EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026458 (Gene tree)
Gene ID: 101481461
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 5232 bases
Position: chrLG20:22280910-22286141
Accession: 101481461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035404	Mago-bind	PF09282.10	4.9e-13	1	1
ENSMZEP00005035402	Mago-bind	PF09282.10	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036653	-	3494	XM_004554503	ENSMZEP00005035402	211 (aa)	XP_004554560	UPI0003296F70
ENSMZET00005036655	-	573	-	ENSMZEP00005035404	190 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005026458's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03013	RNA transport	KEGG
mze03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026458	pym1	94	59.804	ENSG00000170473	PYM1	94	59.804	Homo_sapiens
ENSMZEG00005026458	pym1	100	85.377	ENSAPOG00000023045	pym1	94	83.500	Acanthochromis_polyacanthus
ENSMZEG00005026458	pym1	91	57.653	ENSAMEG00000003091	PYM1	91	56.122	Ailuropoda_melanoleuca
ENSMZEG00005026458	pym1	100	92.523	ENSACIG00000012769	pym1	100	92.056	Amphilophus_citrinellus
ENSMZEG00005026458	pym1	100	87.204	ENSAOCG00000021358	pym1	100	87.204	Amphiprion_ocellaris
ENSMZEG00005026458	pym1	100	87.204	ENSAPEG00000022679	pym1	100	87.204	Amphiprion_percula
ENSMZEG00005026458	pym1	100	84.834	ENSATEG00000024022	pym1	94	85.930	Anabas_testudineus
ENSMZEG00005026458	pym1	94	62.201	ENSACAG00000005714	PYM1	94	61.244	Anolis_carolinensis
ENSMZEG00005026458	pym1	94	59.804	ENSANAG00000036967	PYM1	94	59.804	Aotus_nancymaae
ENSMZEG00005026458	pym1	98	71.066	ENSAMXG00000007650	pym1	94	68.449	Astyanax_mexicanus
ENSMZEG00005026458	pym1	94	60.784	ENSBTAG00000031146	PYM1	94	60.784	Bos_taurus
ENSMZEG00005026458	pym1	94	59.804	ENSCJAG00000041077	PYM1	94	58.824	Callithrix_jacchus
ENSMZEG00005026458	pym1	94	60.784	ENSCAFG00000000076	PYM1	94	59.804	Canis_familiaris
ENSMZEG00005026458	pym1	94	60.784	ENSCAFG00020026099	PYM1	94	59.804	Canis_lupus_dingo
ENSMZEG00005026458	pym1	94	61.084	ENSCHIG00000026207	PYM1	94	59.606	Capra_hircus
ENSMZEG00005026458	pym1	94	58.333	ENSTSYG00000000787	PYM1	94	58.333	Carlito_syrichta
ENSMZEG00005026458	pym1	89	58.031	ENSCAPG00000010374	PYM1	94	54.639	Cavia_aperea
ENSMZEG00005026458	pym1	94	59.512	ENSCPOG00000031546	PYM1	94	56.311	Cavia_porcellus
ENSMZEG00005026458	pym1	94	59.804	ENSCCAG00000026187	PYM1	94	59.804	Cebus_capucinus
ENSMZEG00005026458	pym1	94	60.294	ENSCATG00000018801	PYM1	94	59.314	Cercocebus_atys
ENSMZEG00005026458	pym1	94	59.606	ENSCLAG00000007964	PYM1	94	57.635	Chinchilla_lanigera
ENSMZEG00005026458	pym1	90	59.067	ENSCSAG00000005291	PYM1	92	58.031	Chlorocebus_sabaeus
ENSMZEG00005026458	pym1	98	41.627	ENSCING00000006448	-	92	42.289	Ciona_intestinalis
ENSMZEG00005026458	pym1	98	40.284	ENSCSAVG00000009805	-	87	39.594	Ciona_savignyi
ENSMZEG00005026458	pym1	93	56.219	ENSCANG00000019757	-	85	57.214	Colobus_angolensis_palliatus
ENSMZEG00005026458	pym1	94	60.294	ENSCANG00000020338	-	94	59.314	Colobus_angolensis_palliatus
ENSMZEG00005026458	pym1	88	51.892	ENSCGRG00001004231	-	90	51.546	Cricetulus_griseus_chok1gshd
ENSMZEG00005026458	pym1	94	57.561	ENSCGRG00001018051	-	94	56.250	Cricetulus_griseus_chok1gshd
ENSMZEG00005026458	pym1	88	51.892	ENSCGRG00000018933	-	90	51.546	Cricetulus_griseus_crigri
ENSMZEG00005026458	pym1	94	57.561	ENSCGRG00000012495	-	94	56.250	Cricetulus_griseus_crigri
ENSMZEG00005026458	pym1	100	76.056	ENSCSEG00000021531	pym1	100	77.670	Cynoglossus_semilaevis
ENSMZEG00005026458	pym1	99	80.288	ENSCVAG00000017360	pym1	88	80.288	Cyprinodon_variegatus
ENSMZEG00005026458	pym1	100	58.824	ENSDARG00000046024	pym1	94	56.633	Danio_rerio
ENSMZEG00005026458	pym1	94	58.333	ENSDNOG00000048414	PYM1	85	57.711	Dasypus_novemcinctus
ENSMZEG00005026458	pym1	94	59.804	ENSDORG00000029448	Pym1	94	58.128	Dipodomys_ordii
ENSMZEG00005026458	pym1	90	54.167	ENSETEG00000004461	-	94	53.646	Echinops_telfairi
ENSMZEG00005026458	pym1	89	57.592	ENSEASG00005002271	PYM1	81	56.545	Equus_asinus_asinus
ENSMZEG00005026458	pym1	94	60.591	ENSECAG00000011870	PYM1	94	59.113	Equus_caballus
ENSMZEG00005026458	pym1	100	69.194	ENSELUG00000024250	pym1	94	67.337	Esox_lucius
ENSMZEG00005026458	pym1	94	59.804	ENSFCAG00000013967	PYM1	94	58.824	Felis_catus
ENSMZEG00005026458	pym1	94	61.275	ENSFDAG00000006314	PYM1	94	60.294	Fukomys_damarensis
ENSMZEG00005026458	pym1	94	81.683	ENSFHEG00000005884	pym1	100	81.308	Fundulus_heteroclitus
ENSMZEG00005026458	pym1	94	64.141	ENSGMOG00000007239	pym1	93	64.767	Gadus_morhua
ENSMZEG00005026458	pym1	94	64.356	ENSGALG00000046169	PYM1	94	64.356	Gallus_gallus
ENSMZEG00005026458	pym1	100	79.167	ENSGAFG00000003280	pym1	93	78.218	Gambusia_affinis
ENSMZEG00005026458	pym1	100	74.882	ENSGACG00000010703	pym1	94	74.874	Gasterosteus_aculeatus
ENSMZEG00005026458	pym1	90	58.883	ENSGAGG00000001973	PYM1	84	57.000	Gopherus_agassizii
ENSMZEG00005026458	pym1	94	59.314	ENSGGOG00000043246	PYM1	94	59.314	Gorilla_gorilla
ENSMZEG00005026458	pym1	100	99.526	ENSHBUG00000012719	pym1	100	99.526	Haplochromis_burtoni
ENSMZEG00005026458	pym1	94	59.804	ENSHGLG00000017155	PYM1	93	59.204	Heterocephalus_glaber_female
ENSMZEG00005026458	pym1	94	59.804	ENSHGLG00100015341	PYM1	93	59.204	Heterocephalus_glaber_male
ENSMZEG00005026458	pym1	100	72.195	ENSHCOG00000007987	pym1	81	72.917	Hippocampus_comes
ENSMZEG00005026458	pym1	99	69.811	ENSIPUG00000005975	wibga	94	69.154	Ictalurus_punctatus
ENSMZEG00005026458	pym1	94	59.709	ENSSTOG00000014206	PYM1	94	57.282	Ictidomys_tridecemlineatus
ENSMZEG00005026458	pym1	94	57.500	ENSJJAG00000013338	Pym1	94	56.000	Jaculus_jaculus
ENSMZEG00005026458	pym1	100	82.353	ENSKMAG00000006351	pym1	95	82.297	Kryptolebias_marmoratus
ENSMZEG00005026458	pym1	100	78.673	ENSLBEG00000015707	pym1	100	76.777	Labrus_bergylta
ENSMZEG00005026458	pym1	90	63.500	ENSLACG00000014398	PYM1	89	63.500	Latimeria_chalumnae
ENSMZEG00005026458	pym1	94	60.784	ENSLAFG00000002369	PYM1	94	59.804	Loxodonta_africana
ENSMZEG00005026458	pym1	94	60.294	ENSMFAG00000003048	PYM1	94	59.314	Macaca_fascicularis
ENSMZEG00005026458	pym1	94	60.294	ENSMMUG00000011002	PYM1	94	59.314	Macaca_mulatta
ENSMZEG00005026458	pym1	94	60.294	ENSMNEG00000034677	PYM1	94	59.314	Macaca_nemestrina
ENSMZEG00005026458	pym1	94	60.294	ENSMLEG00000007971	PYM1	94	59.314	Mandrillus_leucophaeus
ENSMZEG00005026458	pym1	100	83.486	ENSMAMG00000001588	pym1	94	84.466	Mastacembelus_armatus
ENSMZEG00005026458	pym1	94	57.843	ENSMAUG00000007318	Pym1	94	58.333	Mesocricetus_auratus
ENSMZEG00005026458	pym1	94	59.314	ENSMICG00000032962	PYM1	94	58.333	Microcebus_murinus
ENSMZEG00005026458	pym1	94	57.143	ENSMOCG00000010208	Pym1	94	56.585	Microtus_ochrogaster
ENSMZEG00005026458	pym1	100	77.202	ENSMMOG00000009301	pym1	100	69.668	Mola_mola
ENSMZEG00005026458	pym1	100	82.160	ENSMALG00000013496	pym1	100	82.629	Monopterus_albus
ENSMZEG00005026458	pym1	93	59.000	MGP_CAROLIEiJ_G0015953	Pym1	93	57.500	Mus_caroli
ENSMZEG00005026458	pym1	94	57.143	ENSMUSG00000064030	Pym1	93	56.500	Mus_musculus
ENSMZEG00005026458	pym1	94	59.799	MGP_PahariEiJ_G0031131	Pym1	93	59.799	Mus_pahari
ENSMZEG00005026458	pym1	94	57.143	MGP_SPRETEiJ_G0016778	Pym1	93	56.500	Mus_spretus
ENSMZEG00005026458	pym1	94	59.804	ENSMPUG00000000931	PYM1	94	58.824	Mustela_putorius_furo
ENSMZEG00005026458	pym1	94	56.158	ENSMLUG00000003586	PYM1	93	57.000	Myotis_lucifugus
ENSMZEG00005026458	pym1	90	56.701	ENSNGAG00000019207	Pym1	88	55.670	Nannospalax_galili
ENSMZEG00005026458	pym1	100	99.052	ENSNBRG00000006951	pym1	100	99.052	Neolamprologus_brichardi
ENSMZEG00005026458	pym1	94	59.804	ENSNLEG00000017588	PYM1	94	59.804	Nomascus_leucogenys
ENSMZEG00005026458	pym1	88	56.085	ENSMEUG00000001017	PYM1	92	55.026	Notamacropus_eugenii
ENSMZEG00005026458	pym1	92	55.556	ENSOPRG00000007797	PYM1	91	54.774	Ochotona_princeps
ENSMZEG00005026458	pym1	94	59.804	ENSODEG00000004289	PYM1	94	58.824	Octodon_degus
ENSMZEG00005026458	pym1	100	96.262	ENSONIG00000016740	pym1	100	96.262	Oreochromis_niloticus
ENSMZEG00005026458	pym1	90	58.031	ENSOCUG00000025969	PYM1	81	56.995	Oryctolagus_cuniculus
ENSMZEG00005026458	pym1	100	77.725	ENSORLG00000030592	pym1	100	76.303	Oryzias_latipes
ENSMZEG00005026458	pym1	100	76.415	ENSORLG00020011264	pym1	94	76.000	Oryzias_latipes_hni
ENSMZEG00005026458	pym1	100	78.199	ENSORLG00015005287	pym1	100	77.251	Oryzias_latipes_hsok
ENSMZEG00005026458	pym1	100	78.605	ENSOMEG00000022250	pym1	100	79.070	Oryzias_melastigma
ENSMZEG00005026458	pym1	90	59.067	ENSOGAG00000007038	PYM1	88	59.067	Otolemur_garnettii
ENSMZEG00005026458	pym1	94	61.084	ENSOARG00000010856	PYM1	94	59.606	Ovis_aries
ENSMZEG00005026458	pym1	94	59.804	ENSPPAG00000043630	PYM1	94	59.804	Pan_paniscus
ENSMZEG00005026458	pym1	94	61.165	ENSPPRG00000013243	PYM1	94	58.824	Panthera_pardus
ENSMZEG00005026458	pym1	94	60.680	ENSPTIG00000017380	PYM1	94	58.333	Panthera_tigris_altaica
ENSMZEG00005026458	pym1	94	59.804	ENSPTRG00000005067	PYM1	94	59.804	Pan_troglodytes
ENSMZEG00005026458	pym1	94	60.784	ENSPANG00000009562	PYM1	94	59.804	Papio_anubis
ENSMZEG00005026458	pym1	99	68.778	ENSPKIG00000006301	pym1	94	67.619	Paramormyrops_kingsleyae
ENSMZEG00005026458	pym1	94	55.072	ENSPSIG00000003043	PYM1	94	55.981	Pelodiscus_sinensis
ENSMZEG00005026458	pym1	99	72.727	ENSPMGG00000023161	pym1	94	72.193	Periophthalmus_magnuspinnatus
ENSMZEG00005026458	pym1	94	57.143	ENSPEMG00000009372	Pym1	94	58.333	Peromyscus_maniculatus_bairdii
ENSMZEG00005026458	pym1	88	56.085	ENSPCIG00000024658	PYM1	87	54.688	Phascolarctos_cinereus
ENSMZEG00005026458	pym1	100	81.604	ENSPFOG00000008193	pym1	100	81.132	Poecilia_formosa
ENSMZEG00005026458	pym1	100	81.308	ENSPLAG00000009228	pym1	93	81.500	Poecilia_latipinna
ENSMZEG00005026458	pym1	100	81.308	ENSPMEG00000001505	pym1	100	80.841	Poecilia_mexicana
ENSMZEG00005026458	pym1	91	57.436	ENSPPYG00000004635	PYM1	92	56.477	Pongo_abelii
ENSMZEG00005026458	pym1	94	59.314	ENSPCOG00000019706	PYM1	94	57.843	Propithecus_coquereli
ENSMZEG00005026458	pym1	91	59.487	ENSPVAG00000011437	PYM1	93	59.487	Pteropus_vampyrus
ENSMZEG00005026458	pym1	100	98.421	ENSPNYG00000012871	pym1	100	98.421	Pundamilia_nyererei
ENSMZEG00005026458	pym1	99	64.019	ENSPNAG00000018833	pym1	94	66.829	Pygocentrus_nattereri
ENSMZEG00005026458	pym1	94	57.214	ENSRNOG00000058130	Pym1	91	58.081	Rattus_norvegicus
ENSMZEG00005026458	pym1	80	49.704	ENSRNOG00000049415	AABR07055413.1	51	61.538	Rattus_norvegicus
ENSMZEG00005026458	pym1	94	56.373	ENSRBIG00000033362	PYM1	94	52.709	Rhinopithecus_bieti
ENSMZEG00005026458	pym1	94	60.294	ENSRROG00000043620	PYM1	94	59.314	Rhinopithecus_roxellana
ENSMZEG00005026458	pym1	94	59.804	ENSSBOG00000029393	PYM1	94	59.804	Saimiri_boliviensis_boliviensis
ENSMZEG00005026458	pym1	93	59.000	ENSSHAG00000008280	PYM1	93	57.000	Sarcophilus_harrisii
ENSMZEG00005026458	pym1	92	67.725	ENSSFOG00015021475	pym1	100	66.667	Scleropages_formosus
ENSMZEG00005026458	pym1	100	78.673	ENSSMAG00000020912	pym1	94	79.397	Scophthalmus_maximus
ENSMZEG00005026458	pym1	100	85.981	ENSSDUG00000001807	pym1	94	86.634	Seriola_dumerili
ENSMZEG00005026458	pym1	100	85.185	ENSSLDG00000013730	pym1	94	85.294	Seriola_lalandi_dorsalis
ENSMZEG00005026458	pym1	90	58.462	ENSSARG00000009569	PYM1	94	56.771	Sorex_araneus
ENSMZEG00005026458	pym1	91	58.163	ENSSPUG00000015059	PYM1	91	55.208	Sphenodon_punctatus
ENSMZEG00005026458	pym1	100	86.512	ENSSPAG00000020100	pym1	94	87.685	Stegastes_partitus
ENSMZEG00005026458	pym1	94	60.294	ENSSSCG00000040825	PYM1	94	60.099	Sus_scrofa
ENSMZEG00005026458	pym1	99	78.095	ENSTRUG00000021367	pym1	94	78.173	Takifugu_rubripes
ENSMZEG00005026458	pym1	100	71.144	ENSTNIG00000012534	pym1	93	78.610	Tetraodon_nigroviridis
ENSMZEG00005026458	pym1	88	56.842	ENSTBEG00000004208	PYM1	92	55.263	Tupaia_belangeri
ENSMZEG00005026458	pym1	91	58.763	ENSTTRG00000014971	PYM1	92	60.309	Tursiops_truncatus
ENSMZEG00005026458	pym1	94	59.113	ENSUAMG00000014521	PYM1	94	57.635	Ursus_americanus
ENSMZEG00005026458	pym1	89	57.895	ENSUMAG00000016241	PYM1	80	56.383	Ursus_maritimus
ENSMZEG00005026458	pym1	94	60.294	ENSVVUG00000022749	PYM1	94	59.314	Vulpes_vulpes
ENSMZEG00005026458	pym1	94	65.285	ENSXETG00000021850	pym1	94	63.819	Xenopus_tropicalis
ENSMZEG00005026458	pym1	100	80.374	ENSXMAG00000011649	pym1	93	80.500	Xiphophorus_maculatus