EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026469 (Gene tree)
Gene ID: 101479418
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 297435 bases
Position: chrLG22:11333014-11630448
Accession: 101479418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035420	RRM_1	PF00076.22	3.6e-31	1	2
ENSMZEP00005035420	RRM_1	PF00076.22	3.6e-31	2	2
ENSMZEP00005035421	RRM_1	PF00076.22	6e-31	1	2
ENSMZEP00005035421	RRM_1	PF00076.22	6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036672	-	1882	XM_004549001	ENSMZEP00005035421	527 (aa)	XP_004549058	UPI000329E092
ENSMZET00005036671	-	1335	XM_012918614	ENSMZEP00005035420	444 (aa)	XP_012774068	-

Gene Model

Click here to download ENSMZEG00005026469's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026469's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026469	-	96	86.136	ENSG00000144642	RBMS3	100	90.152	Homo_sapiens
ENSMZEG00005026469	-	96	71.975	ENSAPOG00000007266	rbms3	100	72.187	Acanthochromis_polyacanthus
ENSMZEG00005026469	-	100	94.318	ENSAPOG00000003432	-	100	96.253	Acanthochromis_polyacanthus
ENSMZEG00005026469	-	67	85.621	ENSAMEG00000005947	RBMS3	100	85.479	Ailuropoda_melanoleuca
ENSMZEG00005026469	-	85	71.768	ENSACIG00000021113	RBMS3	95	74.795	Amphilophus_citrinellus
ENSMZEG00005026469	-	74	95.758	ENSACIG00000006987	-	90	95.758	Amphilophus_citrinellus
ENSMZEG00005026469	-	96	79.773	ENSAOCG00000021274	rbms3	100	79.318	Amphiprion_ocellaris
ENSMZEG00005026469	-	100	94.318	ENSAOCG00000024104	-	100	94.129	Amphiprion_ocellaris
ENSMZEG00005026469	-	79	80.716	ENSAPEG00000016299	rbms3	87	86.446	Amphiprion_percula
ENSMZEG00005026469	-	96	88.263	ENSAPEG00000009481	-	100	88.263	Amphiprion_percula
ENSMZEG00005026469	-	96	80.137	ENSATEG00000024295	rbms3	100	80.137	Anabas_testudineus
ENSMZEG00005026469	-	96	96.019	ENSATEG00000008433	-	100	96.019	Anabas_testudineus
ENSMZEG00005026469	-	95	85.880	ENSAPLG00000012270	RBMS3	99	84.884	Anas_platyrhynchos
ENSMZEG00005026469	-	96	85.219	ENSACAG00000028664	RBMS3	99	84.527	Anolis_carolinensis
ENSMZEG00005026469	-	96	86.136	ENSANAG00000021899	RBMS3	100	86.041	Aotus_nancymaae
ENSMZEG00005026469	-	96	79.405	ENSACLG00000018506	rbms3	100	79.405	Astatotilapia_calliptera
ENSMZEG00005026469	-	100	100.000	ENSACLG00000008976	-	100	100.000	Astatotilapia_calliptera
ENSMZEG00005026469	-	96	87.850	ENSAMXG00000020388	rbms3	100	87.850	Astyanax_mexicanus
ENSMZEG00005026469	-	58	87.597	ENSAMXG00000043770	-	100	87.597	Astyanax_mexicanus
ENSMZEG00005026469	-	96	86.105	ENSBTAG00000044062	RBMS3	100	86.009	Bos_taurus
ENSMZEG00005026469	-	96	86.136	ENSCJAG00000004312	RBMS3	100	86.041	Callithrix_jacchus
ENSMZEG00005026469	-	96	86.136	ENSCAFG00000005464	RBMS3	100	86.041	Canis_familiaris
ENSMZEG00005026469	-	96	86.105	ENSCAFG00020024980	RBMS3	100	86.009	Canis_lupus_dingo
ENSMZEG00005026469	-	96	86.136	ENSCHIG00000009144	RBMS3	100	86.041	Capra_hircus
ENSMZEG00005026469	-	74	86.350	ENSTSYG00000002615	RBMS3	100	86.228	Carlito_syrichta
ENSMZEG00005026469	-	84	81.365	ENSCAPG00000017783	RBMS3	95	82.842	Cavia_aperea
ENSMZEG00005026469	-	96	86.437	ENSCPOG00000006457	RBMS3	100	86.343	Cavia_porcellus
ENSMZEG00005026469	-	96	86.136	ENSCCAG00000008671	RBMS3	100	86.041	Cebus_capucinus
ENSMZEG00005026469	-	96	85.682	ENSCATG00000013222	RBMS3	100	85.584	Cercocebus_atys
ENSMZEG00005026469	-	96	85.682	ENSCLAG00000005866	RBMS3	100	85.584	Chinchilla_lanigera
ENSMZEG00005026469	-	64	84.211	ENSCSAG00000009655	RBMS3	99	88.148	Chlorocebus_sabaeus
ENSMZEG00005026469	-	84	88.000	ENSCHOG00000000758	RBMS3	87	88.000	Choloepus_hoffmanni
ENSMZEG00005026469	-	96	85.450	ENSCPBG00000022678	RBMS3	99	84.758	Chrysemys_picta_bellii
ENSMZEG00005026469	-	96	85.909	ENSCANG00000032137	RBMS3	100	85.812	Colobus_angolensis_palliatus
ENSMZEG00005026469	-	96	84.368	ENSCGRG00001007243	Rbms3	100	84.259	Cricetulus_griseus_chok1gshd
ENSMZEG00005026469	-	96	84.368	ENSCGRG00000004599	Rbms3	100	84.259	Cricetulus_griseus_crigri
ENSMZEG00005026469	-	96	94.159	ENSCSEG00000014677	-	94	100.000	Cynoglossus_semilaevis
ENSMZEG00005026469	-	96	79.271	ENSCSEG00000010011	RBMS3	100	79.271	Cynoglossus_semilaevis
ENSMZEG00005026469	-	96	80.645	ENSCVAG00000022354	rbms3	100	80.645	Cyprinodon_variegatus
ENSMZEG00005026469	-	96	95.561	ENSCVAG00000022814	-	100	98.433	Cyprinodon_variegatus
ENSMZEG00005026469	-	96	87.383	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSMZEG00005026469	-	96	85.682	ENSDNOG00000016645	RBMS3	100	85.584	Dasypus_novemcinctus
ENSMZEG00005026469	-	96	85.000	ENSDORG00000007220	Rbms3	100	84.897	Dipodomys_ordii
ENSMZEG00005026469	-	83	83.333	ENSETEG00000009485	-	80	70.571	Echinops_telfairi
ENSMZEG00005026469	-	62	54.317	ENSEBUG00000005830	rbms3	86	55.472	Eptatretus_burgeri
ENSMZEG00005026469	-	96	85.747	ENSEASG00005006152	RBMS3	100	85.057	Equus_asinus_asinus
ENSMZEG00005026469	-	96	85.909	ENSECAG00000017871	RBMS3	100	85.812	Equus_caballus
ENSMZEG00005026469	-	86	80.808	ENSEEUG00000014337	RBMS3	100	80.662	Erinaceus_europaeus
ENSMZEG00005026469	-	96	77.803	ENSELUG00000002862	rbms3	100	77.117	Esox_lucius
ENSMZEG00005026469	-	88	92.857	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSMZEG00005026469	-	96	85.682	ENSFCAG00000002130	RBMS3	100	85.584	Felis_catus
ENSMZEG00005026469	-	96	85.681	ENSFALG00000009165	RBMS3	99	84.988	Ficedula_albicollis
ENSMZEG00005026469	-	96	85.227	ENSFDAG00000008278	RBMS3	100	85.126	Fukomys_damarensis
ENSMZEG00005026469	-	92	67.303	ENSFHEG00000004787	RBMS3	94	75.749	Fundulus_heteroclitus
ENSMZEG00005026469	-	86	88.917	ENSGMOG00000002600	-	96	88.917	Gadus_morhua
ENSMZEG00005026469	-	96	85.681	ENSGALG00000011439	RBMS3	99	84.988	Gallus_gallus
ENSMZEG00005026469	-	96	80.230	ENSGAFG00000000168	rbms3	100	80.230	Gambusia_affinis
ENSMZEG00005026469	-	96	95.794	ENSGAFG00000003329	-	100	95.794	Gambusia_affinis
ENSMZEG00005026469	-	64	83.158	ENSGAGG00000004039	RBMS3	99	87.085	Gopherus_agassizii
ENSMZEG00005026469	-	96	86.136	ENSGGOG00000007228	RBMS3	100	86.041	Gorilla_gorilla
ENSMZEG00005026469	-	59	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSMZEG00005026469	-	100	99.810	ENSHBUG00000019785	-	100	99.810	Haplochromis_burtoni
ENSMZEG00005026469	-	96	85.682	ENSHGLG00000002170	RBMS3	100	85.584	Heterocephalus_glaber_female
ENSMZEG00005026469	-	96	85.682	ENSHGLG00100014278	RBMS3	100	85.584	Heterocephalus_glaber_male
ENSMZEG00005026469	-	96	94.159	ENSHCOG00000007894	-	98	96.939	Hippocampus_comes
ENSMZEG00005026469	-	96	87.850	ENSIPUG00000017680	rbms3	100	87.850	Ictalurus_punctatus
ENSMZEG00005026469	-	96	86.136	ENSSTOG00000006324	RBMS3	100	86.041	Ictidomys_tridecemlineatus
ENSMZEG00005026469	-	96	82.273	ENSJJAG00000014708	Rbms3	100	82.380	Jaculus_jaculus
ENSMZEG00005026469	-	100	92.235	ENSKMAG00000012586	-	100	95.550	Kryptolebias_marmoratus
ENSMZEG00005026469	-	96	78.685	ENSKMAG00000020500	rbms3	100	78.685	Kryptolebias_marmoratus
ENSMZEG00005026469	-	96	94.614	ENSLBEG00000027388	-	98	97.067	Labrus_bergylta
ENSMZEG00005026469	-	59	71.273	ENSLBEG00000006677	rbms3	97	74.242	Labrus_bergylta
ENSMZEG00005026469	-	96	87.500	ENSLACG00000010581	RBMS3	100	86.806	Latimeria_chalumnae
ENSMZEG00005026469	-	68	87.129	ENSLOCG00000002328	rbms3	99	91.003	Lepisosteus_oculatus
ENSMZEG00005026469	-	96	85.877	ENSLAFG00000000354	RBMS3	100	85.780	Loxodonta_africana
ENSMZEG00005026469	-	96	85.909	ENSMFAG00000033300	RBMS3	100	85.812	Macaca_fascicularis
ENSMZEG00005026469	-	96	85.747	ENSMMUG00000004404	RBMS3	100	85.057	Macaca_mulatta
ENSMZEG00005026469	-	96	85.909	ENSMNEG00000035839	RBMS3	100	85.812	Macaca_nemestrina
ENSMZEG00005026469	-	96	85.682	ENSMLEG00000029464	RBMS3	100	85.584	Mandrillus_leucophaeus
ENSMZEG00005026469	-	96	80.410	ENSMAMG00000024043	rbms3	100	81.093	Mastacembelus_armatus
ENSMZEG00005026469	-	100	91.098	ENSMAMG00000002176	-	100	98.210	Mastacembelus_armatus
ENSMZEG00005026469	-	96	79.405	ENSMZEG00005006308	rbms3	100	79.405	Maylandia_zebra
ENSMZEG00005026469	-	96	84.368	ENSMAUG00000016436	Rbms3	100	84.259	Mesocricetus_auratus
ENSMZEG00005026469	-	96	86.364	ENSMICG00000049249	RBMS3	100	86.270	Microcebus_murinus
ENSMZEG00005026469	-	96	84.138	ENSMOCG00000006997	Rbms3	100	84.028	Microtus_ochrogaster
ENSMZEG00005026469	-	79	81.163	ENSMMOG00000008471	RBMS3	89	87.234	Mola_mola
ENSMZEG00005026469	-	96	94.145	ENSMMOG00000015071	-	100	94.145	Mola_mola
ENSMZEG00005026469	-	96	80.044	ENSMODG00000015125	RBMS3	99	79.241	Monodelphis_domestica
ENSMZEG00005026469	-	96	95.316	ENSMALG00000009155	-	100	95.316	Monopterus_albus
ENSMZEG00005026469	-	96	79.954	ENSMALG00000019536	RBMS3	100	77.854	Monopterus_albus
ENSMZEG00005026469	-	96	83.448	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSMZEG00005026469	-	96	84.138	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSMZEG00005026469	-	96	83.945	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSMZEG00005026469	-	96	84.138	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSMZEG00005026469	-	96	86.105	ENSMPUG00000011956	RBMS3	100	86.009	Mustela_putorius_furo
ENSMZEG00005026469	-	96	85.714	ENSMLUG00000000659	RBMS3	100	85.023	Myotis_lucifugus
ENSMZEG00005026469	-	96	85.977	ENSNGAG00000014039	Rbms3	100	85.681	Nannospalax_galili
ENSMZEG00005026469	-	96	96.948	ENSNBRG00000018065	-	100	96.948	Neolamprologus_brichardi
ENSMZEG00005026469	-	96	86.136	ENSNLEG00000004129	RBMS3	100	86.041	Nomascus_leucogenys
ENSMZEG00005026469	-	95	78.032	ENSMEUG00000004772	RBMS3	99	77.880	Notamacropus_eugenii
ENSMZEG00005026469	-	95	86.374	ENSOPRG00000006808	RBMS3	85	86.374	Ochotona_princeps
ENSMZEG00005026469	-	96	86.136	ENSODEG00000003651	RBMS3	100	86.041	Octodon_degus
ENSMZEG00005026469	-	96	74.654	ENSONIG00000007172	rbms3	100	74.654	Oreochromis_niloticus
ENSMZEG00005026469	-	96	85.194	ENSOANG00000010529	RBMS3	99	85.550	Ornithorhynchus_anatinus
ENSMZEG00005026469	-	96	85.455	ENSOCUG00000004840	RBMS3	100	85.355	Oryctolagus_cuniculus
ENSMZEG00005026469	-	96	94.614	ENSORLG00000002306	-	100	94.614	Oryzias_latipes
ENSMZEG00005026469	-	96	78.851	ENSORLG00000005370	RBMS3	100	78.621	Oryzias_latipes
ENSMZEG00005026469	-	96	94.848	ENSORLG00020008496	-	100	94.848	Oryzias_latipes_hni
ENSMZEG00005026469	-	96	78.621	ENSORLG00020022674	RBMS3	100	78.391	Oryzias_latipes_hni
ENSMZEG00005026469	-	96	79.080	ENSORLG00015005509	rbms3	100	78.851	Oryzias_latipes_hsok
ENSMZEG00005026469	-	96	94.848	ENSORLG00015015719	-	100	94.848	Oryzias_latipes_hsok
ENSMZEG00005026469	-	96	79.540	ENSOMEG00000014805	RBMS3	100	79.310	Oryzias_melastigma
ENSMZEG00005026469	-	93	92.736	ENSOMEG00000007677	-	100	97.120	Oryzias_melastigma
ENSMZEG00005026469	-	96	85.682	ENSOARG00000014684	RBMS3	100	85.584	Ovis_aries
ENSMZEG00005026469	-	96	86.136	ENSPPAG00000036519	RBMS3	100	86.041	Pan_paniscus
ENSMZEG00005026469	-	96	85.455	ENSPPRG00000002761	RBMS3	100	85.355	Panthera_pardus
ENSMZEG00005026469	-	96	85.455	ENSPTIG00000011568	RBMS3	100	85.355	Panthera_tigris_altaica
ENSMZEG00005026469	-	96	86.136	ENSPTRG00000014709	RBMS3	100	86.041	Pan_troglodytes
ENSMZEG00005026469	-	96	85.682	ENSPANG00000010234	RBMS3	100	82.327	Papio_anubis
ENSMZEG00005026469	-	58	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSMZEG00005026469	-	96	84.988	ENSPSIG00000005269	RBMS3	99	84.296	Pelodiscus_sinensis
ENSMZEG00005026469	-	79	80.780	ENSPMGG00000021544	rbms3	86	85.542	Periophthalmus_magnuspinnatus
ENSMZEG00005026469	-	88	94.911	ENSPMGG00000021683	-	100	97.906	Periophthalmus_magnuspinnatus
ENSMZEG00005026469	-	95	81.860	ENSPEMG00000001117	Rbms3	99	81.733	Peromyscus_maniculatus_bairdii
ENSMZEG00005026469	-	77	89.459	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSMZEG00005026469	-	96	80.690	ENSPFOG00000017887	rbms3	100	80.690	Poecilia_formosa
ENSMZEG00005026469	-	75	78.209	ENSPLAG00000016866	-	82	81.308	Poecilia_latipinna
ENSMZEG00005026469	-	96	95.794	ENSPMEG00000002993	-	100	95.794	Poecilia_mexicana
ENSMZEG00005026469	-	96	78.984	ENSPREG00000011880	rbms3	100	78.984	Poecilia_reticulata
ENSMZEG00005026469	-	100	89.225	ENSPREG00000018221	-	97	97.222	Poecilia_reticulata
ENSMZEG00005026469	-	96	73.182	ENSPPYG00000014050	RBMS3	83	72.998	Pongo_abelii
ENSMZEG00005026469	-	96	65.909	ENSPCAG00000006307	RBMS3	100	65.675	Procavia_capensis
ENSMZEG00005026469	-	95	86.697	ENSPCOG00000017136	RBMS3	99	86.605	Propithecus_coquereli
ENSMZEG00005026469	-	86	88.000	ENSPVAG00000014037	RBMS3	100	76.888	Pteropus_vampyrus
ENSMZEG00005026469	-	94	100.000	ENSPNYG00000012624	-	100	100.000	Pundamilia_nyererei
ENSMZEG00005026469	-	96	79.176	ENSPNYG00000010546	rbms3	100	79.176	Pundamilia_nyererei
ENSMZEG00005026469	-	96	87.850	ENSPNAG00000001800	rbms3	100	87.850	Pygocentrus_nattereri
ENSMZEG00005026469	-	96	84.332	ENSRNOG00000025881	Rbms3	100	84.223	Rattus_norvegicus
ENSMZEG00005026469	-	96	85.682	ENSRBIG00000035863	RBMS3	100	85.584	Rhinopithecus_bieti
ENSMZEG00005026469	-	85	87.306	ENSRROG00000027512	RBMS3	95	86.154	Rhinopithecus_roxellana
ENSMZEG00005026469	-	96	86.136	ENSSBOG00000020232	RBMS3	100	86.041	Saimiri_boliviensis_boliviensis
ENSMZEG00005026469	-	85	80.000	ENSSHAG00000002411	RBMS3	95	81.720	Sarcophilus_harrisii
ENSMZEG00005026469	-	96	91.803	ENSSFOG00015008578	rbms3	98	94.133	Scleropages_formosus
ENSMZEG00005026469	-	93	90.799	ENSSMAG00000020065	-	97	92.935	Scophthalmus_maximus
ENSMZEG00005026469	-	96	76.818	ENSSMAG00000004997	rbms3	99	83.333	Scophthalmus_maximus
ENSMZEG00005026469	-	96	80.182	ENSSDUG00000013656	RBMS3	100	80.182	Seriola_dumerili
ENSMZEG00005026469	-	100	93.561	ENSSDUG00000019287	-	100	96.253	Seriola_dumerili
ENSMZEG00005026469	-	96	79.864	ENSSLDG00000020276	RBMS3	100	79.864	Seriola_lalandi_dorsalis
ENSMZEG00005026469	-	100	93.371	ENSSLDG00000013224	-	100	96.253	Seriola_lalandi_dorsalis
ENSMZEG00005026469	-	75	76.608	ENSSARG00000000695	RBMS3	94	75.434	Sorex_araneus
ENSMZEG00005026469	-	67	84.053	ENSSPUG00000017197	RBMS3	97	85.185	Sphenodon_punctatus
ENSMZEG00005026469	-	100	93.019	ENSSPAG00000003983	-	100	93.774	Stegastes_partitus
ENSMZEG00005026469	-	96	79.545	ENSSPAG00000020693	rbms3	100	79.545	Stegastes_partitus
ENSMZEG00005026469	-	96	85.682	ENSSSCG00000036381	RBMS3	100	85.584	Sus_scrofa
ENSMZEG00005026469	-	74	84.524	ENSTGUG00000003572	RBMS3	100	84.685	Taeniopygia_guttata
ENSMZEG00005026469	-	96	83.333	ENSTRUG00000007482	-	100	83.178	Takifugu_rubripes
ENSMZEG00005026469	-	96	78.360	ENSTRUG00000021719	RBMS3	100	77.904	Takifugu_rubripes
ENSMZEG00005026469	-	75	88.304	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSMZEG00005026469	-	95	85.780	ENSTTRG00000006202	RBMS3	99	85.681	Tursiops_truncatus
ENSMZEG00005026469	-	96	86.136	ENSUMAG00000000263	RBMS3	100	86.041	Ursus_maritimus
ENSMZEG00005026469	-	85	77.461	ENSVPAG00000003842	RBMS3	95	76.410	Vicugna_pacos
ENSMZEG00005026469	-	85	87.792	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSMZEG00005026469	-	68	81.935	ENSXETG00000032055	RBMS3	99	81.107	Xenopus_tropicalis
ENSMZEG00005026469	-	88	81.679	ENSXCOG00000019600	-	100	82.776	Xiphophorus_couchianus
ENSMZEG00005026469	-	96	78.440	ENSXMAG00000021783	rbms3	100	78.440	Xiphophorus_maculatus
ENSMZEG00005026469	-	96	96.028	ENSXMAG00000014382	-	100	96.028	Xiphophorus_maculatus