EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027343 (Gene tree)
Gene ID: 101463936
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 4909 bases
Position: chrLG13:8314047-8318955
Accession: 101463936
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005036664	Sas10_Utp3	PF04000.15	4.2e-18	1	1
ENSMZEP00005036663	Sas10_Utp3	PF04000.15	4.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005037950	-	561	XM_004553449	ENSMZEP00005036664	146 (aa)	XP_004553506	UPI000329D021
ENSMZET00005037949	-	456	-	ENSMZEP00005036663	151 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005027343's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027343's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027343	c1d	92	61.940	ENSG00000197223	C1D	82	67.241	Homo_sapiens
ENSMZEG00005027343	c1d	97	84.354	ENSAPOG00000005466	c1d	95	80.272	Acanthochromis_polyacanthus
ENSMZEG00005027343	c1d	87	64.567	ENSAMEG00000004859	C1D	79	67.241	Ailuropoda_melanoleuca
ENSMZEG00005027343	c1d	88	94.531	ENSACIG00000012684	c1d	77	94.915	Amphilophus_citrinellus
ENSMZEG00005027343	c1d	97	82.270	ENSAOCG00000020354	c1d	96	79.054	Amphiprion_ocellaris
ENSMZEG00005027343	c1d	98	81.757	ENSAPEG00000001403	c1d	96	79.730	Amphiprion_percula
ENSMZEG00005027343	c1d	99	82.550	ENSATEG00000012922	c1d	96	81.879	Anabas_testudineus
ENSMZEG00005027343	c1d	93	61.765	ENSAPLG00000009320	C1D	85	65.854	Anas_platyrhynchos
ENSMZEG00005027343	c1d	81	70.339	ENSACAG00000001337	C1D	95	70.690	Anolis_carolinensis
ENSMZEG00005027343	c1d	92	61.194	ENSANAG00000035972	-	82	66.379	Aotus_nancymaae
ENSMZEG00005027343	c1d	92	58.209	ENSANAG00000005773	-	82	62.931	Aotus_nancymaae
ENSMZEG00005027343	c1d	97	100.000	ENSACLG00000026206	c1d	95	100.000	Astatotilapia_calliptera
ENSMZEG00005027343	c1d	88	72.868	ENSAMXG00000043212	c1d	81	77.119	Astyanax_mexicanus
ENSMZEG00005027343	c1d	92	61.940	ENSBTAG00000049002	C1D	82	67.241	Bos_taurus
ENSMZEG00005027343	c1d	92	61.940	ENSCJAG00000006589	C1D	76	67.241	Callithrix_jacchus
ENSMZEG00005027343	c1d	71	63.462	ENSCJAG00000044668	-	81	63.462	Callithrix_jacchus
ENSMZEG00005027343	c1d	87	66.142	ENSCAFG00000030099	C1D	82	68.103	Canis_familiaris
ENSMZEG00005027343	c1d	87	66.142	ENSCAFG00020026997	C1D	82	68.103	Canis_lupus_dingo
ENSMZEG00005027343	c1d	92	61.940	ENSCHIG00000025729	C1D	82	67.241	Capra_hircus
ENSMZEG00005027343	c1d	92	61.940	ENSTSYG00000035739	-	82	67.241	Carlito_syrichta
ENSMZEG00005027343	c1d	75	64.220	ENSTSYG00000026573	-	70	63.636	Carlito_syrichta
ENSMZEG00005027343	c1d	73	60.377	ENSCAPG00000011523	-	88	60.377	Cavia_aperea
ENSMZEG00005027343	c1d	92	64.925	ENSCPOG00000037986	-	82	69.828	Cavia_porcellus
ENSMZEG00005027343	c1d	73	61.321	ENSCPOG00000020112	-	88	61.321	Cavia_porcellus
ENSMZEG00005027343	c1d	92	61.940	ENSCCAG00000030405	-	82	67.241	Cebus_capucinus
ENSMZEG00005027343	c1d	92	61.194	ENSCATG00000043348	-	82	66.379	Cercocebus_atys
ENSMZEG00005027343	c1d	92	61.194	ENSCATG00000045336	C1D	82	67.241	Cercocebus_atys
ENSMZEG00005027343	c1d	88	64.062	ENSCLAG00000011883	C1D	83	66.667	Chinchilla_lanigera
ENSMZEG00005027343	c1d	87	63.780	ENSCSAG00000014811	C1D	82	67.241	Chlorocebus_sabaeus
ENSMZEG00005027343	c1d	92	61.940	ENSCHOG00000006719	C1D	65	67.241	Choloepus_hoffmanni
ENSMZEG00005027343	c1d	92	62.687	ENSCPBG00000014451	C1D	80	67.797	Chrysemys_picta_bellii
ENSMZEG00005027343	c1d	82	46.218	ENSCING00000020906	-	62	46.218	Ciona_intestinalis
ENSMZEG00005027343	c1d	84	46.341	ENSCSAVG00000000150	-	68	46.218	Ciona_savignyi
ENSMZEG00005027343	c1d	68	67.000	ENSCANG00000036599	-	81	67.000	Colobus_angolensis_palliatus
ENSMZEG00005027343	c1d	92	61.194	ENSCANG00000035564	C1D	82	67.241	Colobus_angolensis_palliatus
ENSMZEG00005027343	c1d	84	65.854	ENSCGRG00001023376	C1d	82	68.103	Cricetulus_griseus_chok1gshd
ENSMZEG00005027343	c1d	84	65.854	ENSCGRG00000010245	C1d	82	68.103	Cricetulus_griseus_crigri
ENSMZEG00005027343	c1d	97	75.510	ENSCSEG00000000587	c1d	81	86.207	Cynoglossus_semilaevis
ENSMZEG00005027343	c1d	98	76.871	ENSCVAG00000004603	c1d	97	75.342	Cyprinodon_variegatus
ENSMZEG00005027343	c1d	81	67.797	ENSDARG00000021112	c1d	80	67.797	Danio_rerio
ENSMZEG00005027343	c1d	92	54.478	ENSDNOG00000046068	-	82	58.621	Dasypus_novemcinctus
ENSMZEG00005027343	c1d	87	62.992	ENSDORG00000003300	C1d	82	65.517	Dipodomys_ordii
ENSMZEG00005027343	c1d	65	67.368	ENSETEG00000014857	C1D	81	75.325	Echinops_telfairi
ENSMZEG00005027343	c1d	83	52.066	ENSEBUG00000006874	c1d	72	54.386	Eptatretus_burgeri
ENSMZEG00005027343	c1d	87	64.567	ENSEASG00005007307	C1D	75	67.241	Equus_asinus_asinus
ENSMZEG00005027343	c1d	87	64.567	ENSECAG00000002187	C1D	83	67.241	Equus_caballus
ENSMZEG00005027343	c1d	87	74.803	ENSELUG00000014823	c1d	82	77.311	Esox_lucius
ENSMZEG00005027343	c1d	92	61.940	ENSFCAG00000028933	C1D	82	67.241	Felis_catus
ENSMZEG00005027343	c1d	82	66.387	ENSFALG00000013640	C1D	70	67.241	Ficedula_albicollis
ENSMZEG00005027343	c1d	92	61.940	ENSFDAG00000010462	-	82	67.241	Fukomys_damarensis
ENSMZEG00005027343	c1d	89	51.111	ENSFDAG00000014175	-	72	65.169	Fukomys_damarensis
ENSMZEG00005027343	c1d	94	79.562	ENSFHEG00000010545	c1d	88	80.147	Fundulus_heteroclitus
ENSMZEG00005027343	c1d	83	76.860	ENSGMOG00000013911	-	93	78.632	Gadus_morhua
ENSMZEG00005027343	c1d	82	68.333	ENSGALG00000008765	C1D	85	66.393	Gallus_gallus
ENSMZEG00005027343	c1d	99	77.027	ENSGAFG00000012578	c1d	98	71.895	Gambusia_affinis
ENSMZEG00005027343	c1d	83	81.818	ENSGACG00000011981	c1d	91	83.621	Gasterosteus_aculeatus
ENSMZEG00005027343	c1d	82	66.667	ENSGAGG00000013383	C1D	80	66.949	Gopherus_agassizii
ENSMZEG00005027343	c1d	89	61.654	ENSGGOG00000025808	-	70	63.934	Gorilla_gorilla
ENSMZEG00005027343	c1d	87	64.567	ENSGGOG00000025982	-	64	67.241	Gorilla_gorilla
ENSMZEG00005027343	c1d	94	58.865	ENSGGOG00000022296	-	87	63.415	Gorilla_gorilla
ENSMZEG00005027343	c1d	100	100.000	ENSHBUG00000018531	c1d	89	99.324	Haplochromis_burtoni
ENSMZEG00005027343	c1d	79	63.478	ENSHGLG00000021219	-	82	63.478	Heterocephalus_glaber_female
ENSMZEG00005027343	c1d	84	65.041	ENSHGLG00000012332	-	82	67.241	Heterocephalus_glaber_female
ENSMZEG00005027343	c1d	92	61.940	ENSHGLG00100000221	-	82	67.241	Heterocephalus_glaber_male
ENSMZEG00005027343	c1d	79	64.348	ENSHGLG00100019951	-	82	64.348	Heterocephalus_glaber_male
ENSMZEG00005027343	c1d	99	76.712	ENSHCOG00000014568	C1D	99	72.297	Hippocampus_comes
ENSMZEG00005027343	c1d	99	76.712	ENSHCOG00000014589	c1d	99	72.297	Hippocampus_comes
ENSMZEG00005027343	c1d	86	67.442	ENSIPUG00000018661	c1d	80	70.690	Ictalurus_punctatus
ENSMZEG00005027343	c1d	87	64.567	ENSSTOG00000012346	C1D	82	67.241	Ictidomys_tridecemlineatus
ENSMZEG00005027343	c1d	89	55.224	ENSJJAG00000016086	-	88	57.724	Jaculus_jaculus
ENSMZEG00005027343	c1d	83	62.016	ENSJJAG00000023186	-	89	65.812	Jaculus_jaculus
ENSMZEG00005027343	c1d	86	60.317	ENSJJAG00000005044	-	83	62.609	Jaculus_jaculus
ENSMZEG00005027343	c1d	88	61.240	ENSJJAG00000009540	-	86	63.559	Jaculus_jaculus
ENSMZEG00005027343	c1d	99	79.730	ENSKMAG00000015077	c1d	96	79.730	Kryptolebias_marmoratus
ENSMZEG00005027343	c1d	97	82.993	ENSLBEG00000008351	c1d	95	80.272	Labrus_bergylta
ENSMZEG00005027343	c1d	97	63.121	ENSLACG00000007516	C1D	78	70.690	Latimeria_chalumnae
ENSMZEG00005027343	c1d	99	65.517	ENSLOCG00000016024	c1d	81	73.109	Lepisosteus_oculatus
ENSMZEG00005027343	c1d	92	61.194	ENSLAFG00000002083	C1D	82	66.379	Loxodonta_africana
ENSMZEG00005027343	c1d	92	61.194	ENSMFAG00000034034	-	82	66.379	Macaca_fascicularis
ENSMZEG00005027343	c1d	92	61.194	ENSMFAG00000034261	C1D	82	67.241	Macaca_fascicularis
ENSMZEG00005027343	c1d	92	60.448	ENSMFAG00000028681	-	82	66.379	Macaca_fascicularis
ENSMZEG00005027343	c1d	92	60.448	ENSMMUG00000043184	-	82	65.517	Macaca_mulatta
ENSMZEG00005027343	c1d	87	63.780	ENSMMUG00000041557	C1D	83	67.241	Macaca_mulatta
ENSMZEG00005027343	c1d	92	60.448	ENSMMUG00000017209	-	82	66.379	Macaca_mulatta
ENSMZEG00005027343	c1d	92	61.194	ENSMNEG00000040612	C1D	82	67.241	Macaca_nemestrina
ENSMZEG00005027343	c1d	92	61.194	ENSMNEG00000020626	-	82	66.379	Macaca_nemestrina
ENSMZEG00005027343	c1d	92	61.194	ENSMLEG00000027619	C1D	82	67.241	Mandrillus_leucophaeus
ENSMZEG00005027343	c1d	92	61.194	ENSMLEG00000028412	-	82	66.379	Mandrillus_leucophaeus
ENSMZEG00005027343	c1d	97	80.272	ENSMAMG00000022156	c1d	95	80.272	Mastacembelus_armatus
ENSMZEG00005027343	c1d	89	63.077	ENSMGAG00000004517	C1D	86	65.574	Meleagris_gallopavo
ENSMZEG00005027343	c1d	87	64.567	ENSMAUG00000008974	C1d	82	68.103	Mesocricetus_auratus
ENSMZEG00005027343	c1d	92	63.433	ENSMICG00000032141	C1D	82	68.966	Microcebus_murinus
ENSMZEG00005027343	c1d	86	65.600	ENSMOCG00000010860	C1d	84	67.797	Microtus_ochrogaster
ENSMZEG00005027343	c1d	97	76.871	ENSMMOG00000007332	c1d	75	86.207	Mola_mola
ENSMZEG00005027343	c1d	82	67.227	ENSMODG00000003561	C1D	85	66.116	Monodelphis_domestica
ENSMZEG00005027343	c1d	97	85.915	ENSMALG00000020864	c1d	95	85.915	Monopterus_albus
ENSMZEG00005027343	c1d	87	65.354	MGP_CAROLIEiJ_G0016110	C1d	94	69.369	Mus_caroli
ENSMZEG00005027343	c1d	87	65.354	ENSMUSG00000000581	C1d	94	69.369	Mus_musculus
ENSMZEG00005027343	c1d	90	64.394	MGP_PahariEiJ_G0016781	C1d	94	70.270	Mus_pahari
ENSMZEG00005027343	c1d	87	65.354	MGP_SPRETEiJ_G0016952	C1d	94	69.369	Mus_spretus
ENSMZEG00005027343	c1d	87	65.354	ENSMPUG00000006224	C1D	82	68.103	Mustela_putorius_furo
ENSMZEG00005027343	c1d	90	61.364	ENSMLUG00000029990	-	82	65.517	Myotis_lucifugus
ENSMZEG00005027343	c1d	90	64.394	ENSMLUG00000010791	-	82	68.966	Myotis_lucifugus
ENSMZEG00005027343	c1d	90	62.879	ENSMLUG00000024947	-	82	67.241	Myotis_lucifugus
ENSMZEG00005027343	c1d	75	60.909	ENSNGAG00000012482	-	85	61.682	Nannospalax_galili
ENSMZEG00005027343	c1d	92	56.716	ENSNGAG00000016675	-	82	61.739	Nannospalax_galili
ENSMZEG00005027343	c1d	87	62.205	ENSNGAG00000011872	-	82	64.655	Nannospalax_galili
ENSMZEG00005027343	c1d	100	98.630	ENSNBRG00000010704	c1d	100	98.630	Neolamprologus_brichardi
ENSMZEG00005027343	c1d	87	64.567	ENSNLEG00000032919	-	64	67.241	Nomascus_leucogenys
ENSMZEG00005027343	c1d	86	64.000	ENSOPRG00000009586	C1D	82	66.379	Ochotona_princeps
ENSMZEG00005027343	c1d	86	64.800	ENSODEG00000018885	-	83	67.241	Octodon_degus
ENSMZEG00005027343	c1d	86	64.800	ENSODEG00000011242	-	82	67.241	Octodon_degus
ENSMZEG00005027343	c1d	80	58.974	ENSODEG00000018525	-	81	60.526	Octodon_degus
ENSMZEG00005027343	c1d	99	97.241	ENSONIG00000001233	c1d	97	97.241	Oreochromis_niloticus
ENSMZEG00005027343	c1d	65	75.789	ENSOANG00000008385	C1D	84	76.344	Ornithorhynchus_anatinus
ENSMZEG00005027343	c1d	88	63.281	ENSOCUG00000025587	-	82	66.379	Oryctolagus_cuniculus
ENSMZEG00005027343	c1d	88	63.281	ENSOCUG00000009771	-	82	66.379	Oryctolagus_cuniculus
ENSMZEG00005027343	c1d	98	77.852	ENSORLG00000021968	c1d	95	72.973	Oryzias_latipes
ENSMZEG00005027343	c1d	98	78.523	ENSORLG00020000507	c1d	96	73.649	Oryzias_latipes_hni
ENSMZEG00005027343	c1d	98	77.852	ENSORLG00015004594	c1d	94	72.973	Oryzias_latipes_hsok
ENSMZEG00005027343	c1d	98	77.703	ENSOMEG00000004672	c1d	95	77.703	Oryzias_melastigma
ENSMZEG00005027343	c1d	87	62.992	ENSOGAG00000027934	-	82	65.517	Otolemur_garnettii
ENSMZEG00005027343	c1d	92	61.940	ENSOARG00000019931	C1D	82	67.241	Ovis_aries
ENSMZEG00005027343	c1d	92	61.940	ENSPPAG00000037847	-	82	67.241	Pan_paniscus
ENSMZEG00005027343	c1d	94	59.286	ENSPPAG00000040091	-	70	63.934	Pan_paniscus
ENSMZEG00005027343	c1d	55	59.259	ENSPPRG00000022830	-	61	62.857	Panthera_pardus
ENSMZEG00005027343	c1d	92	61.940	ENSPPRG00000017045	-	82	67.241	Panthera_pardus
ENSMZEG00005027343	c1d	92	61.940	ENSPTIG00000009414	C1D	82	67.241	Panthera_tigris_altaica
ENSMZEG00005027343	c1d	92	61.940	ENSPTRG00000023558	C1D	82	67.241	Pan_troglodytes
ENSMZEG00005027343	c1d	92	61.940	ENSPANG00000000501	-	82	67.241	Papio_anubis
ENSMZEG00005027343	c1d	87	63.780	ENSPANG00000002886	C1D	64	67.241	Papio_anubis
ENSMZEG00005027343	c1d	83	66.942	ENSPKIG00000004877	c1d	83	65.041	Paramormyrops_kingsleyae
ENSMZEG00005027343	c1d	92	62.687	ENSPSIG00000010015	C1D	81	67.797	Pelodiscus_sinensis
ENSMZEG00005027343	c1d	97	80.952	ENSPMGG00000009326	c1d	99	76.471	Periophthalmus_magnuspinnatus
ENSMZEG00005027343	c1d	82	65.833	ENSPCIG00000018629	-	84	66.387	Phascolarctos_cinereus
ENSMZEG00005027343	c1d	94	54.745	ENSPCIG00000006831	-	85	59.016	Phascolarctos_cinereus
ENSMZEG00005027343	c1d	99	79.054	ENSPFOG00000003686	c1d	96	75.676	Poecilia_formosa
ENSMZEG00005027343	c1d	99	79.054	ENSPLAG00000000228	c1d	96	75.676	Poecilia_latipinna
ENSMZEG00005027343	c1d	99	79.054	ENSPMEG00000023213	c1d	96	75.676	Poecilia_mexicana
ENSMZEG00005027343	c1d	97	80.137	ENSPREG00000000742	c1d	95	76.712	Poecilia_reticulata
ENSMZEG00005027343	c1d	92	58.955	ENSPPYG00000002294	-	82	63.793	Pongo_abelii
ENSMZEG00005027343	c1d	92	61.940	ENSPPYG00000012354	C1D	64	67.241	Pongo_abelii
ENSMZEG00005027343	c1d	87	51.969	ENSPCAG00000010088	C1D	65	55.172	Procavia_capensis
ENSMZEG00005027343	c1d	92	63.433	ENSPCOG00000016112	C1D	82	68.966	Propithecus_coquereli
ENSMZEG00005027343	c1d	87	64.567	ENSPVAG00000012692	C1D	65	67.241	Pteropus_vampyrus
ENSMZEG00005027343	c1d	100	99.315	ENSPNYG00000008789	c1d	100	99.315	Pundamilia_nyererei
ENSMZEG00005027343	c1d	86	75.200	ENSPNAG00000004219	c1d	80	77.778	Pygocentrus_nattereri
ENSMZEG00005027343	c1d	87	65.354	ENSRNOG00000005982	C1d	82	68.103	Rattus_norvegicus
ENSMZEG00005027343	c1d	92	60.448	ENSRBIG00000026211	-	82	65.517	Rhinopithecus_bieti
ENSMZEG00005027343	c1d	92	61.194	ENSRROG00000029013	C1D	82	67.241	Rhinopithecus_roxellana
ENSMZEG00005027343	c1d	92	61.194	ENSRROG00000005944	-	82	66.379	Rhinopithecus_roxellana
ENSMZEG00005027343	c1d	92	61.940	ENSSBOG00000025275	C1D	82	67.241	Saimiri_boliviensis_boliviensis
ENSMZEG00005027343	c1d	82	66.667	ENSSHAG00000008352	C1D	57	67.227	Sarcophilus_harrisii
ENSMZEG00005027343	c1d	89	66.418	ENSSFOG00015010861	c1d	84	71.795	Scleropages_formosus
ENSMZEG00005027343	c1d	99	79.333	ENSSMAG00000019230	c1d	77	87.395	Scophthalmus_maximus
ENSMZEG00005027343	c1d	99	84.000	ENSSDUG00000020213	c1d	97	81.333	Seriola_dumerili
ENSMZEG00005027343	c1d	99	84.000	ENSSLDG00000017371	c1d	97	81.333	Seriola_lalandi_dorsalis
ENSMZEG00005027343	c1d	83	64.463	ENSSPUG00000006525	C1D	82	64.706	Sphenodon_punctatus
ENSMZEG00005027343	c1d	97	85.616	ENSSPAG00000008574	c1d	94	82.877	Stegastes_partitus
ENSMZEG00005027343	c1d	73	58.491	ENSSSCG00000035701	-	88	58.491	Sus_scrofa
ENSMZEG00005027343	c1d	92	61.940	ENSSSCG00000039331	-	82	67.241	Sus_scrofa
ENSMZEG00005027343	c1d	82	67.227	ENSTGUG00000002367	C1D	81	68.103	Taeniopygia_guttata
ENSMZEG00005027343	c1d	98	76.351	ENSTRUG00000012245	c1d	93	72.727	Takifugu_rubripes
ENSMZEG00005027343	c1d	95	79.021	ENSTNIG00000009827	c1d	80	87.288	Tetraodon_nigroviridis
ENSMZEG00005027343	c1d	92	61.194	ENSTBEG00000009797	C1D	82	67.241	Tupaia_belangeri
ENSMZEG00005027343	c1d	92	61.194	ENSTTRG00000013982	C1D	67	66.379	Tursiops_truncatus
ENSMZEG00005027343	c1d	92	53.285	ENSUAMG00000025246	C1D	77	59.649	Ursus_americanus
ENSMZEG00005027343	c1d	92	61.940	ENSUMAG00000021118	-	82	67.241	Ursus_maritimus
ENSMZEG00005027343	c1d	64	56.701	ENSUMAG00000006451	-	85	57.009	Ursus_maritimus
ENSMZEG00005027343	c1d	87	66.142	ENSVPAG00000012080	C1D	65	68.966	Vicugna_pacos
ENSMZEG00005027343	c1d	87	66.142	ENSVVUG00000027629	C1D	73	68.103	Vulpes_vulpes
ENSMZEG00005027343	c1d	84	65.854	ENSXETG00000025934	c1d	79	68.696	Xenopus_tropicalis
ENSMZEG00005027343	c1d	97	79.452	ENSXCOG00000013813	c1d	95	75.342	Xiphophorus_couchianus
ENSMZEG00005027343	c1d	97	80.137	ENSXMAG00000022273	c1d	95	76.027	Xiphophorus_maculatus