EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026539 (Gene tree)
Gene ID: 101474930
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: pre-mRNA-processing factor 6
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 15273 bases
Position: chrLG20:23406110-23421382
Accession: 101474930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035524	PRP1_N	PF06424.12	1.1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036780	-	2628	XM_004545985	ENSMZEP00005035524	875 (aa)	XP_004546042	-

Gene Model

Click here to download ENSMZEG00005026539's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026539	prpf6	100	91.837	ENSG00000101161	PRPF6	94	91.383	Homo_sapiens
ENSMZEG00005026539	prpf6	100	98.057	ENSAPOG00000010395	prpf6	90	98.057	Acanthochromis_polyacanthus
ENSMZEG00005026539	prpf6	98	92.610	ENSAMEG00000001916	PRPF6	91	92.610	Ailuropoda_melanoleuca
ENSMZEG00005026539	prpf6	100	98.743	ENSACIG00000019862	prpf6	90	98.743	Amphilophus_citrinellus
ENSMZEG00005026539	prpf6	100	98.171	ENSAOCG00000012988	prpf6	90	98.171	Amphiprion_ocellaris
ENSMZEG00005026539	prpf6	100	90.743	ENSAPEG00000008301	prpf6	93	90.971	Amphiprion_percula
ENSMZEG00005026539	prpf6	100	97.943	ENSATEG00000005581	prpf6	90	97.943	Anabas_testudineus
ENSMZEG00005026539	prpf6	100	92.517	ENSACAG00000006464	PRPF6	89	92.063	Anolis_carolinensis
ENSMZEG00005026539	prpf6	100	91.837	ENSANAG00000012661	PRPF6	94	91.383	Aotus_nancymaae
ENSMZEG00005026539	prpf6	100	99.543	ENSACLG00000025875	prpf6	90	99.543	Astatotilapia_calliptera
ENSMZEG00005026539	prpf6	100	94.191	ENSAMXG00000001929	prpf6	90	94.191	Astyanax_mexicanus
ENSMZEG00005026539	prpf6	98	92.379	ENSBTAG00000011656	PRPF6	92	92.379	Bos_taurus
ENSMZEG00005026539	prpf6	100	91.837	ENSCJAG00000010616	PRPF6	94	91.383	Callithrix_jacchus
ENSMZEG00005026539	prpf6	98	92.494	ENSCAFG00000013165	PRPF6	92	92.494	Canis_familiaris
ENSMZEG00005026539	prpf6	98	92.494	ENSCAFG00020002050	PRPF6	92	92.494	Canis_lupus_dingo
ENSMZEG00005026539	prpf6	98	92.379	ENSCHIG00000018187	PRPF6	92	92.379	Capra_hircus
ENSMZEG00005026539	prpf6	100	92.290	ENSTSYG00000007814	PRPF6	94	91.837	Carlito_syrichta
ENSMZEG00005026539	prpf6	100	91.497	ENSCAPG00000015077	PRPF6	96	90.590	Cavia_aperea
ENSMZEG00005026539	prpf6	100	92.744	ENSCPOG00000007518	PRPF6	94	92.290	Cavia_porcellus
ENSMZEG00005026539	prpf6	100	88.549	ENSCCAG00000024564	PRPF6	94	88.209	Cebus_capucinus
ENSMZEG00005026539	prpf6	100	91.950	ENSCATG00000037473	PRPF6	93	92.820	Cercocebus_atys
ENSMZEG00005026539	prpf6	100	89.002	ENSCLAG00000003854	PRPF6	94	88.549	Chinchilla_lanigera
ENSMZEG00005026539	prpf6	100	87.162	ENSCSAG00000016742	PRPF6	94	86.712	Chlorocebus_sabaeus
ENSMZEG00005026539	prpf6	91	77.886	ENSCHOG00000003315	-	98	77.686	Choloepus_hoffmanni
ENSMZEG00005026539	prpf6	100	92.736	ENSCPBG00000013964	PRPF6	90	92.281	Chrysemys_picta_bellii
ENSMZEG00005026539	prpf6	99	71.864	ENSCING00000008817	-	91	72.248	Ciona_intestinalis
ENSMZEG00005026539	prpf6	100	91.723	ENSCANG00000038230	PRPF6	94	91.270	Colobus_angolensis_palliatus
ENSMZEG00005026539	prpf6	100	92.744	ENSCGRG00001022666	Prpf6	94	92.290	Cricetulus_griseus_chok1gshd
ENSMZEG00005026539	prpf6	100	91.429	ENSCSEG00000018561	prpf6	94	91.429	Cynoglossus_semilaevis
ENSMZEG00005026539	prpf6	100	97.257	ENSCVAG00000010550	prpf6	90	97.257	Cyprinodon_variegatus
ENSMZEG00005026539	prpf6	100	93.964	ENSDARG00000091367	prpf6	93	93.964	Danio_rerio
ENSMZEG00005026539	prpf6	100	91.837	ENSDNOG00000040544	PRPF6	94	91.497	Dasypus_novemcinctus
ENSMZEG00005026539	prpf6	97	92.290	ENSDORG00000005406	Prpf6	100	92.290	Dipodomys_ordii
ENSMZEG00005026539	prpf6	98	72.326	FBgn0036828	CG6841	91	72.229	Drosophila_melanogaster
ENSMZEG00005026539	prpf6	85	96.667	ENSETEG00000004447	PRPF6	78	91.520	Echinops_telfairi
ENSMZEG00005026539	prpf6	100	85.650	ENSEBUG00000008835	prpf6	94	85.198	Eptatretus_burgeri
ENSMZEG00005026539	prpf6	98	92.379	ENSEASG00005023115	PRPF6	92	92.379	Equus_asinus_asinus
ENSMZEG00005026539	prpf6	98	87.760	ENSECAG00000013983	PRPF6	92	87.760	Equus_caballus
ENSMZEG00005026539	prpf6	93	88.684	ENSEEUG00000000180	PRPF6	78	88.684	Erinaceus_europaeus
ENSMZEG00005026539	prpf6	100	95.205	ENSELUG00000001945	prpf6	87	95.205	Esox_lucius
ENSMZEG00005026539	prpf6	98	92.494	ENSFCAG00000001183	PRPF6	92	92.494	Felis_catus
ENSMZEG00005026539	prpf6	99	87.543	ENSFALG00000006046	-	89	87.644	Ficedula_albicollis
ENSMZEG00005026539	prpf6	100	92.630	ENSFALG00000010326	-	91	92.290	Ficedula_albicollis
ENSMZEG00005026539	prpf6	100	92.744	ENSFDAG00000006451	PRPF6	100	92.290	Fukomys_damarensis
ENSMZEG00005026539	prpf6	100	97.714	ENSFHEG00000000560	prpf6	90	97.714	Fundulus_heteroclitus
ENSMZEG00005026539	prpf6	100	93.729	ENSGMOG00000015622	prpf6	93	93.158	Gadus_morhua
ENSMZEG00005026539	prpf6	100	92.630	ENSGALG00000006001	PRPF6	94	92.290	Gallus_gallus
ENSMZEG00005026539	prpf6	100	92.800	ENSGAFG00000021109	prpf6	90	92.800	Gambusia_affinis
ENSMZEG00005026539	prpf6	100	95.553	ENSGACG00000002576	prpf6	93	95.553	Gasterosteus_aculeatus
ENSMZEG00005026539	prpf6	100	92.849	ENSGAGG00000008653	PRPF6	90	92.395	Gopherus_agassizii
ENSMZEG00005026539	prpf6	100	91.837	ENSGGOG00000016876	PRPF6	97	92.820	Gorilla_gorilla
ENSMZEG00005026539	prpf6	100	99.543	ENSHBUG00000004496	prpf6	90	99.543	Haplochromis_burtoni
ENSMZEG00005026539	prpf6	100	92.630	ENSHGLG00000009222	PRPF6	94	92.177	Heterocephalus_glaber_female
ENSMZEG00005026539	prpf6	100	92.630	ENSHGLG00100016600	PRPF6	96	92.177	Heterocephalus_glaber_male
ENSMZEG00005026539	prpf6	100	96.571	ENSHCOG00000011513	prpf6	90	96.571	Hippocampus_comes
ENSMZEG00005026539	prpf6	98	94.097	ENSIPUG00000004912	prpf6	89	94.097	Ictalurus_punctatus
ENSMZEG00005026539	prpf6	100	90.034	ENSSTOG00000002922	PRPF6	94	89.128	Ictidomys_tridecemlineatus
ENSMZEG00005026539	prpf6	100	92.744	ENSJJAG00000000836	Prpf6	94	92.290	Jaculus_jaculus
ENSMZEG00005026539	prpf6	100	97.943	ENSKMAG00000017800	prpf6	90	97.943	Kryptolebias_marmoratus
ENSMZEG00005026539	prpf6	100	96.571	ENSLBEG00000012582	prpf6	90	96.571	Labrus_bergylta
ENSMZEG00005026539	prpf6	100	94.098	ENSLOCG00000004827	prpf6	89	93.644	Lepisosteus_oculatus
ENSMZEG00005026539	prpf6	100	91.950	ENSLAFG00000005272	PRPF6	94	91.497	Loxodonta_africana
ENSMZEG00005026539	prpf6	100	91.723	ENSMFAG00000037542	PRPF6	97	92.820	Macaca_fascicularis
ENSMZEG00005026539	prpf6	97	93.934	ENSMMUG00000015558	PRPF6	98	93.241	Macaca_mulatta
ENSMZEG00005026539	prpf6	100	78.757	ENSMNEG00000045555	PRPF6	93	78.305	Macaca_nemestrina
ENSMZEG00005026539	prpf6	100	97.829	ENSMAMG00000010718	prpf6	90	97.829	Mastacembelus_armatus
ENSMZEG00005026539	prpf6	100	98.973	ENSMZEG00005015261	-	93	98.973	Maylandia_zebra
ENSMZEG00005026539	prpf6	100	92.857	ENSMGAG00000006634	PRPF6	96	92.517	Meleagris_gallopavo
ENSMZEG00005026539	prpf6	100	92.744	ENSMAUG00000013969	Prpf6	94	92.290	Mesocricetus_auratus
ENSMZEG00005026539	prpf6	93	91.727	ENSMICG00000017793	PRPF6	98	91.739	Microcebus_murinus
ENSMZEG00005026539	prpf6	100	92.630	ENSMOCG00000001701	Prpf6	94	92.177	Microtus_ochrogaster
ENSMZEG00005026539	prpf6	100	96.914	ENSMMOG00000020419	prpf6	94	96.914	Mola_mola
ENSMZEG00005026539	prpf6	97	93.351	ENSMODG00000017051	PRPF6	92	92.819	Monodelphis_domestica
ENSMZEG00005026539	prpf6	100	97.600	ENSMALG00000000089	prpf6	95	97.600	Monopterus_albus
ENSMZEG00005026539	prpf6	100	86.054	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSMZEG00005026539	prpf6	100	92.744	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSMZEG00005026539	prpf6	100	92.744	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSMZEG00005026539	prpf6	100	92.744	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSMZEG00005026539	prpf6	96	92.831	ENSMPUG00000008673	PRPF6	98	92.831	Mustela_putorius_furo
ENSMZEG00005026539	prpf6	100	92.857	ENSNGAG00000003365	Prpf6	94	92.404	Nannospalax_galili
ENSMZEG00005026539	prpf6	100	99.429	ENSNBRG00000015025	prpf6	90	99.429	Neolamprologus_brichardi
ENSMZEG00005026539	prpf6	100	91.723	ENSNLEG00000010208	PRPF6	97	92.091	Nomascus_leucogenys
ENSMZEG00005026539	prpf6	93	91.855	ENSMEUG00000009824	-	76	91.943	Notamacropus_eugenii
ENSMZEG00005026539	prpf6	100	86.395	ENSODEG00000004841	PRPF6	94	85.941	Octodon_degus
ENSMZEG00005026539	prpf6	100	99.086	ENSONIG00000017406	prpf6	90	99.086	Oreochromis_niloticus
ENSMZEG00005026539	prpf6	100	92.630	ENSOANG00000004920	PRPF6	94	92.177	Ornithorhynchus_anatinus
ENSMZEG00005026539	prpf6	100	90.930	ENSOCUG00000014151	PRPF6	95	90.476	Oryctolagus_cuniculus
ENSMZEG00005026539	prpf6	100	96.914	ENSORLG00000009592	prpf6	90	96.914	Oryzias_latipes
ENSMZEG00005026539	prpf6	100	97.029	ENSORLG00020001458	prpf6	90	97.029	Oryzias_latipes_hni
ENSMZEG00005026539	prpf6	100	97.029	ENSORLG00015018762	prpf6	90	97.029	Oryzias_latipes_hsok
ENSMZEG00005026539	prpf6	100	97.486	ENSOMEG00000012174	prpf6	90	97.486	Oryzias_melastigma
ENSMZEG00005026539	prpf6	100	84.824	ENSOGAG00000007573	PRPF6	94	84.598	Otolemur_garnettii
ENSMZEG00005026539	prpf6	98	92.379	ENSOARG00000008776	PRPF6	92	92.379	Ovis_aries
ENSMZEG00005026539	prpf6	100	91.837	ENSPPAG00000008686	PRPF6	97	92.820	Pan_paniscus
ENSMZEG00005026539	prpf6	98	92.494	ENSPPRG00000008497	PRPF6	92	92.494	Panthera_pardus
ENSMZEG00005026539	prpf6	98	92.494	ENSPTIG00000011184	PRPF6	92	92.494	Panthera_tigris_altaica
ENSMZEG00005026539	prpf6	100	91.837	ENSPTRG00000013765	PRPF6	97	92.820	Pan_troglodytes
ENSMZEG00005026539	prpf6	100	91.497	ENSPANG00000024135	PRPF6	94	91.043	Papio_anubis
ENSMZEG00005026539	prpf6	100	95.233	ENSPKIG00000005627	prpf6	92	94.779	Paramormyrops_kingsleyae
ENSMZEG00005026539	prpf6	100	92.630	ENSPSIG00000007717	PRPF6	100	92.177	Pelodiscus_sinensis
ENSMZEG00005026539	prpf6	100	95.434	ENSPMGG00000008925	prpf6	90	95.434	Periophthalmus_magnuspinnatus
ENSMZEG00005026539	prpf6	100	92.744	ENSPEMG00000016036	Prpf6	94	92.290	Peromyscus_maniculatus_bairdii
ENSMZEG00005026539	prpf6	100	87.670	ENSPMAG00000006144	prpf6	93	87.670	Petromyzon_marinus
ENSMZEG00005026539	prpf6	100	92.744	ENSPCIG00000017909	PRPF6	94	92.290	Phascolarctos_cinereus
ENSMZEG00005026539	prpf6	100	97.273	ENSPFOG00000006431	prpf6	90	97.273	Poecilia_formosa
ENSMZEG00005026539	prpf6	100	97.714	ENSPLAG00000005974	prpf6	90	97.714	Poecilia_latipinna
ENSMZEG00005026539	prpf6	100	98.057	ENSPMEG00000009977	prpf6	90	98.057	Poecilia_mexicana
ENSMZEG00005026539	prpf6	100	97.943	ENSPREG00000017993	prpf6	86	97.943	Poecilia_reticulata
ENSMZEG00005026539	prpf6	100	91.270	ENSPPYG00000011256	PRPF6	94	90.816	Pongo_abelii
ENSMZEG00005026539	prpf6	97	94.454	ENSPCAG00000006536	PRPF6	84	93.761	Procavia_capensis
ENSMZEG00005026539	prpf6	100	91.837	ENSPCOG00000016881	PRPF6	94	91.383	Propithecus_coquereli
ENSMZEG00005026539	prpf6	98	85.912	ENSPVAG00000014316	PRPF6	92	85.912	Pteropus_vampyrus
ENSMZEG00005026539	prpf6	100	80.251	ENSPNYG00000001939	prpf6	89	84.091	Pundamilia_nyererei
ENSMZEG00005026539	prpf6	100	94.989	ENSPNAG00000015606	prpf6	90	94.989	Pygocentrus_nattereri
ENSMZEG00005026539	prpf6	100	92.630	ENSRNOG00000051498	Prpf6	94	92.177	Rattus_norvegicus
ENSMZEG00005026539	prpf6	100	91.723	ENSRBIG00000043613	PRPF6	98	91.869	Rhinopithecus_bieti
ENSMZEG00005026539	prpf6	97	92.561	ENSRROG00000040969	PRPF6	98	91.869	Rhinopithecus_roxellana
ENSMZEG00005026539	prpf6	97	88.348	ENSSBOG00000020632	PRPF6	93	87.197	Saimiri_boliviensis_boliviensis
ENSMZEG00005026539	prpf6	100	92.744	ENSSHAG00000016810	PRPF6	94	92.290	Sarcophilus_harrisii
ENSMZEG00005026539	prpf6	100	95.233	ENSSFOG00015020859	prpf6	95	94.779	Scleropages_formosus
ENSMZEG00005026539	prpf6	100	96.571	ENSSMAG00000008112	prpf6	90	96.571	Scophthalmus_maximus
ENSMZEG00005026539	prpf6	100	98.057	ENSSDUG00000016142	prpf6	90	98.057	Seriola_dumerili
ENSMZEG00005026539	prpf6	100	98.057	ENSSLDG00000025283	prpf6	90	98.057	Seriola_lalandi_dorsalis
ENSMZEG00005026539	prpf6	100	91.827	ENSSPUG00000018260	PRPF6	100	91.373	Sphenodon_punctatus
ENSMZEG00005026539	prpf6	100	98.057	ENSSPAG00000015850	prpf6	90	98.057	Stegastes_partitus
ENSMZEG00005026539	prpf6	98	92.032	ENSSSCG00000029119	PRPF6	98	92.032	Sus_scrofa
ENSMZEG00005026539	prpf6	100	92.744	ENSTGUG00000007221	PRPF6	93	92.404	Taeniopygia_guttata
ENSMZEG00005026539	prpf6	100	97.143	ENSTRUG00000002920	prpf6	90	97.143	Takifugu_rubripes
ENSMZEG00005026539	prpf6	100	90.023	ENSTNIG00000017873	prpf6	94	90.023	Tetraodon_nigroviridis
ENSMZEG00005026539	prpf6	90	93.793	ENSTBEG00000005348	PRPF6	81	91.034	Tupaia_belangeri
ENSMZEG00005026539	prpf6	98	92.148	ENSTTRG00000013068	PRPF6	92	92.148	Tursiops_truncatus
ENSMZEG00005026539	prpf6	96	93.742	ENSUMAG00000021631	PRPF6	92	93.478	Ursus_maritimus
ENSMZEG00005026539	prpf6	98	92.494	ENSVVUG00000014948	PRPF6	92	92.494	Vulpes_vulpes
ENSMZEG00005026539	prpf6	100	91.827	ENSXETG00000012054	prpf6	91	91.373	Xenopus_tropicalis
ENSMZEG00005026539	prpf6	100	97.943	ENSXCOG00000008082	prpf6	90	97.943	Xiphophorus_couchianus
ENSMZEG00005026539	prpf6	100	97.943	ENSXMAG00000015581	prpf6	90	97.943	Xiphophorus_maculatus