takifugu_rubripes
ENSMZEG00005026415	skiv2l	100	85.176	ENSTNIG00000004382	skiv2l	99	85.256	Tetraodon_nigroviridis
ENSMZEG00005026415	skiv2l	93	63.436	ENSTBEG00000003462	SKIV2L	94	63.436	Tupaia_belangeri
ENSMZEG00005026415	skiv2l	99	57.442	ENSTTRG00000005931	SKIV2L	99	57.528	Tursiops_truncatus
ENSMZEG00005026415	skiv2l	99	61.464	ENSUAMG00000024336	SKIV2L	99	61.569	Ursus_americanus
ENSMZEG00005026415	skiv2l	93	62.169	ENSUMAG00000012666	SKIV2L	100	62.425	Ursus_maritimus
ENSMZEG00005026415	skiv2l	99	61.058	ENSVVUG00000022807	SKIV2L	99	61.146	Vulpes_vulpes
ENSMZEG00005026415	skiv2l	99	58.511	ENSXETG00000010932	skiv2l	99	58.274	Xenopus_tropicalis
ENSMZEG00005026415	skiv2l	99	88.245	ENSXCOG00000019517	skiv2l	97	88.245	Xiphophorus_couchianus
ENSMZEG00005026415	skiv2l	100	89.558	ENSXMAG00000014079	skiv2l	100	89.398	Xiphophorus_maculatus