EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026445 (Gene tree)
Gene ID: 101486857
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: transcriptional repressor scratch 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 9307 bases
Position: chrLG20:22161901-22171207
Accession: 101486857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035384	zf-C2H2	PF00096.26	6.6e-26	1	4
ENSMZEP00005035384	zf-C2H2	PF00096.26	6.6e-26	2	4
ENSMZEP00005035384	zf-C2H2	PF00096.26	6.6e-26	3	4
ENSMZEP00005035384	zf-C2H2	PF00096.26	6.6e-26	4	4
ENSMZEP00005035382	zf-C2H2	PF00096.26	1.8e-25	1	4
ENSMZEP00005035382	zf-C2H2	PF00096.26	1.8e-25	2	4
ENSMZEP00005035382	zf-C2H2	PF00096.26	1.8e-25	3	4
ENSMZEP00005035382	zf-C2H2	PF00096.26	1.8e-25	4	4
ENSMZEP00005035384	zf-met	PF12874.7	1.6e-10	1	1
ENSMZEP00005035382	zf-met	PF12874.7	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036635	-	828	-	ENSMZEP00005035384	275 (aa)	-	-
ENSMZET00005036633	-	5970	XM_004546433	ENSMZEP00005035382	319 (aa)	XP_004546490	UPI0003298FB6

Gene Model

Click here to download ENSMZEG00005026445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026445	scrt2	96	64.664	ENSAPOG00000015197	-	97	64.664	Acanthochromis_polyacanthus
ENSMZEG00005026445	scrt2	96	69.565	ENSAPOG00000009279	scrt1b	96	69.565	Acanthochromis_polyacanthus
ENSMZEG00005026445	scrt2	100	98.433	ENSAPOG00000003680	scrt2	100	98.433	Acanthochromis_polyacanthus
ENSMZEG00005026445	scrt2	100	96.751	ENSACIG00000012604	scrt2	100	96.751	Amphilophus_citrinellus
ENSMZEG00005026445	scrt2	96	68.841	ENSACIG00000013613	scrt1b	96	68.841	Amphilophus_citrinellus
ENSMZEG00005026445	scrt2	100	62.654	ENSACIG00000001296	-	100	63.385	Amphilophus_citrinellus
ENSMZEG00005026445	scrt2	96	63.448	ENSACIG00000006586	-	97	63.448	Amphilophus_citrinellus
ENSMZEG00005026445	scrt2	100	98.433	ENSAOCG00000021557	scrt2	100	98.433	Amphiprion_ocellaris
ENSMZEG00005026445	scrt2	96	63.448	ENSAOCG00000023304	-	97	63.448	Amphiprion_ocellaris
ENSMZEG00005026445	scrt2	96	69.565	ENSAOCG00000003910	scrt1b	96	69.565	Amphiprion_ocellaris
ENSMZEG00005026445	scrt2	100	98.433	ENSAPEG00000022558	scrt2	100	98.433	Amphiprion_percula
ENSMZEG00005026445	scrt2	96	63.448	ENSAPEG00000005677	-	97	63.448	Amphiprion_percula
ENSMZEG00005026445	scrt2	96	69.565	ENSAPEG00000000869	scrt1b	96	69.565	Amphiprion_percula
ENSMZEG00005026445	scrt2	100	95.298	ENSATEG00000023998	scrt2	100	95.298	Anabas_testudineus
ENSMZEG00005026445	scrt2	100	63.333	ENSATEG00000003195	-	100	62.349	Anabas_testudineus
ENSMZEG00005026445	scrt2	96	65.248	ENSATEG00000011660	-	97	65.248	Anabas_testudineus
ENSMZEG00005026445	scrt2	96	70.652	ENSATEG00000002302	scrt1b	96	70.652	Anabas_testudineus
ENSMZEG00005026445	scrt2	76	72.811	ENSACAG00000016109	SCRT2	95	72.811	Anolis_carolinensis
ENSMZEG00005026445	scrt2	96	64.286	ENSACLG00000012046	-	97	64.286	Astatotilapia_calliptera
ENSMZEG00005026445	scrt2	96	69.928	ENSACLG00000007162	scrt1b	96	69.928	Astatotilapia_calliptera
ENSMZEG00005026445	scrt2	96	69.928	ENSAMXG00000038085	scrt1a	97	69.928	Astyanax_mexicanus
ENSMZEG00005026445	scrt2	96	67.384	ENSAMXG00000042624	SCRT1	98	67.384	Astyanax_mexicanus
ENSMZEG00005026445	scrt2	87	83.936	ENSAMXG00000034158	scrt2	90	83.936	Astyanax_mexicanus
ENSMZEG00005026445	scrt2	56	60.625	WBGene00000468	ces-1	59	61.250	Caenorhabditis_elegans
ENSMZEG00005026445	scrt2	88	60.000	ENSCPBG00000027613	SCRT2	100	61.868	Chrysemys_picta_bellii
ENSMZEG00005026445	scrt2	97	68.231	ENSCPBG00000018899	SCRT1	97	68.231	Chrysemys_picta_bellii
ENSMZEG00005026445	scrt2	96	62.671	ENSCSEG00000014892	-	97	62.671	Cynoglossus_semilaevis
ENSMZEG00005026445	scrt2	100	91.850	ENSCSEG00000021542	scrt2	100	91.850	Cynoglossus_semilaevis
ENSMZEG00005026445	scrt2	96	68.478	ENSCSEG00000008596	scrt1b	96	68.841	Cynoglossus_semilaevis
ENSMZEG00005026445	scrt2	96	63.448	ENSCVAG00000003190	-	97	63.448	Cyprinodon_variegatus
ENSMZEG00005026445	scrt2	100	96.865	ENSCVAG00000021038	scrt2	100	96.865	Cyprinodon_variegatus
ENSMZEG00005026445	scrt2	96	70.290	ENSCVAG00000009561	scrt1b	96	70.290	Cyprinodon_variegatus
ENSMZEG00005026445	scrt2	96	70.290	ENSDARG00000100821	scrt1a	97	70.290	Danio_rerio
ENSMZEG00005026445	scrt2	96	69.928	ENSDARG00000040214	scrt1b	97	69.928	Danio_rerio
ENSMZEG00005026445	scrt2	99	86.957	ENSELUG00000023883	scrt2	99	88.199	Esox_lucius
ENSMZEG00005026445	scrt2	96	69.818	ENSELUG00000022228	scrt1a	96	69.818	Esox_lucius
ENSMZEG00005026445	scrt2	96	69.928	ENSELUG00000005435	scrt1b	96	69.928	Esox_lucius
ENSMZEG00005026445	scrt2	83	67.227	ENSFALG00000005718	SCRT2	96	68.908	Ficedula_albicollis
ENSMZEG00005026445	scrt2	74	87.162	ENSFDAG00000008733	SCRT1	98	87.162	Fukomys_damarensis
ENSMZEG00005026445	scrt2	100	95.374	ENSFHEG00000005732	scrt2	100	95.374	Fundulus_heteroclitus
ENSMZEG00005026445	scrt2	96	63.793	ENSFHEG00000009794	-	97	63.793	Fundulus_heteroclitus
ENSMZEG00005026445	scrt2	96	69.928	ENSFHEG00000014820	scrt1b	96	69.928	Fundulus_heteroclitus
ENSMZEG00005026445	scrt2	96	67.636	ENSGMOG00000000629	scrt1b	96	67.636	Gadus_morhua
ENSMZEG00005026445	scrt2	99	78.723	ENSGMOG00000019519	scrt2	99	78.723	Gadus_morhua
ENSMZEG00005026445	scrt2	96	62.366	ENSGALG00000028912	SCRT2	97	63.214	Gallus_gallus
ENSMZEG00005026445	scrt2	96	63.406	ENSGAFG00000009650	-	97	63.406	Gambusia_affinis
ENSMZEG00005026445	scrt2	100	90.282	ENSGAFG00000003093	scrt2	100	90.282	Gambusia_affinis
ENSMZEG00005026445	scrt2	96	70.290	ENSGAFG00000007636	scrt1b	96	70.290	Gambusia_affinis
ENSMZEG00005026445	scrt2	96	67.636	ENSGACG00000008982	scrt1b	96	67.636	Gasterosteus_aculeatus
ENSMZEG00005026445	scrt2	96	62.245	ENSGACG00000004072	-	97	62.245	Gasterosteus_aculeatus
ENSMZEG00005026445	scrt2	63	78.142	ENSGAGG00000020760	-	71	78.689	Gopherus_agassizii
ENSMZEG00005026445	scrt2	97	67.148	ENSGAGG00000011736	SCRT1	98	67.148	Gopherus_agassizii
ENSMZEG00005026445	scrt2	96	64.643	ENSGAGG00000020761	SCRT2	97	65.233	Gopherus_agassizii
ENSMZEG00005026445	scrt2	96	69.928	ENSHBUG00000016621	scrt1b	96	69.928	Haplochromis_burtoni
ENSMZEG00005026445	scrt2	96	63.448	ENSHBUG00000019101	-	97	63.448	Haplochromis_burtoni
ENSMZEG00005026445	scrt2	100	100.000	ENSHBUG00000012492	scrt2	100	100.000	Haplochromis_burtoni
ENSMZEG00005026445	scrt2	96	69.203	ENSHCOG00000016704	scrt1b	96	69.203	Hippocampus_comes
ENSMZEG00005026445	scrt2	100	85.938	ENSHCOG00000008116	scrt2	100	85.938	Hippocampus_comes
ENSMZEG00005026445	scrt2	96	60.884	ENSHCOG00000016179	-	97	61.565	Hippocampus_comes
ENSMZEG00005026445	scrt2	96	65.328	ENSIPUG00000005547	-	98	65.328	Ictalurus_punctatus
ENSMZEG00005026445	scrt2	96	69.424	ENSIPUG00000004551	scrt1a	97	69.424	Ictalurus_punctatus
ENSMZEG00005026445	scrt2	51	85.714	ENSSTOG00000032944	SCRT2	76	85.211	Ictidomys_tridecemlineatus
ENSMZEG00005026445	scrt2	96	62.162	ENSKMAG00000009489	-	97	62.162	Kryptolebias_marmoratus
ENSMZEG00005026445	scrt2	100	96.865	ENSKMAG00000018087	scrt2	100	96.865	Kryptolebias_marmoratus
ENSMZEG00005026445	scrt2	96	70.290	ENSKMAG00000005484	scrt1b	96	70.290	Kryptolebias_marmoratus
ENSMZEG00005026445	scrt2	96	61.592	ENSLBEG00000023388	-	97	61.938	Labrus_bergylta
ENSMZEG00005026445	scrt2	100	96.875	ENSLBEG00000015419	scrt2	100	96.875	Labrus_bergylta
ENSMZEG00005026445	scrt2	96	69.455	ENSLACG00000003588	SCRT1	96	69.455	Latimeria_chalumnae
ENSMZEG00005026445	scrt2	96	71.377	ENSLOCG00000007573	scrt1b	97	71.377	Lepisosteus_oculatus
ENSMZEG00005026445	scrt2	100	65.432	ENSLOCG00000002246	scrt2	100	65.839	Lepisosteus_oculatus
ENSMZEG00005026445	scrt2	96	69.928	ENSMAMG00000011698	scrt1b	96	69.928	Mastacembelus_armatus
ENSMZEG00005026445	scrt2	100	97.492	ENSMAMG00000001291	scrt2	100	97.492	Mastacembelus_armatus
ENSMZEG00005026445	scrt2	96	63.448	ENSMZEG00005026702	-	97	63.448	Maylandia_zebra
ENSMZEG00005026445	scrt2	96	69.928	ENSMZEG00005005627	scrt1b	96	69.928	Maylandia_zebra
ENSMZEG00005026445	scrt2	83	67.932	ENSMGAG00000016579	SCRT2	96	68.776	Meleagris_gallopavo
ENSMZEG00005026445	scrt2	99	94.969	ENSMMOG00000009272	scrt2	99	94.969	Mola_mola
ENSMZEG00005026445	scrt2	96	63.793	ENSMMOG00000018345	-	97	63.793	Mola_mola
ENSMZEG00005026445	scrt2	96	69.565	ENSMMOG00000003327	scrt1b	96	69.565	Mola_mola
ENSMZEG00005026445	scrt2	100	90.323	ENSMALG00000013656	scrt2	100	90.323	Monopterus_albus
ENSMZEG00005026445	scrt2	96	70.290	ENSMALG00000012704	scrt1b	96	70.290	Monopterus_albus
ENSMZEG00005026445	scrt2	96	55.303	ENSNGAG00000020815	Scrt2	74	80.263	Nannospalax_galili
ENSMZEG00005026445	scrt2	96	69.203	ENSNBRG00000013983	scrt1b	96	69.203	Neolamprologus_brichardi
ENSMZEG00005026445	scrt2	96	63.448	ENSNBRG00000014882	-	97	63.448	Neolamprologus_brichardi
ENSMZEG00005026445	scrt2	100	99.273	ENSNBRG00000007221	scrt2	100	99.273	Neolamprologus_brichardi
ENSMZEG00005026445	scrt2	96	70.652	ENSONIG00000006007	scrt1b	100	67.820	Oreochromis_niloticus
ENSMZEG00005026445	scrt2	99	63.986	ENSONIG00000003152	-	100	63.986	Oreochromis_niloticus
ENSMZEG00005026445	scrt2	97	59.697	ENSONIG00000019809	-	100	60.586	Oreochromis_niloticus
ENSMZEG00005026445	scrt2	100	99.060	ENSONIG00000016758	scrt2	100	99.060	Oreochromis_niloticus
ENSMZEG00005026445	scrt2	96	61.279	ENSORLG00000022825	-	97	61.279	Oryzias_latipes
ENSMZEG00005026445	scrt2	96	69.565	ENSORLG00000025651	scrt1b	96	69.565	Oryzias_latipes
ENSMZEG00005026445	scrt2	100	95.298	ENSORLG00000024051	scrt2	100	95.298	Oryzias_latipes
ENSMZEG00005026445	scrt2	96	69.565	ENSORLG00020012967	scrt1b	96	69.565	Oryzias_latipes_hni
ENSMZEG00005026445	scrt2	100	95.298	ENSORLG00020011478	scrt2	100	95.298	Oryzias_latipes_hni
ENSMZEG00005026445	scrt2	96	69.565	ENSORLG00015019165	scrt1b	96	69.565	Oryzias_latipes_hsok
ENSMZEG00005026445	scrt2	100	95.298	ENSORLG00015005524	scrt2	100	95.298	Oryzias_latipes_hsok
ENSMZEG00005026445	scrt2	96	61.074	ENSORLG00015010104	-	97	61.074	Oryzias_latipes_hsok
ENSMZEG00005026445	scrt2	96	69.565	ENSOMEG00000003925	scrt1b	96	69.565	Oryzias_melastigma
ENSMZEG00005026445	scrt2	100	95.611	ENSOMEG00000002661	scrt2	100	95.611	Oryzias_melastigma
ENSMZEG00005026445	scrt2	96	62.245	ENSOMEG00000000286	-	97	62.245	Oryzias_melastigma
ENSMZEG00005026445	scrt2	96	69.928	ENSPKIG00000020085	scrt1a	97	69.928	Paramormyrops_kingsleyae
ENSMZEG00005026445	scrt2	96	70.652	ENSPKIG00000022303	SCRT1	97	70.652	Paramormyrops_kingsleyae
ENSMZEG00005026445	scrt2	96	69.231	ENSPMGG00000002260	scrt1b	96	69.231	Periophthalmus_magnuspinnatus
ENSMZEG00005026445	scrt2	100	82.230	ENSPMGG00000016561	scrt2	100	82.230	Periophthalmus_magnuspinnatus
ENSMZEG00005026445	scrt2	96	63.158	ENSPMGG00000021402	-	97	63.158	Periophthalmus_magnuspinnatus
ENSMZEG00005026445	scrt2	96	63.322	ENSPFOG00000005616	-	97	63.322	Poecilia_formosa
ENSMZEG00005026445	scrt2	100	96.865	ENSPFOG00000007738	scrt2	100	96.865	Poecilia_formosa
ENSMZEG00005026445	scrt2	96	70.290	ENSPFOG00000017719	scrt1b	96	70.290	Poecilia_formosa
ENSMZEG00005026445	scrt2	100	94.737	ENSPLAG00000005765	scrt2	100	94.737	Poecilia_latipinna
ENSMZEG00005026445	scrt2	96	70.290	ENSPLAG00000009876	scrt1b	96	70.290	Poecilia_latipinna
ENSMZEG00005026445	scrt2	96	63.322	ENSPLAG00000011718	-	97	63.322	Poecilia_latipinna
ENSMZEG00005026445	scrt2	96	63.322	ENSPMEG00000011706	-	97	63.322	Poecilia_mexicana
ENSMZEG00005026445	scrt2	100	94.737	ENSPMEG00000001538	scrt2	100	94.737	Poecilia_mexicana
ENSMZEG00005026445	scrt2	96	70.290	ENSPMEG00000013274	scrt1b	96	70.290	Poecilia_mexicana
ENSMZEG00005026445	scrt2	96	63.542	ENSPREG00000012166	-	97	63.542	Poecilia_reticulata
ENSMZEG00005026445	scrt2	96	70.290	ENSPREG00000018985	scrt1b	96	70.290	Poecilia_reticulata
ENSMZEG00005026445	scrt2	100	96.552	ENSPREG00000001147	scrt2	100	96.552	Poecilia_reticulata
ENSMZEG00005026445	scrt2	100	100.000	ENSPNYG00000013109	scrt2	100	100.000	Pundamilia_nyererei
ENSMZEG00005026445	scrt2	96	69.928	ENSPNYG00000017733	scrt1b	96	69.928	Pundamilia_nyererei
ENSMZEG00005026445	scrt2	96	63.448	ENSPNYG00000008865	-	97	63.448	Pundamilia_nyererei
ENSMZEG00005026445	scrt2	96	69.928	ENSPNAG00000017415	scrt1a	97	69.928	Pygocentrus_nattereri
ENSMZEG00005026445	scrt2	96	67.509	ENSPNAG00000027880	-	98	67.509	Pygocentrus_nattereri
ENSMZEG00005026445	scrt2	96	69.928	ENSSFOG00015001195	SCRT1	97	69.928	Scleropages_formosus
ENSMZEG00005026445	scrt2	96	61.433	ENSSMAG00000005122	-	97	61.433	Scophthalmus_maximus
ENSMZEG00005026445	scrt2	96	69.565	ENSSMAG00000019207	scrt1b	96	69.565	Scophthalmus_maximus
ENSMZEG00005026445	scrt2	96	63.448	ENSSDUG00000013215	-	97	63.448	Seriola_dumerili
ENSMZEG00005026445	scrt2	97	92.532	ENSSDUG00000001637	scrt2	95	92.532	Seriola_dumerili
ENSMZEG00005026445	scrt2	96	70.290	ENSSDUG00000007752	scrt1b	96	70.290	Seriola_dumerili
ENSMZEG00005026445	scrt2	100	97.492	ENSSLDG00000013565	scrt2	100	97.492	Seriola_lalandi_dorsalis
ENSMZEG00005026445	scrt2	96	70.290	ENSSLDG00000017166	scrt1b	96	70.290	Seriola_lalandi_dorsalis
ENSMZEG00005026445	scrt2	96	63.448	ENSSLDG00000016454	-	97	63.448	Seriola_lalandi_dorsalis
ENSMZEG00005026445	scrt2	96	67.025	ENSSPUG00000018637	SCRT2	97	67.025	Sphenodon_punctatus
ENSMZEG00005026445	scrt2	96	63.793	ENSSPAG00000006788	-	97	63.793	Stegastes_partitus
ENSMZEG00005026445	scrt2	100	98.545	ENSSPAG00000014018	scrt2	100	98.545	Stegastes_partitus
ENSMZEG00005026445	scrt2	96	70.290	ENSSPAG00000002200	scrt1b	96	70.290	Stegastes_partitus
ENSMZEG00005026445	scrt2	83	67.089	ENSTGUG00000006801	SCRT2	99	68.776	Taeniopygia_guttata
ENSMZEG00005026445	scrt2	96	62.373	ENSTRUG00000012719	-	97	63.729	Takifugu_rubripes
ENSMZEG00005026445	scrt2	83	66.667	ENSTRUG00000019558	-	78	69.198	Takifugu_rubripes
ENSMZEG00005026445	scrt2	96	68.364	ENSTRUG00000011637	scrt1b	97	68.364	Takifugu_rubripes
ENSMZEG00005026445	scrt2	99	87.421	ENSTRUG00000007620	scrt2	99	87.421	Takifugu_rubripes
ENSMZEG00005026445	scrt2	96	68.364	ENSTNIG00000018384	scrt1b	96	68.364	Tetraodon_nigroviridis
ENSMZEG00005026445	scrt2	99	91.824	ENSTNIG00000012473	scrt2	99	91.824	Tetraodon_nigroviridis
ENSMZEG00005026445	scrt2	96	70.290	ENSXCOG00000019675	scrt1b	96	70.290	Xiphophorus_couchianus
ENSMZEG00005026445	scrt2	96	62.681	ENSXCOG00000019861	-	97	62.681	Xiphophorus_couchianus
ENSMZEG00005026445	scrt2	100	90.282	ENSXCOG00000014367	scrt2	100	90.282	Xiphophorus_couchianus
ENSMZEG00005026445	scrt2	100	96.238	ENSXMAG00000028567	scrt2	100	96.238	Xiphophorus_maculatus
ENSMZEG00005026445	scrt2	96	62.976	ENSXMAG00000015353	-	97	62.976	Xiphophorus_maculatus
ENSMZEG00005026445	scrt2	96	70.290	ENSXMAG00000027885	scrt1b	96	70.290	Xiphophorus_maculatus