EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMZEG00005026745 (Gene tree)
Gene ID
101471655
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Maylandia_zebra
Status
putative
Strand
Minus strand
Length
9534 bases
Position
chrLG22:15076565-15086098
Accession
101471655
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMZEP00005035817PABPPF00658.185.3e-3211
ENSMZEP00005035817RRM_5PF13893.64.4e-1012
ENSMZEP00005035817RRM_5PF13893.64.4e-1022
ENSMZEP00005035817RRM_1PF00076.225.7e-8914
ENSMZEP00005035817RRM_1PF00076.225.7e-8924
ENSMZEP00005035817RRM_1PF00076.225.7e-8934
ENSMZEP00005035817RRM_1PF00076.225.7e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMZET00005037081-5532XM_004549157ENSMZEP00005035817634 (aa)XP_004549214UPI000329FE9B
Gene Model
Click here to download ENSMZEG00005026745's gene model file
Pathways
Pathway IDPathway NameSource
mze03013RNA transportKEGG
mze03015mRNA surveillance pathwayKEGG
mze03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026745's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMZEG00005026745pabpc1b5878.061ENSG00000184388PABPC1L2B9878.061Homo_sapiens
ENSMZEG00005026745pabpc1b5878.061ENSG00000186288PABPC1L2A9878.061Homo_sapiens
ENSMZEG00005026745pabpc1b10096.845ENSAPOG00000017776pabpc1b10096.845Acanthochromis_polyacanthus
ENSMZEG00005026745pabpc1b10089.342ENSAPOG00000015105pabpc1a10089.185Acanthochromis_polyacanthus
ENSMZEG00005026745pabpc1b5978.061ENSAMEG00000019441-9878.061Ailuropoda_melanoleuca
ENSMZEG00005026745pabpc1b10089.342ENSACIG00000004685pabpc1a10089.342Amphilophus_citrinellus
ENSMZEG00005026745pabpc1b10091.654ENSACIG00000018366pabpc1b10091.654Amphilophus_citrinellus
ENSMZEG00005026745pabpc1b10096.057ENSAOCG00000019839pabpc1b10096.057Amphiprion_ocellaris
ENSMZEG00005026745pabpc1b10088.871ENSAOCG00000011656pabpc1a10089.028Amphiprion_ocellaris
ENSMZEG00005026745pabpc1b10088.871ENSAPEG00000006963pabpc1a10089.028Amphiprion_percula
ENSMZEG00005026745pabpc1b10096.057ENSAPEG00000010435pabpc1b10096.057Amphiprion_percula
ENSMZEG00005026745pabpc1b10089.185ENSATEG00000024852pabpc1a10089.342Anabas_testudineus
ENSMZEG00005026745pabpc1b10095.597ENSATEG00000012917pabpc1b10095.597Anabas_testudineus
ENSMZEG00005026745pabpc1b5878.061ENSANAG00000019431-9878.061Aotus_nancymaae
ENSMZEG00005026745pabpc1b5878.061ENSANAG00000019429-9878.061Aotus_nancymaae
ENSMZEG00005026745pabpc1b9993.510ENSACLG00000009399pabpc1a10093.510Astatotilapia_calliptera
ENSMZEG00005026745pabpc1b100100.000ENSACLG00000014335pabpc1b100100.000Astatotilapia_calliptera
ENSMZEG00005026745pabpc1b10093.543ENSAMXG00000008599pabpc1b10093.543Astyanax_mexicanus
ENSMZEG00005026745pabpc1b5977.073ENSBTAG00000050902-9877.073Bos_taurus
ENSMZEG00005026745pabpc1b5975.120ENSBTAG00000052491-9875.120Bos_taurus
ENSMZEG00005026745pabpc1b5878.061ENSCJAG00000041326-9878.061Callithrix_jacchus
ENSMZEG00005026745pabpc1b5977.073ENSCAFG00020002052-9877.073Canis_lupus_dingo
ENSMZEG00005026745pabpc1b5878.061ENSCHIG00000006283-9878.061Capra_hircus
ENSMZEG00005026745pabpc1b5878.061ENSCHIG00000011138-9878.061Capra_hircus
ENSMZEG00005026745pabpc1b5878.061ENSTSYG00000001775-9878.061Carlito_syrichta
ENSMZEG00005026745pabpc1b5978.061ENSCPOG00000009525-9878.061Cavia_porcellus
ENSMZEG00005026745pabpc1b5878.061ENSCCAG00000031524-9878.061Cebus_capucinus
ENSMZEG00005026745pabpc1b5878.061ENSCATG00000042826-9878.061Cercocebus_atys
ENSMZEG00005026745pabpc1b5878.061ENSCATG00000043125-9878.061Cercocebus_atys
ENSMZEG00005026745pabpc1b5877.041ENSCLAG00000017412-9877.041Chinchilla_lanigera
ENSMZEG00005026745pabpc1b5877.041ENSCLAG00000017409-9877.041Chinchilla_lanigera
ENSMZEG00005026745pabpc1b5978.061ENSCSAG00000000102-9878.061Chlorocebus_sabaeus
ENSMZEG00005026745pabpc1b5879.006ENSCGRG00001023387-9676.804Cricetulus_griseus_chok1gshd
ENSMZEG00005026745pabpc1b9989.683ENSCSEG00000013324pabpc1a9989.841Cynoglossus_semilaevis
ENSMZEG00005026745pabpc1b10090.694ENSCSEG00000015241-10090.694Cynoglossus_semilaevis
ENSMZEG00005026745pabpc1b10089.185ENSCVAG00000021872pabpc1a10088.871Cyprinodon_variegatus
ENSMZEG00005026745pabpc1b10092.598ENSCVAG00000005489pabpc1b10092.598Cyprinodon_variegatus
ENSMZEG00005026745pabpc1b10094.331ENSDARG00000021140pabpc1b10094.961Danio_rerio
ENSMZEG00005026745pabpc1b10090.409ENSDARG00000017219pabpc1a10090.409Danio_rerio
ENSMZEG00005026745pabpc1b5979.365ENSDNOG00000030926-9877.551Dasypus_novemcinctus
ENSMZEG00005026745pabpc1b5876.531ENSDORG00000011362-9876.531Dipodomys_ordii
ENSMZEG00005026745pabpc1b5976.699ENSEASG00005010399-9876.699Equus_asinus_asinus
ENSMZEG00005026745pabpc1b5976.699ENSECAG00000002620-9876.699Equus_caballus
ENSMZEG00005026745pabpc1b5973.469ENSEEUG00000008203-9873.469Erinaceus_europaeus
ENSMZEG00005026745pabpc1b10090.581ENSELUG00000015062-10090.581Esox_lucius
ENSMZEG00005026745pabpc1b9990.566ENSELUG00000003614pabpc1a10090.409Esox_lucius
ENSMZEG00005026745pabpc1b5958.621ENSELUG00000005389-9758.621Esox_lucius
ENSMZEG00005026745pabpc1b5878.061ENSFCAG00000039701-9878.061Felis_catus
ENSMZEG00005026745pabpc1b5978.061ENSFDAG00000005484-9878.061Fukomys_damarensis
ENSMZEG00005026745pabpc1b10092.902ENSFHEG00000008186pabpc1b10092.902Fundulus_heteroclitus
ENSMZEG00005026745pabpc1b10088.871ENSFHEG00000018979pabpc1a10089.028Fundulus_heteroclitus
ENSMZEG00005026745pabpc1b9988.080ENSGMOG00000013448pabpc1a10087.944Gadus_morhua
ENSMZEG00005026745pabpc1b10084.424ENSGMOG00000002448-10084.424Gadus_morhua
ENSMZEG00005026745pabpc1b10088.401ENSGAFG00000019750pabpc1a10088.558Gambusia_affinis
ENSMZEG00005026745pabpc1b10094.164ENSGAFG00000010193pabpc1b10094.164Gambusia_affinis
ENSMZEG00005026745pabpc1b10089.655ENSGACG00000003572pabpc1a10089.655Gasterosteus_aculeatus
ENSMZEG00005026745pabpc1b10091.277ENSGACG00000003771pabpc1b10091.589Gasterosteus_aculeatus
ENSMZEG00005026745pabpc1b5878.061ENSGGOG00000043933-9878.061Gorilla_gorilla
ENSMZEG00005026745pabpc1b5878.061ENSGGOG00000038606-9878.061Gorilla_gorilla
ENSMZEG00005026745pabpc1b100100.000ENSHBUG00000002075pabpc1b100100.000Haplochromis_burtoni
ENSMZEG00005026745pabpc1b9993.510ENSHBUG00000020487pabpc1a10093.510Haplochromis_burtoni
ENSMZEG00005026745pabpc1b5878.061ENSHGLG00000019762-9878.061Heterocephalus_glaber_female
ENSMZEG00005026745pabpc1b5878.061ENSHGLG00000019668-9878.061Heterocephalus_glaber_female
ENSMZEG00005026745pabpc1b5878.061ENSHGLG00100020854-9878.061Heterocephalus_glaber_male
ENSMZEG00005026745pabpc1b9871.774ENSHCOG00000003175pabpc1b9971.659Hippocampus_comes
ENSMZEG00005026745pabpc1b10089.185ENSHCOG00000013502pabpc1a10089.342Hippocampus_comes
ENSMZEG00005026745pabpc1b7455.532ENSIPUG00000021244-6655.010Ictalurus_punctatus
ENSMZEG00005026745pabpc1b10086.614ENSIPUG00000010791-10086.614Ictalurus_punctatus
ENSMZEG00005026745pabpc1b10087.874ENSIPUG00000008848pabpc1a10087.874Ictalurus_punctatus
ENSMZEG00005026745pabpc1b7555.224ENSIPUG00000018724-7855.224Ictalurus_punctatus
ENSMZEG00005026745pabpc1b5978.571ENSSTOG00000026028-9878.571Ictidomys_tridecemlineatus
ENSMZEG00005026745pabpc1b5978.571ENSSTOG00000022096-9878.571Ictidomys_tridecemlineatus
ENSMZEG00005026745pabpc1b5877.551ENSJJAG00000007037-9877.551Jaculus_jaculus
ENSMZEG00005026745pabpc1b10089.185ENSKMAG00000000605pabpc1a10088.871Kryptolebias_marmoratus
ENSMZEG00005026745pabpc1b10093.533ENSKMAG00000008049pabpc1b10093.849Kryptolebias_marmoratus
ENSMZEG00005026745pabpc1b10095.110ENSLBEG00000026845pabpc1b10095.110Labrus_bergylta
ENSMZEG00005026745pabpc1b10089.028ENSLBEG00000024002-10089.028Labrus_bergylta
ENSMZEG00005026745pabpc1b5977.436ENSLAFG00000023096-9877.436Loxodonta_africana
ENSMZEG00005026745pabpc1b5877.665ENSMFAG00000028878-9877.665Macaca_fascicularis
ENSMZEG00005026745pabpc1b5878.061ENSMMUG00000039929-9878.061Macaca_mulatta
ENSMZEG00005026745pabpc1b5878.061ENSMMUG00000037681-9878.061Macaca_mulatta
ENSMZEG00005026745pabpc1b5878.061ENSMMUG00000009740-9878.061Macaca_mulatta
ENSMZEG00005026745pabpc1b5878.061ENSMNEG00000037732-9878.061Macaca_nemestrina
ENSMZEG00005026745pabpc1b5878.061ENSMLEG00000027495-9878.061Mandrillus_leucophaeus
ENSMZEG00005026745pabpc1b10095.899ENSMAMG00000014610pabpc1b10095.899Mastacembelus_armatus
ENSMZEG00005026745pabpc1b9992.788ENSMAMG00000004502-10092.788Mastacembelus_armatus
ENSMZEG00005026745pabpc1b9993.510ENSMZEG00005025416pabpc1a10093.510Maylandia_zebra
ENSMZEG00005026745pabpc1b5878.061ENSMICG00000047642-9878.061Microcebus_murinus
ENSMZEG00005026745pabpc1b10088.170ENSMMOG00000018009pabpc1b10088.328Mola_mola
ENSMZEG00005026745pabpc1b9991.587ENSMMOG00000018044pabpc1a10091.587Mola_mola
ENSMZEG00005026745pabpc1b9966.456ENSMODG00000015024-9966.456Monodelphis_domestica
ENSMZEG00005026745pabpc1b9873.089ENSMODG00000013156-9873.248Monodelphis_domestica
ENSMZEG00005026745pabpc1b10087.224ENSMALG00000006066pabpc1b10089.117Monopterus_albus
ENSMZEG00005026745pabpc1b10089.028ENSMALG00000013020-10089.342Monopterus_albus
ENSMZEG00005026745pabpc1b5880.874ENSNGAG00000012688-9877.551Nannospalax_galili
ENSMZEG00005026745pabpc1b10099.685ENSNBRG00000013737pabpc1b10099.685Neolamprologus_brichardi
ENSMZEG00005026745pabpc1b9993.510ENSNBRG00000003068-10093.510Neolamprologus_brichardi
ENSMZEG00005026745pabpc1b5878.061ENSNLEG00000018128-9878.061Nomascus_leucogenys
ENSMZEG00005026745pabpc1b5877.551ENSODEG00000018540-9877.551Octodon_degus
ENSMZEG00005026745pabpc1b10099.369ENSONIG00000002717pabpc1b10099.369Oreochromis_niloticus
ENSMZEG00005026745pabpc1b10089.185ENSONIG00000006871-10089.185Oreochromis_niloticus
ENSMZEG00005026745pabpc1b5978.061ENSOCUG00000002565-9878.061Oryctolagus_cuniculus
ENSMZEG00005026745pabpc1b10087.382ENSORLG00000003008-10087.382Oryzias_latipes
ENSMZEG00005026745pabpc1b9992.162ENSORLG00000002691pabpc1a10092.162Oryzias_latipes
ENSMZEG00005026745pabpc1b10087.382ENSORLG00020022259-10087.382Oryzias_latipes_hni
ENSMZEG00005026745pabpc1b10088.088ENSORLG00020022398pabpc1a10088.245Oryzias_latipes_hni
ENSMZEG00005026745pabpc1b10087.931ENSORLG00015013633pabpc110088.088Oryzias_latipes_hsok
ENSMZEG00005026745pabpc1b10087.539ENSORLG00015010932-10087.539Oryzias_latipes_hsok
ENSMZEG00005026745pabpc1b10088.245ENSOMEG00000020219pabpc1a10088.401Oryzias_melastigma
ENSMZEG00005026745pabpc1b9986.331ENSOMEG00000013627pabpc1b10083.295Oryzias_melastigma
ENSMZEG00005026745pabpc1b5978.061ENSOGAG00000029513-9878.061Otolemur_garnettii
ENSMZEG00005026745pabpc1b5978.061ENSOGAG00000026047-9878.061Otolemur_garnettii
ENSMZEG00005026745pabpc1b5978.061ENSOARG00000005943-9878.061Ovis_aries
ENSMZEG00005026745pabpc1b5878.061ENSPPAG00000012920-9878.061Pan_paniscus
ENSMZEG00005026745pabpc1b5978.061ENSPPRG00000011804-9878.061Panthera_pardus
ENSMZEG00005026745pabpc1b5978.061ENSPPRG00000011809-9878.061Panthera_pardus
ENSMZEG00005026745pabpc1b5878.061ENSPTRG00000028252-9878.061Pan_troglodytes
ENSMZEG00005026745pabpc1b5878.061ENSPANG00000011549-9878.061Papio_anubis
ENSMZEG00005026745pabpc1b10094.803ENSPKIG00000005676pabpc1b10094.646Paramormyrops_kingsleyae
ENSMZEG00005026745pabpc1b7093.946ENSPMGG00000023134-9793.946Periophthalmus_magnuspinnatus
ENSMZEG00005026745pabpc1b7092.152ENSPMGG00000022487pabpc1a9292.152Periophthalmus_magnuspinnatus
ENSMZEG00005026745pabpc1b9970.860ENSPCIG00000016995-5570.860Phascolarctos_cinereus
ENSMZEG00005026745pabpc1b10087.692ENSPFOG00000010815pabpc1a10087.846Poecilia_formosa
ENSMZEG00005026745pabpc1b10093.691ENSPFOG00000005917pabpc1b10093.691Poecilia_formosa
ENSMZEG00005026745pabpc1b10094.006ENSPLAG00000001388pabpc1b10094.006Poecilia_latipinna
ENSMZEG00005026745pabpc1b10089.185ENSPLAG00000004114pabpc1a10089.342Poecilia_latipinna
ENSMZEG00005026745pabpc1b10089.185ENSPMEG00000001334pabpc1a10089.342Poecilia_mexicana
ENSMZEG00005026745pabpc1b10093.691ENSPMEG00000014399pabpc1b10093.691Poecilia_mexicana
ENSMZEG00005026745pabpc1b10094.006ENSPREG00000010911pabpc1b10094.006Poecilia_reticulata
ENSMZEG00005026745pabpc1b9993.029ENSPREG00000019595pabpc1a10093.029Poecilia_reticulata
ENSMZEG00005026745pabpc1b5978.061ENSPPYG00000020468-9878.061Pongo_abelii
ENSMZEG00005026745pabpc1b5978.061ENSPCAG00000005308-9878.061Procavia_capensis
ENSMZEG00005026745pabpc1b5878.571ENSPCOG00000026349-9878.571Propithecus_coquereli
ENSMZEG00005026745pabpc1b5978.974ENSPVAG00000016117-9878.974Pteropus_vampyrus
ENSMZEG00005026745pabpc1b10089.185ENSPNYG00000005192pabpc1a10089.185Pundamilia_nyererei
ENSMZEG00005026745pabpc1b100100.000ENSPNYG00000012578pabpc1b100100.000Pundamilia_nyererei
ENSMZEG00005026745pabpc1b10093.543ENSPNAG00000024626pabpc1b10093.543Pygocentrus_nattereri
ENSMZEG00005026745pabpc1b10089.937ENSPNAG00000028408pabpc1a10089.780Pygocentrus_nattereri
ENSMZEG00005026745pabpc1b8790.071ENSRBIG00000028738-9490.071Rhinopithecus_bieti
ENSMZEG00005026745pabpc1b5878.061ENSRBIG00000027173-9878.061Rhinopithecus_bieti
ENSMZEG00005026745pabpc1b5878.061ENSRROG00000017404-9878.061Rhinopithecus_roxellana
ENSMZEG00005026745pabpc1b9863.344ENSSHAG00000000511-10063.344Sarcophilus_harrisii
ENSMZEG00005026745pabpc1b10094.322ENSSFOG00015002752-10094.322Scleropages_formosus
ENSMZEG00005026745pabpc1b6479.769ENSSFOG00015019668-7779.769Scleropages_formosus
ENSMZEG00005026745pabpc1b10090.709ENSSFOG00015006662pabpc1a10090.709Scleropages_formosus
ENSMZEG00005026745pabpc1b10089.185ENSSMAG00000010803pabpc1a10089.185Scophthalmus_maximus
ENSMZEG00005026745pabpc1b10094.795ENSSMAG00000006869pabpc1b10094.795Scophthalmus_maximus
ENSMZEG00005026745pabpc1b10094.006ENSSDUG00000011965pabpc1b10094.006Seriola_dumerili
ENSMZEG00005026745pabpc1b10089.185ENSSDUG00000006675pabpc1a10089.185Seriola_dumerili
ENSMZEG00005026745pabpc1b10089.185ENSSLDG00000011661pabpc1a10089.185Seriola_lalandi_dorsalis
ENSMZEG00005026745pabpc1b10095.775ENSSLDG00000014156pabpc1b10095.775Seriola_lalandi_dorsalis
ENSMZEG00005026745pabpc1b10096.530ENSSPAG00000019265pabpc1b10096.530Stegastes_partitus
ENSMZEG00005026745pabpc1b10089.185ENSSPAG00000014453-10089.342Stegastes_partitus
ENSMZEG00005026745pabpc1b5878.061ENSSSCG00000032167-9878.061Sus_scrofa
ENSMZEG00005026745pabpc1b5878.061ENSSSCG00000036336-9878.061Sus_scrofa
ENSMZEG00005026745pabpc1b10088.401ENSTRUG00000011577-10088.401Takifugu_rubripes
ENSMZEG00005026745pabpc1b10090.866ENSTRUG00000003767-10091.024Takifugu_rubripes
ENSMZEG00005026745pabpc1b10085.781ENSTNIG00000013307pabpc1a10085.781Tetraodon_nigroviridis
ENSMZEG00005026745pabpc1b10090.596ENSTNIG00000009153pabpc1b10090.596Tetraodon_nigroviridis
ENSMZEG00005026745pabpc1b5978.061ENSTTRG00000013181-9878.061Tursiops_truncatus
ENSMZEG00005026745pabpc1b5878.061ENSUAMG00000008089-9878.061Ursus_americanus
ENSMZEG00005026745pabpc1b9753.094ENSUMAG00000023926-8967.403Ursus_maritimus
ENSMZEG00005026745pabpc1b5878.061ENSUMAG00000003364-9878.061Ursus_maritimus
ENSMZEG00005026745pabpc1b5977.000ENSVVUG00000015892-9777.000Vulpes_vulpes
ENSMZEG00005026745pabpc1b9945.536ENSXETG00000015439-10045.536Xenopus_tropicalis
ENSMZEG00005026745pabpc1b10089.117ENSXCOG00000019901pabpc1b10089.117Xiphophorus_couchianus
ENSMZEG00005026745pabpc1b10085.962ENSXCOG00000017066pabpc1a10085.804Xiphophorus_couchianus
ENSMZEG00005026745pabpc1b10094.006ENSXMAG00000003753pabpc1b10094.006Xiphophorus_maculatus
ENSMZEG00005026745pabpc1b10088.871ENSXMAG00000002555pabpc1a10089.028Xiphophorus_maculatus

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