EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026462 (Gene tree)
Gene ID: 101465394
Gene Symbol: pan2 (1 of many)
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 158750 bases
Position: chrLG20:22311754-22470503
Accession: 101465394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035413	RNase_T	PF00929.24	5.7e-20	1	1
ENSMZEP00005035411	RNase_T	PF00929.24	5.7e-20	1	1
ENSMZEP00005035409	RNase_T	PF00929.24	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036664	-	3588	-	ENSMZEP00005035413	1195 (aa)	-	-
ENSMZET00005036660	-	3504	-	ENSMZEP00005035409	1111 (aa)	-	-
ENSMZET00005036662	-	4970	XM_004560441	ENSMZEP00005035411	1208 (aa)	XP_004560498	UPI000329A9BB

Gene Model

Click here to download ENSMZEG00005026462's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026462	pan2	100	95.620	ENSAPOG00000022955	pan2	100	95.455	Acanthochromis_polyacanthus
ENSMZEG00005026462	pan2	99	75.874	ENSAMEG00000003824	PAN2	100	75.802	Ailuropoda_melanoleuca
ENSMZEG00005026462	pan2	99	73.357	ENSACIG00000012858	PAN2	99	72.643	Amphilophus_citrinellus
ENSMZEG00005026462	pan2	99	93.012	ENSACIG00000013079	pan2	99	92.379	Amphilophus_citrinellus
ENSMZEG00005026462	pan2	100	95.455	ENSAOCG00000022334	pan2	100	95.289	Amphiprion_ocellaris
ENSMZEG00005026462	pan2	100	95.620	ENSAPEG00000022760	pan2	100	95.455	Amphiprion_percula
ENSMZEG00005026462	pan2	99	95.333	ENSATEG00000024030	pan2	100	95.167	Anabas_testudineus
ENSMZEG00005026462	pan2	99	76.523	ENSAPLG00000005195	PAN2	100	77.297	Anas_platyrhynchos
ENSMZEG00005026462	pan2	99	77.310	ENSACAG00000007067	PAN2	100	77.310	Anolis_carolinensis
ENSMZEG00005026462	pan2	99	75.541	ENSANAG00000036468	PAN2	97	83.152	Aotus_nancymaae
ENSMZEG00005026462	pan2	98	73.462	ENSACLG00000023821	pan2	99	72.152	Astatotilapia_calliptera
ENSMZEG00005026462	pan2	100	100.000	ENSACLG00000023674	pan2	100	100.000	Astatotilapia_calliptera
ENSMZEG00005026462	pan2	99	87.396	ENSAMXG00000005418	pan2	98	87.323	Astyanax_mexicanus
ENSMZEG00005026462	pan2	99	75.707	ENSBTAG00000004376	PAN2	100	75.638	Bos_taurus
ENSMZEG00005026462	pan2	81	30.754	WBGene00017951	panl-2	70	40.138	Caenorhabditis_elegans
ENSMZEG00005026462	pan2	99	75.374	ENSCJAG00000011141	PAN2	100	75.226	Callithrix_jacchus
ENSMZEG00005026462	pan2	99	75.624	ENSCAFG00000000119	PAN2	94	83.880	Canis_familiaris
ENSMZEG00005026462	pan2	99	75.436	ENSCAFG00020024865	PAN2	100	74.587	Canis_lupus_dingo
ENSMZEG00005026462	pan2	99	75.289	ENSCHIG00000026935	PAN2	100	74.837	Capra_hircus
ENSMZEG00005026462	pan2	99	75.124	ENSTSYG00000006927	PAN2	97	82.880	Carlito_syrichta
ENSMZEG00005026462	pan2	99	75.537	ENSCPOG00000014918	PAN2	100	75.307	Cavia_porcellus
ENSMZEG00005026462	pan2	99	75.541	ENSCCAG00000036637	PAN2	97	82.880	Cebus_capucinus
ENSMZEG00005026462	pan2	99	75.374	ENSCATG00000045076	PAN2	97	83.607	Cercocebus_atys
ENSMZEG00005026462	pan2	99	75.433	ENSCLAG00000011700	PAN2	100	75.061	Chinchilla_lanigera
ENSMZEG00005026462	pan2	99	75.291	ENSCSAG00000005173	PAN2	100	75.062	Chlorocebus_sabaeus
ENSMZEG00005026462	pan2	99	77.475	ENSCPBG00000014029	PAN2	100	77.393	Chrysemys_picta_bellii
ENSMZEG00005026462	pan2	91	46.503	ENSCSAVG00000003833	-	97	61.224	Ciona_savignyi
ENSMZEG00005026462	pan2	99	74.065	ENSCANG00000017798	PAN2	100	73.931	Colobus_angolensis_palliatus
ENSMZEG00005026462	pan2	99	76.040	ENSCGRG00001019707	Pan2	100	75.740	Cricetulus_griseus_chok1gshd
ENSMZEG00005026462	pan2	99	75.310	ENSCGRG00000009996	Pan2	100	75.020	Cricetulus_griseus_crigri
ENSMZEG00005026462	pan2	100	88.678	ENSCSEG00000021529	pan2	100	88.512	Cynoglossus_semilaevis
ENSMZEG00005026462	pan2	100	93.223	ENSCVAG00000010197	pan2	100	93.058	Cyprinodon_variegatus
ENSMZEG00005026462	pan2	100	86.435	ENSDARG00000074675	pan2	100	86.435	Danio_rerio
ENSMZEG00005026462	pan2	99	75.770	ENSDNOG00000010940	PAN2	100	75.763	Dasypus_novemcinctus
ENSMZEG00005026462	pan2	98	41.575	FBgn0033352	PAN2	99	41.417	Drosophila_melanogaster
ENSMZEG00005026462	pan2	75	84.789	ENSETEG00000012041	PAN2	81	85.549	Echinops_telfairi
ENSMZEG00005026462	pan2	99	56.397	ENSEBUG00000002773	pan2	98	56.397	Eptatretus_burgeri
ENSMZEG00005026462	pan2	99	75.876	ENSEASG00005005235	PAN2	100	75.307	Equus_asinus_asinus
ENSMZEG00005026462	pan2	99	75.874	ENSECAG00000019814	PAN2	100	75.802	Equus_caballus
ENSMZEG00005026462	pan2	100	88.362	ENSELUG00000024604	pan2	99	88.898	Esox_lucius
ENSMZEG00005026462	pan2	99	75.707	ENSFCAG00000012021	PAN2	100	75.638	Felis_catus
ENSMZEG00005026462	pan2	99	77.722	ENSFALG00000000464	PAN2	99	77.318	Ficedula_albicollis
ENSMZEG00005026462	pan2	99	75.392	ENSFDAG00000017104	PAN2	100	75.265	Fukomys_damarensis
ENSMZEG00005026462	pan2	91	92.325	ENSFHEG00000000157	pan2	97	92.325	Fundulus_heteroclitus
ENSMZEG00005026462	pan2	100	87.469	ENSGMOG00000007249	pan2	99	86.974	Gadus_morhua
ENSMZEG00005026462	pan2	99	78.055	ENSGALG00000031512	PAN2	100	77.723	Gallus_gallus
ENSMZEG00005026462	pan2	100	92.893	ENSGAFG00000000284	pan2	100	92.727	Gambusia_affinis
ENSMZEG00005026462	pan2	100	91.934	ENSGACG00000010722	pan2	99	91.934	Gasterosteus_aculeatus
ENSMZEG00005026462	pan2	99	77.063	ENSGAGG00000007868	PAN2	100	77.063	Gopherus_agassizii
ENSMZEG00005026462	pan2	99	75.374	ENSGGOG00000009115	PAN2	97	83.607	Gorilla_gorilla
ENSMZEG00005026462	pan2	100	99.749	ENSHBUG00000005234	pan2	100	99.749	Haplochromis_burtoni
ENSMZEG00005026462	pan2	99	75.041	ENSHGLG00000005647	PAN2	99	74.959	Heterocephalus_glaber_female
ENSMZEG00005026462	pan2	99	74.793	ENSHGLG00100014057	PAN2	99	74.711	Heterocephalus_glaber_male
ENSMZEG00005026462	pan2	100	91.322	ENSHCOG00000007920	pan2	100	90.909	Hippocampus_comes
ENSMZEG00005026462	pan2	100	86.921	ENSIPUG00000011065	PAN2	100	86.921	Ictalurus_punctatus
ENSMZEG00005026462	pan2	94	76.484	ENSSTOG00000015974	PAN2	100	75.508	Ictidomys_tridecemlineatus
ENSMZEG00005026462	pan2	99	75.354	ENSJJAG00000013044	Pan2	98	74.835	Jaculus_jaculus
ENSMZEG00005026462	pan2	100	93.967	ENSKMAG00000006192	pan2	100	93.802	Kryptolebias_marmoratus
ENSMZEG00005026462	pan2	99	88.358	ENSLBEG00000015763	pan2	97	93.490	Labrus_bergylta
ENSMZEG00005026462	pan2	99	71.244	ENSLACG00000018694	PAN2	100	70.921	Latimeria_chalumnae
ENSMZEG00005026462	pan2	100	86.315	ENSLOCG00000004333	pan2	99	86.315	Lepisosteus_oculatus
ENSMZEG00005026462	pan2	99	73.546	ENSLAFG00000014873	PAN2	100	73.546	Loxodonta_africana
ENSMZEG00005026462	pan2	99	75.291	ENSMFAG00000002293	PAN2	97	83.607	Macaca_fascicularis
ENSMZEG00005026462	pan2	99	75.291	ENSMMUG00000013482	PAN2	94	83.607	Macaca_mulatta
ENSMZEG00005026462	pan2	99	75.374	ENSMNEG00000033264	PAN2	97	83.333	Macaca_nemestrina
ENSMZEG00005026462	pan2	99	75.458	ENSMLEG00000037388	PAN2	97	83.607	Mandrillus_leucophaeus
ENSMZEG00005026462	pan2	99	94.706	ENSMAMG00000001624	pan2	100	94.541	Mastacembelus_armatus
ENSMZEG00005026462	pan2	98	74.724	ENSMZEG00005026472	pan2	99	73.333	Maylandia_zebra
ENSMZEG00005026462	pan2	99	77.151	ENSMGAG00000001439	PAN2	99	78.276	Meleagris_gallopavo
ENSMZEG00005026462	pan2	100	75.700	ENSMAUG00000012602	Pan2	99	75.598	Mesocricetus_auratus
ENSMZEG00005026462	pan2	99	75.707	ENSMICG00000017661	PAN2	97	81.593	Microcebus_murinus
ENSMZEG00005026462	pan2	99	75.707	ENSMOCG00000007191	Pan2	100	75.411	Microtus_ochrogaster
ENSMZEG00005026462	pan2	100	92.417	ENSMMOG00000009313	pan2	98	92.494	Mola_mola
ENSMZEG00005026462	pan2	99	94.376	ENSMALG00000013377	pan2	100	94.210	Monopterus_albus
ENSMZEG00005026462	pan2	99	75.103	MGP_CAROLIEiJ_G0015930	Pan2	100	74.898	Mus_caroli
ENSMZEG00005026462	pan2	99	75.667	ENSMUSG00000005682	Pan2	100	75.535	Mus_musculus
ENSMZEG00005026462	pan2	99	75.186	MGP_PahariEiJ_G0031154	Pan2	100	75.061	Mus_pahari
ENSMZEG00005026462	pan2	99	75.750	MGP_SPRETEiJ_G0016755	Pan2	100	75.618	Mus_spretus
ENSMZEG00005026462	pan2	99	75.874	ENSMPUG00000001383	PAN2	100	75.802	Mustela_putorius_furo
ENSMZEG00005026462	pan2	99	75.493	ENSMLUG00000006737	PAN2	100	75.309	Myotis_lucifugus
ENSMZEG00005026462	pan2	99	75.707	ENSNGAG00000007930	Pan2	100	75.411	Nannospalax_galili
ENSMZEG00005026462	pan2	92	100.000	ENSNBRG00000006585	pan2	99	100.000	Neolamprologus_brichardi
ENSMZEG00005026462	pan2	99	71.393	ENSNLEG00000017499	PAN2	97	83.060	Nomascus_leucogenys
ENSMZEG00005026462	pan2	99	77.038	ENSMEUG00000010125	PAN2	100	76.936	Notamacropus_eugenii
ENSMZEG00005026462	pan2	99	75.083	ENSOPRG00000001468	PAN2	100	75.062	Ochotona_princeps
ENSMZEG00005026462	pan2	99	74.878	ENSODEG00000007203	PAN2	100	74.531	Octodon_degus
ENSMZEG00005026462	pan2	99	96.275	ENSONIG00000016732	pan2	100	95.748	Oreochromis_niloticus
ENSMZEG00005026462	pan2	82	67.900	ENSOANG00000005151	PAN2	99	68.232	Ornithorhynchus_anatinus
ENSMZEG00005026462	pan2	99	75.310	ENSOCUG00000007227	PAN2	100	75.143	Oryctolagus_cuniculus
ENSMZEG00005026462	pan2	99	92.479	ENSORLG00000015195	pan2	100	92.231	Oryzias_latipes
ENSMZEG00005026462	pan2	99	92.397	ENSORLG00020000277	pan2	100	92.149	Oryzias_latipes_hni
ENSMZEG00005026462	pan2	99	92.149	ENSORLG00015005193	pan2	100	91.901	Oryzias_latipes_hsok
ENSMZEG00005026462	pan2	99	92.231	ENSOMEG00000022087	pan2	100	91.983	Oryzias_melastigma
ENSMZEG00005026462	pan2	99	74.752	ENSOGAG00000030620	PAN2	100	74.449	Otolemur_garnettii
ENSMZEG00005026462	pan2	99	75.624	ENSOARG00000009379	PAN2	100	75.556	Ovis_aries
ENSMZEG00005026462	pan2	99	75.374	ENSPPAG00000001208	PAN2	97	83.607	Pan_paniscus
ENSMZEG00005026462	pan2	99	75.624	ENSPPRG00000021586	PAN2	100	75.556	Panthera_pardus
ENSMZEG00005026462	pan2	99	72.020	ENSPTIG00000012494	PAN2	100	71.826	Panthera_tigris_altaica
ENSMZEG00005026462	pan2	99	75.374	ENSPTRG00000052054	PAN2	97	83.607	Pan_troglodytes
ENSMZEG00005026462	pan2	92	76.812	ENSPANG00000018906	PAN2	97	83.607	Papio_anubis
ENSMZEG00005026462	pan2	100	87.107	ENSPKIG00000003973	pan2	100	86.921	Paramormyrops_kingsleyae
ENSMZEG00005026462	pan2	99	74.217	ENSPSIG00000003267	PAN2	100	74.217	Pelodiscus_sinensis
ENSMZEG00005026462	pan2	99	91.253	ENSPMGG00000023186	pan2	100	90.646	Periophthalmus_magnuspinnatus
ENSMZEG00005026462	pan2	99	75.289	ENSPEMG00000018505	Pan2	100	74.531	Peromyscus_maniculatus_bairdii
ENSMZEG00005026462	pan2	91	67.486	ENSPMAG00000004731	pan2	100	67.213	Petromyzon_marinus
ENSMZEG00005026462	pan2	99	77.333	ENSPCIG00000024643	PAN2	100	77.228	Phascolarctos_cinereus
ENSMZEG00005026462	pan2	100	93.306	ENSPFOG00000008392	pan2	100	93.140	Poecilia_formosa
ENSMZEG00005026462	pan2	100	93.223	ENSPLAG00000009198	pan2	100	93.058	Poecilia_latipinna
ENSMZEG00005026462	pan2	100	93.223	ENSPMEG00000001484	pan2	100	93.058	Poecilia_mexicana
ENSMZEG00005026462	pan2	100	93.388	ENSPREG00000000900	pan2	100	93.223	Poecilia_reticulata
ENSMZEG00005026462	pan2	88	77.504	ENSPPYG00000004656	PAN2	99	77.504	Pongo_abelii
ENSMZEG00005026462	pan2	92	77.020	ENSPCAG00000011047	PAN2	99	77.020	Procavia_capensis
ENSMZEG00005026462	pan2	99	75.790	ENSPCOG00000018263	PAN2	100	75.556	Propithecus_coquereli
ENSMZEG00005026462	pan2	94	73.652	ENSPVAG00000007591	PAN2	94	73.598	Pteropus_vampyrus
ENSMZEG00005026462	pan2	100	99.916	ENSPNYG00000002629	pan2	100	99.916	Pundamilia_nyererei
ENSMZEG00005026462	pan2	100	88.162	ENSPNAG00000027140	pan2	100	88.162	Pygocentrus_nattereri
ENSMZEG00005026462	pan2	99	75.783	ENSRNOG00000032441	Pan2	100	75.700	Rattus_norvegicus
ENSMZEG00005026462	pan2	99	75.208	ENSRBIG00000029591	PAN2	97	83.060	Rhinopithecus_bieti
ENSMZEG00005026462	pan2	99	75.208	ENSRROG00000041950	PAN2	97	83.060	Rhinopithecus_roxellana
ENSMZEG00005026462	pan2	99	75.374	ENSSBOG00000027343	PAN2	97	82.880	Saimiri_boliviensis_boliviensis
ENSMZEG00005026462	pan2	92	77.358	ENSSHAG00000000122	PAN2	99	78.558	Sarcophilus_harrisii
ENSMZEG00005026462	pan2	100	86.672	ENSSFOG00015017740	pan2	100	86.672	Scleropages_formosus
ENSMZEG00005026462	pan2	100	93.069	ENSSMAG00000020901	pan2	100	92.987	Scophthalmus_maximus
ENSMZEG00005026462	pan2	100	95.868	ENSSDUG00000001840	pan2	100	95.702	Seriola_dumerili
ENSMZEG00005026462	pan2	100	95.537	ENSSLDG00000013866	pan2	100	95.372	Seriola_lalandi_dorsalis
ENSMZEG00005026462	pan2	92	76.325	ENSSARG00000013350	PAN2	92	76.325	Sorex_araneus
ENSMZEG00005026462	pan2	92	79.354	ENSSPUG00000004270	PAN2	99	79.372	Sphenodon_punctatus
ENSMZEG00005026462	pan2	100	95.372	ENSSPAG00000019970	pan2	100	95.207	Stegastes_partitus
ENSMZEG00005026462	pan2	99	75.374	ENSSSCG00000000393	PAN2	100	75.309	Sus_scrofa
ENSMZEG00005026462	pan2	100	92.975	ENSTRUG00000014260	pan2	100	92.810	Takifugu_rubripes
ENSMZEG00005026462	pan2	100	92.727	ENSTNIG00000012537	pan2	99	92.645	Tetraodon_nigroviridis
ENSMZEG00005026462	pan2	80	75.269	ENSTTRG00000007150	PAN2	80	75.101	Tursiops_truncatus
ENSMZEG00005026462	pan2	99	75.856	ENSUAMG00000026522	PAN2	100	75.658	Ursus_americanus
ENSMZEG00005026462	pan2	99	75.145	ENSUMAG00000017020	PAN2	100	74.755	Ursus_maritimus
ENSMZEG00005026462	pan2	79	91.133	ENSVPAG00000007309	PAN2	84	91.133	Vicugna_pacos
ENSMZEG00005026462	pan2	99	75.624	ENSVVUG00000021878	PAN2	100	75.556	Vulpes_vulpes
ENSMZEG00005026462	pan2	99	74.236	ENSXETG00000009434	pan2	100	75.084	Xenopus_tropicalis
ENSMZEG00005026462	pan2	99	88.354	ENSXCOG00000014391	pan2	100	87.583	Xiphophorus_couchianus
ENSMZEG00005026462	pan2	100	93.306	ENSXMAG00000011661	pan2	100	93.140	Xiphophorus_maculatus