EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026470 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 1134 bases
Position: chrLG20:22395319-22396452
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035419	zf-C2H2	PF00096.26	6.4e-34	1	6
ENSMZEP00005035419	zf-C2H2	PF00096.26	6.4e-34	2	6
ENSMZEP00005035419	zf-C2H2	PF00096.26	6.4e-34	3	6
ENSMZEP00005035419	zf-C2H2	PF00096.26	6.4e-34	4	6
ENSMZEP00005035419	zf-C2H2	PF00096.26	6.4e-34	5	6
ENSMZEP00005035419	zf-C2H2	PF00096.26	6.4e-34	6	6
ENSMZEP00005035419	zf-met	PF12874.7	5.5e-17	1	3
ENSMZEP00005035419	zf-met	PF12874.7	5.5e-17	2	3
ENSMZEP00005035419	zf-met	PF12874.7	5.5e-17	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036670	-	1134	-	ENSMZEP00005035419	377 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005026470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026470	-	57	45.161	ENSACIG00000007882	-	76	45.161	Amphilophus_citrinellus
ENSMZEG00005026470	-	56	44.138	ENSACIG00000008886	znf1164	85	44.138	Amphilophus_citrinellus
ENSMZEG00005026470	-	83	64.242	ENSACIG00000000360	si:ch211-241b2.1	99	64.242	Amphilophus_citrinellus
ENSMZEG00005026470	-	55	35.754	ENSAOCG00000021565	-	84	35.135	Amphiprion_ocellaris
ENSMZEG00005026470	-	83	50.575	ENSATEG00000008683	si:ch211-241b2.1	91	50.575	Anabas_testudineus
ENSMZEG00005026470	-	90	47.899	ENSATEG00000008667	-	72	47.899	Anabas_testudineus
ENSMZEG00005026470	-	55	41.096	ENSACLG00000017449	-	58	41.096	Astatotilapia_calliptera
ENSMZEG00005026470	-	87	57.037	ENSACLG00000024670	-	98	61.702	Astatotilapia_calliptera
ENSMZEG00005026470	-	54	43.678	ENSACLG00000000521	-	95	43.678	Astatotilapia_calliptera
ENSMZEG00005026470	-	58	56.977	ENSAMXG00000041650	-	85	56.977	Astyanax_mexicanus
ENSMZEG00005026470	-	56	53.226	ENSAMXG00000043291	-	66	53.226	Astyanax_mexicanus
ENSMZEG00005026470	-	79	38.202	ENSCSEG00000015585	-	94	38.202	Cynoglossus_semilaevis
ENSMZEG00005026470	-	58	55.682	ENSDARG00000098248	CABZ01081730.1	90	55.682	Danio_rerio
ENSMZEG00005026470	-	53	55.729	ENSDARG00000113011	zgc:113102	99	53.425	Danio_rerio
ENSMZEG00005026470	-	63	51.980	ENSDARG00000105074	BX000701.2	92	51.980	Danio_rerio
ENSMZEG00005026470	-	60	53.371	ENSDARG00000103777	znf1001	98	53.371	Danio_rerio
ENSMZEG00005026470	-	57	47.619	ENSDARG00000092605	znf1003	94	47.468	Danio_rerio
ENSMZEG00005026470	-	62	50.515	ENSDARG00000102401	znf1001	93	50.515	Danio_rerio
ENSMZEG00005026470	-	62	50.515	ENSDARG00000115857	znf1001	95	50.515	Danio_rerio
ENSMZEG00005026470	-	58	55.682	ENSDARG00000100803	zgc:173517	90	55.682	Danio_rerio
ENSMZEG00005026470	-	62	53.555	ENSDARG00000099731	CABZ01066719.1	96	53.555	Danio_rerio
ENSMZEG00005026470	-	62	48.744	ENSDARG00000111614	znf1183	97	48.744	Danio_rerio
ENSMZEG00005026470	-	57	54.688	ENSDARG00000109703	FO834825.1	81	54.688	Danio_rerio
ENSMZEG00005026470	-	65	53.465	ENSDARG00000105056	znf45l	97	53.465	Danio_rerio
ENSMZEG00005026470	-	58	54.335	ENSDARG00000099890	CU207221.2	96	54.335	Danio_rerio
ENSMZEG00005026470	-	59	55.294	ENSDARG00000078814	si:dkey-34m19.3	84	55.294	Danio_rerio
ENSMZEG00005026470	-	62	49.074	ENSDARG00000094736	znf1157	93	48.969	Danio_rerio
ENSMZEG00005026470	-	58	49.000	ENSDARG00000116765	zgc:162962	80	49.000	Danio_rerio
ENSMZEG00005026470	-	58	53.299	ENSDARG00000103530	zgc:113102	95	53.299	Danio_rerio
ENSMZEG00005026470	-	61	52.941	ENSDARG00000097521	si:dkey-111k8.5	91	52.941	Danio_rerio
ENSMZEG00005026470	-	56	50.000	ENSDARG00000088507	znf982	91	48.095	Danio_rerio
ENSMZEG00005026470	-	66	52.976	ENSDARG00000053165	zgc:113377	99	52.976	Danio_rerio
ENSMZEG00005026470	-	70	47.712	ENSDARG00000111899	zgc:171435	90	47.712	Danio_rerio
ENSMZEG00005026470	-	58	43.182	ENSEBUG00000015073	-	93	45.789	Eptatretus_burgeri
ENSMZEG00005026470	-	93	45.946	ENSELUG00000008131	-	90	45.946	Esox_lucius
ENSMZEG00005026470	-	83	48.125	ENSFHEG00000014023	-	96	38.129	Fundulus_heteroclitus
ENSMZEG00005026470	-	84	45.856	ENSFHEG00000013152	-	88	45.856	Fundulus_heteroclitus
ENSMZEG00005026470	-	81	43.529	ENSFHEG00000018209	-	99	44.311	Fundulus_heteroclitus
ENSMZEG00005026470	-	83	46.721	ENSHBUG00000009953	-	91	46.721	Haplochromis_burtoni
ENSMZEG00005026470	-	95	70.807	ENSHBUG00000018916	-	89	73.054	Haplochromis_burtoni
ENSMZEG00005026470	-	84	43.662	ENSKMAG00000009563	-	73	53.968	Kryptolebias_marmoratus
ENSMZEG00005026470	-	88	43.878	ENSKMAG00000014629	-	98	43.878	Kryptolebias_marmoratus
ENSMZEG00005026470	-	90	38.393	ENSLBEG00000028628	znf1174	72	38.393	Labrus_bergylta
ENSMZEG00005026470	-	82	50.000	ENSLBEG00000020461	-	90	50.000	Labrus_bergylta
ENSMZEG00005026470	-	68	42.143	ENSLBEG00000022939	-	58	42.143	Labrus_bergylta
ENSMZEG00005026470	-	88	47.305	ENSMAMG00000014743	-	76	47.305	Mastacembelus_armatus
ENSMZEG00005026470	-	80	53.960	ENSMZEG00005025729	-	95	53.960	Maylandia_zebra
ENSMZEG00005026470	-	56	50.000	ENSMZEG00005021426	-	78	50.000	Maylandia_zebra
ENSMZEG00005026470	-	78	59.036	ENSMZEG00005027943	-	96	59.036	Maylandia_zebra
ENSMZEG00005026470	-	57	40.000	ENSMZEG00005022161	-	92	40.000	Maylandia_zebra
ENSMZEG00005026470	-	80	90.698	ENSMZEG00005027793	-	97	90.698	Maylandia_zebra
ENSMZEG00005026470	-	76	72.792	ENSMZEG00005007426	-	79	72.792	Maylandia_zebra
ENSMZEG00005026470	-	54	37.640	ENSMZEG00005025568	-	80	37.640	Maylandia_zebra
ENSMZEG00005026470	-	55	45.690	ENSMZEG00005005162	-	74	41.975	Maylandia_zebra
ENSMZEG00005026470	-	73	41.573	ENSMALG00000008638	-	71	41.573	Monopterus_albus
ENSMZEG00005026470	-	85	47.368	ENSMALG00000018074	-	91	47.368	Monopterus_albus
ENSMZEG00005026470	-	85	60.000	ENSNBRG00000000577	-	98	60.000	Neolamprologus_brichardi
ENSMZEG00005026470	-	60	43.624	ENSONIG00000006585	-	95	49.020	Oreochromis_niloticus
ENSMZEG00005026470	-	70	45.652	ENSONIG00000013908	-	100	45.652	Oreochromis_niloticus
ENSMZEG00005026470	-	55	44.295	ENSONIG00000003363	-	99	44.295	Oreochromis_niloticus
ENSMZEG00005026470	-	55	57.627	ENSORLG00020019341	-	75	59.524	Oryzias_latipes_hni
ENSMZEG00005026470	-	54	38.690	ENSPKIG00000020324	-	56	37.143	Paramormyrops_kingsleyae
ENSMZEG00005026470	-	58	44.138	ENSPKIG00000018633	-	50	44.138	Paramormyrops_kingsleyae
ENSMZEG00005026470	-	55	36.806	ENSPMGG00000001558	znf1174	62	36.806	Periophthalmus_magnuspinnatus
ENSMZEG00005026470	-	54	42.188	ENSPFOG00000011766	-	97	42.188	Poecilia_formosa
ENSMZEG00005026470	-	58	47.549	ENSPFOG00000001144	-	100	47.549	Poecilia_formosa
ENSMZEG00005026470	-	88	42.211	ENSPLAG00000016561	zgc:113348	93	45.078	Poecilia_latipinna
ENSMZEG00005026470	-	57	43.262	ENSPMEG00000007573	zgc:113343	96	43.262	Poecilia_mexicana
ENSMZEG00005026470	-	58	42.683	ENSPREG00000005538	-	71	42.683	Poecilia_reticulata
ENSMZEG00005026470	-	90	43.262	ENSPREG00000001514	zgc:113343	96	43.262	Poecilia_reticulata
ENSMZEG00005026470	-	56	47.143	ENSPREG00000014105	-	81	47.143	Poecilia_reticulata
ENSMZEG00005026470	-	55	39.456	ENSPNYG00000024183	zgc:173577	98	39.456	Pundamilia_nyererei
ENSMZEG00005026470	-	81	60.000	ENSSDUG00000008682	-	97	60.000	Seriola_dumerili
ENSMZEG00005026470	-	74	45.098	ENSSPAG00000013109	si:ch211-241b2.1	89	48.023	Stegastes_partitus
ENSMZEG00005026470	-	60	38.012	ENSSPAG00000009426	-	61	38.012	Stegastes_partitus
ENSMZEG00005026470	-	54	45.455	ENSSPAG00000006539	-	93	45.455	Stegastes_partitus
ENSMZEG00005026470	-	54	47.586	ENSTNIG00000000277	-	93	47.586	Tetraodon_nigroviridis
ENSMZEG00005026470	-	79	43.972	ENSXCOG00000017871	zgc:113343	96	43.972	Xiphophorus_couchianus
ENSMZEG00005026470	-	58	43.972	ENSXMAG00000019923	zgc:113343	51	43.972	Xiphophorus_maculatus