EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027173 (Gene tree)
Gene ID: 101474145
Gene Symbol: hnrnpa1a
Alias: zgc:66127
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 2901 bases
Position: chrLG20:1938253-1941153
Accession: 101474145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005036409	RRM_1	PF00076.22	4.7e-36	1	2
ENSMZEP00005036409	RRM_1	PF00076.22	4.7e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005037688	-	1603	XM_004558812	ENSMZEP00005036409	334 (aa)	XP_004558869	UPI0003AF2A61

Gene Model

Click here to download ENSMZEG00005027173's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027173	hnrnpa1a	91	89.439	ENSAPOG00000019369	-	68	94.273	Acanthochromis_polyacanthus
ENSMZEG00005027173	hnrnpa1a	53	56.180	ENSACIG00000021815	-	87	56.180	Amphilophus_citrinellus
ENSMZEG00005027173	hnrnpa1a	91	89.439	ENSAOCG00000005289	-	90	89.439	Amphiprion_ocellaris
ENSMZEG00005027173	hnrnpa1a	91	89.439	ENSAPEG00000004179	-	90	89.439	Amphiprion_percula
ENSMZEG00005027173	hnrnpa1a	68	94.273	ENSATEG00000022918	hnrnpa1a	88	96.257	Anabas_testudineus
ENSMZEG00005027173	hnrnpa1a	52	59.748	ENSATEG00000003423	-	75	59.748	Anabas_testudineus
ENSMZEG00005027173	hnrnpa1a	100	99.701	ENSACLG00000006940	-	100	99.701	Astatotilapia_calliptera
ENSMZEG00005027173	hnrnpa1a	54	63.277	ENSAMXG00000037730	-	63	58.796	Astyanax_mexicanus
ENSMZEG00005027173	hnrnpa1a	54	55.814	ENSCSEG00000014051	-	73	54.237	Cynoglossus_semilaevis
ENSMZEG00005027173	hnrnpa1a	68	87.500	ENSCSEG00000007589	hnrnpa1a	89	81.967	Cynoglossus_semilaevis
ENSMZEG00005027173	hnrnpa1a	68	92.544	ENSCVAG00000012637	hnrnpa1a	66	93.363	Cyprinodon_variegatus
ENSMZEG00005027173	hnrnpa1a	57	81.250	ENSDARG00000011020	hnrnpa1a	86	61.194	Danio_rerio
ENSMZEG00005027173	hnrnpa1a	78	44.444	ENSDORG00000026425	-	79	44.891	Dipodomys_ordii
ENSMZEG00005027173	hnrnpa1a	55	61.667	ENSGMOG00000020353	-	94	61.667	Gadus_morhua
ENSMZEG00005027173	hnrnpa1a	53	53.933	ENSGAFG00000016803	-	64	50.935	Gambusia_affinis
ENSMZEG00005027173	hnrnpa1a	91	84.039	ENSGAFG00000007751	-	66	95.133	Gambusia_affinis
ENSMZEG00005027173	hnrnpa1a	63	89.944	ENSGACG00000009435	-	87	81.955	Gasterosteus_aculeatus
ENSMZEG00005027173	hnrnpa1a	100	99.701	ENSHBUG00000005647	hnrnpa1a	100	99.701	Haplochromis_burtoni
ENSMZEG00005027173	hnrnpa1a	55	62.921	ENSIPUG00000001991	-	77	62.921	Ictalurus_punctatus
ENSMZEG00005027173	hnrnpa1a	57	83.770	ENSIPUG00000002023	hnrnpa1a	76	86.286	Ictalurus_punctatus
ENSMZEG00005027173	hnrnpa1a	56	85.561	ENSIPUG00000022440	-	72	85.030	Ictalurus_punctatus
ENSMZEG00005027173	hnrnpa1a	100	84.071	ENSKMAG00000020859	-	89	88.119	Kryptolebias_marmoratus
ENSMZEG00005027173	hnrnpa1a	68	91.228	ENSLBEG00000010010	hnrnpa1a	91	81.962	Labrus_bergylta
ENSMZEG00005027173	hnrnpa1a	64	72.432	ENSMFAG00000028351	-	63	67.593	Macaca_fascicularis
ENSMZEG00005027173	hnrnpa1a	68	94.273	ENSMAMG00000007606	-	66	92.511	Mastacembelus_armatus
ENSMZEG00005027173	hnrnpa1a	83	75.362	ENSMMOG00000008251	hnrnpa1a	93	85.398	Mola_mola
ENSMZEG00005027173	hnrnpa1a	68	94.273	ENSMALG00000014091	hnrnpa1a	65	92.511	Monopterus_albus
ENSMZEG00005027173	hnrnpa1a	53	56.497	ENSMALG00000008886	-	86	56.497	Monopterus_albus
ENSMZEG00005027173	hnrnpa1a	100	99.102	ENSNBRG00000018441	-	100	99.102	Neolamprologus_brichardi
ENSMZEG00005027173	hnrnpa1a	58	57.592	ENSNBRG00000014469	-	82	60.227	Neolamprologus_brichardi
ENSMZEG00005027173	hnrnpa1a	54	51.977	ENSORLG00000029240	-	89	52.874	Oryzias_latipes
ENSMZEG00005027173	hnrnpa1a	91	90.132	ENSORLG00000008001	-	68	94.248	Oryzias_latipes
ENSMZEG00005027173	hnrnpa1a	53	51.724	ENSORLG00020006043	-	59	51.724	Oryzias_latipes_hni
ENSMZEG00005027173	hnrnpa1a	54	51.977	ENSORLG00020022498	-	80	52.874	Oryzias_latipes_hni
ENSMZEG00005027173	hnrnpa1a	91	90.132	ENSORLG00020006582	hnrnpa1a	98	93.333	Oryzias_latipes_hni
ENSMZEG00005027173	hnrnpa1a	91	90.461	ENSORLG00015022294	-	97	85.070	Oryzias_latipes_hsok
ENSMZEG00005027173	hnrnpa1a	100	89.614	ENSOMEG00000015959	-	68	93.805	Oryzias_melastigma
ENSMZEG00005027173	hnrnpa1a	57	56.452	ENSPMGG00000016392	-	93	58.101	Periophthalmus_magnuspinnatus
ENSMZEG00005027173	hnrnpa1a	56	94.086	ENSPMGG00000011804	hnrnpa1a	80	84.305	Periophthalmus_magnuspinnatus
ENSMZEG00005027173	hnrnpa1a	68	94.737	ENSPFOG00000001825	-	66	95.133	Poecilia_formosa
ENSMZEG00005027173	hnrnpa1a	68	94.737	ENSPMEG00000002425	-	66	95.133	Poecilia_mexicana
ENSMZEG00005027173	hnrnpa1a	58	57.592	ENSPNYG00000020729	-	90	60.227	Pundamilia_nyererei
ENSMZEG00005027173	hnrnpa1a	56	86.631	ENSPNAG00000021630	-	56	86.413	Pygocentrus_nattereri
ENSMZEG00005027173	hnrnpa1a	55	86.842	ENSPNAG00000007752	hnrnpa1a	86	77.523	Pygocentrus_nattereri
ENSMZEG00005027173	hnrnpa1a	64	89.252	ENSSMAG00000004641	hnrnpa1a	97	74.118	Scophthalmus_maximus
ENSMZEG00005027173	hnrnpa1a	54	59.639	ENSSMAG00000010279	-	93	59.639	Scophthalmus_maximus
ENSMZEG00005027173	hnrnpa1a	53	55.682	ENSSMAG00000010246	-	79	55.367	Scophthalmus_maximus
ENSMZEG00005027173	hnrnpa1a	89	97.872	ENSSDUG00000013908	hnrnpa1a	92	88.288	Seriola_dumerili
ENSMZEG00005027173	hnrnpa1a	53	60.819	ENSSDUG00000002431	-	81	60.819	Seriola_dumerili
ENSMZEG00005027173	hnrnpa1a	89	71.477	ENSSLDG00000003718	hnrnpa1a	94	87.879	Seriola_lalandi_dorsalis
ENSMZEG00005027173	hnrnpa1a	92	88.103	ENSSPAG00000018518	-	69	89.868	Stegastes_partitus
ENSMZEG00005027173	hnrnpa1a	69	88.210	ENSTRUG00000020491	-	70	88.210	Takifugu_rubripes
ENSMZEG00005027173	hnrnpa1a	57	61.538	ENSTNIG00000007398	-	84	56.364	Tetraodon_nigroviridis
ENSMZEG00005027173	hnrnpa1a	82	76.557	ENSXCOG00000009001	-	95	91.111	Xiphophorus_couchianus
ENSMZEG00005027173	hnrnpa1a	91	87.702	ENSXMAG00000008076	-	90	87.702	Xiphophorus_maculatus