EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026617 (Gene tree)
Gene ID: 101470643
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 13312 bases
Position: chrAGTA05000225.1:116860-130171
Accession: 101470643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035629	RRM_1	PF00076.22	7.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005036889	-	7617	XM_004538130	ENSMZEP00005035629	1809 (aa)	XP_004538187	UPI0003297050

Gene Model

Click here to download ENSMZEG00005026617's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026617	setd1ba	55	90.256	ENSAPOG00000014731	setd1ba	100	86.087	Acanthochromis_polyacanthus
ENSMZEG00005026617	setd1ba	100	84.387	ENSACIG00000016453	setd1ba	100	84.277	Amphilophus_citrinellus
ENSMZEG00005026617	setd1ba	97	86.308	ENSAOCG00000012148	setd1ba	99	85.690	Amphiprion_ocellaris
ENSMZEG00005026617	setd1ba	100	82.887	ENSAPEG00000010762	setd1ba	99	82.012	Amphiprion_percula
ENSMZEG00005026617	setd1ba	91	84.673	ENSATEG00000021563	setd1ba	99	84.318	Anabas_testudineus
ENSMZEG00005026617	setd1ba	88	58.865	ENSAPLG00000005217	SETD1B	85	58.456	Anas_platyrhynchos
ENSMZEG00005026617	setd1ba	100	100.000	ENSACLG00000016584	setd1ba	100	100.000	Astatotilapia_calliptera
ENSMZEG00005026617	setd1ba	50	71.557	ENSCHIG00000013406	SETD1B	89	53.130	Capra_hircus
ENSMZEG00005026617	setd1ba	63	78.788	ENSCLAG00000013200	SETD1B	80	65.939	Chinchilla_lanigera
ENSMZEG00005026617	setd1ba	59	68.874	ENSCGRG00000016965	-	63	68.730	Cricetulus_griseus_crigri
ENSMZEG00005026617	setd1ba	100	77.433	ENSCSEG00000001458	setd1ba	55	80.887	Cynoglossus_semilaevis
ENSMZEG00005026617	setd1ba	55	80.420	ENSCVAG00000022068	setd1ba	55	80.420	Cyprinodon_variegatus
ENSMZEG00005026617	setd1ba	52	82.663	ENSFALG00000009136	SETD1B	88	58.687	Ficedula_albicollis
ENSMZEG00005026617	setd1ba	52	90.476	ENSGMOG00000009831	setd1ba	59	90.476	Gadus_morhua
ENSMZEG00005026617	setd1ba	88	82.435	ENSGAFG00000008712	setd1ba	88	82.643	Gambusia_affinis
ENSMZEG00005026617	setd1ba	100	99.448	ENSHBUG00000019992	setd1ba	100	99.448	Haplochromis_burtoni
ENSMZEG00005026617	setd1ba	51	55.499	ENSSTOG00000012430	SETD1B	86	57.280	Ictidomys_tridecemlineatus
ENSMZEG00005026617	setd1ba	95	79.188	ENSKMAG00000007804	setd1ba	54	78.042	Kryptolebias_marmoratus
ENSMZEG00005026617	setd1ba	100	76.605	ENSLBEG00000020113	setd1ba	55	80.862	Labrus_bergylta
ENSMZEG00005026617	setd1ba	69	80.000	ENSLAFG00000026518	SETD1B	73	79.141	Loxodonta_africana
ENSMZEG00005026617	setd1ba	100	83.813	ENSMAMG00000011027	setd1ba	55	86.640	Mastacembelus_armatus
ENSMZEG00005026617	setd1ba	67	56.683	ENSMGAG00000004421	SETD1B	86	57.172	Meleagris_gallopavo
ENSMZEG00005026617	setd1ba	100	79.038	ENSMMOG00000008190	setd1ba	55	83.595	Mola_mola
ENSMZEG00005026617	setd1ba	100	82.628	ENSMALG00000005362	setd1ba	55	87.819	Monopterus_albus
ENSMZEG00005026617	setd1ba	100	95.971	ENSNBRG00000002915	setd1ba	99	95.971	Neolamprologus_brichardi
ENSMZEG00005026617	setd1ba	50	82.792	ENSODEG00000010155	SETD1B	80	56.731	Octodon_degus
ENSMZEG00005026617	setd1ba	100	97.681	ENSONIG00000013898	setd1ba	99	97.681	Oreochromis_niloticus
ENSMZEG00005026617	setd1ba	100	76.789	ENSORLG00000008435	setd1ba	55	81.219	Oryzias_latipes
ENSMZEG00005026617	setd1ba	100	77.171	ENSORLG00020017079	setd1ba	55	81.157	Oryzias_latipes_hni
ENSMZEG00005026617	setd1ba	66	77.659	ENSORLG00015004156	setd1ba	81	81.746	Oryzias_latipes_hsok
ENSMZEG00005026617	setd1ba	87	78.365	ENSPMGG00000011527	setd1ba	94	76.373	Periophthalmus_magnuspinnatus
ENSMZEG00005026617	setd1ba	50	80.317	ENSPCIG00000028605	SETD1B	87	57.928	Phascolarctos_cinereus
ENSMZEG00005026617	setd1ba	55	80.990	ENSPFOG00000019768	setd1ba	99	76.385	Poecilia_formosa
ENSMZEG00005026617	setd1ba	100	78.339	ENSPREG00000011589	setd1ba	100	78.339	Poecilia_reticulata
ENSMZEG00005026617	setd1ba	100	96.409	ENSPNYG00000009484	setd1ba	99	96.409	Pundamilia_nyererei
ENSMZEG00005026617	setd1ba	55	66.506	ENSPNAG00000016011	setd1ba	57	66.667	Pygocentrus_nattereri
ENSMZEG00005026617	setd1ba	100	86.670	ENSSPAG00000015470	setd1ba	56	89.173	Stegastes_partitus
ENSMZEG00005026617	setd1ba	70	80.488	ENSSSCG00000009806	SETD1B	90	59.897	Sus_scrofa
ENSMZEG00005026617	setd1ba	52	82.371	ENSTGUG00000006093	-	87	58.438	Taeniopygia_guttata
ENSMZEG00005026617	setd1ba	100	79.207	ENSTNIG00000009090	setd1ba	56	84.442	Tetraodon_nigroviridis
ENSMZEG00005026617	setd1ba	54	81.194	ENSXCOG00000004451	setd1ba	99	76.652	Xiphophorus_couchianus