EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005026847 (Gene tree)
Gene ID: 101479212
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6294 bases
Position: chrLG5:10836084-10842377
Accession: 101479212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005035971	zf-met	PF12874.7	2.2e-22	1	4
ENSMZEP00005035971	zf-met	PF12874.7	2.2e-22	2	4
ENSMZEP00005035971	zf-met	PF12874.7	2.2e-22	3	4
ENSMZEP00005035971	zf-met	PF12874.7	2.2e-22	4	4
ENSMZEP00005035971	zf-C2H2_jaz	PF12171.8	4.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005037237	-	2595	XM_023152506	ENSMZEP00005035971	599 (aa)	XP_023008274	UPI000D306E38

Gene Model

Click here to download ENSMZEG00005026847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005026847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005026847	-	88	65.804	ENSAPOG00000002875	-	100	65.619	Acanthochromis_polyacanthus
ENSMZEG00005026847	-	100	67.213	ENSAOCG00000007093	-	100	67.377	Amphiprion_ocellaris
ENSMZEG00005026847	-	100	61.412	ENSATEG00000023589	-	100	60.591	Anabas_testudineus
ENSMZEG00005026847	-	100	99.833	ENSACLG00000012751	-	100	99.833	Astatotilapia_calliptera
ENSMZEG00005026847	-	86	45.301	ENSCVAG00000018034	-	97	42.803	Cyprinodon_variegatus
ENSMZEG00005026847	-	55	51.613	ENSELUG00000010589	-	91	43.554	Esox_lucius
ENSMZEG00005026847	-	81	52.953	ENSGACG00000009018	-	100	52.113	Gasterosteus_aculeatus
ENSMZEG00005026847	-	100	98.333	ENSHBUG00000020963	-	100	98.333	Haplochromis_burtoni
ENSMZEG00005026847	-	85	47.025	ENSHCOG00000013075	-	100	45.681	Hippocampus_comes
ENSMZEG00005026847	-	66	44.146	ENSIPUG00000011933	-	98	40.667	Ictalurus_punctatus
ENSMZEG00005026847	-	100	59.839	ENSLBEG00000027221	-	99	60.161	Labrus_bergylta
ENSMZEG00005026847	-	86	58.206	ENSMMOG00000012396	-	96	58.588	Mola_mola
ENSMZEG00005026847	-	83	59.725	ENSMALG00000002560	-	99	61.886	Monopterus_albus
ENSMZEG00005026847	-	52	54.403	ENSPNAG00000006731	-	64	47.268	Pygocentrus_nattereri
ENSMZEG00005026847	-	86	57.576	ENSSMAG00000009994	-	98	56.203	Scophthalmus_maximus
ENSMZEG00005026847	-	100	61.626	ENSSDUG00000022406	-	100	64.553	Seriola_dumerili
ENSMZEG00005026847	-	52	68.671	ENSSPAG00000018876	-	99	66.732	Stegastes_partitus