EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027369 (Gene tree)
Gene ID: 101464474
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 50687 bases
Position: chrLG13:9304738-9355424
Accession: 101464474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005036711	S1	PF00575.23	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005037997	-	3949	XM_004570085	ENSMZEP00005036711	1021 (aa)	XP_004570142	UPI00032980B0

Gene Model

Click here to download ENSMZEG00005027369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027369	si:ch211-117n7.8	94	52.615	ENSG00000068784	SRBD1	94	53.002	Homo_sapiens
ENSMZEG00005027369	si:ch211-117n7.8	100	84.262	ENSAPOG00000005103	si:ch211-117n7.8	100	83.969	Acanthochromis_polyacanthus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.626	ENSAMEG00000005993	SRBD1	99	50.828	Ailuropoda_melanoleuca
ENSMZEG00005027369	si:ch211-117n7.8	97	87.992	ENSACIG00000009875	si:ch211-117n7.8	100	87.992	Amphilophus_citrinellus
ENSMZEG00005027369	si:ch211-117n7.8	100	82.779	ENSAOCG00000024718	si:ch211-117n7.8	100	82.779	Amphiprion_ocellaris
ENSMZEG00005027369	si:ch211-117n7.8	97	82.329	ENSAPEG00000002645	si:ch211-117n7.8	100	82.329	Amphiprion_percula
ENSMZEG00005027369	si:ch211-117n7.8	100	81.391	ENSATEG00000010844	si:ch211-117n7.8	100	81.391	Anabas_testudineus
ENSMZEG00005027369	si:ch211-117n7.8	94	54.205	ENSAPLG00000006313	SRBD1	100	52.245	Anas_platyrhynchos
ENSMZEG00005027369	si:ch211-117n7.8	94	52.210	ENSANAG00000025573	SRBD1	99	50.584	Aotus_nancymaae
ENSMZEG00005027369	si:ch211-117n7.8	100	99.804	ENSACLG00000024219	si:ch211-117n7.8	100	99.804	Astatotilapia_calliptera
ENSMZEG00005027369	si:ch211-117n7.8	100	62.607	ENSAMXG00000004294	SRBD1	100	64.120	Astyanax_mexicanus
ENSMZEG00005027369	si:ch211-117n7.8	83	57.093	ENSBTAG00000007508	SRBD1	99	49.365	Bos_taurus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.303	ENSCJAG00000000727	SRBD1	99	50.194	Callithrix_jacchus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.826	ENSCAFG00000002554	SRBD1	99	51.312	Canis_familiaris
ENSMZEG00005027369	si:ch211-117n7.8	94	50.412	ENSCAFG00020026284	SRBD1	98	57.311	Canis_lupus_dingo
ENSMZEG00005027369	si:ch211-117n7.8	83	57.093	ENSCHIG00000016535	SRBD1	98	50.674	Capra_hircus
ENSMZEG00005027369	si:ch211-117n7.8	94	53.360	ENSTSYG00000012797	SRBD1	96	53.157	Carlito_syrichta
ENSMZEG00005027369	si:ch211-117n7.8	94	53.161	ENSCPOG00000004773	SRBD1	96	52.789	Cavia_porcellus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.205	ENSCCAG00000025589	SRBD1	99	50.583	Cebus_capucinus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.821	ENSCATG00000039530	SRBD1	96	53.128	Cercocebus_atys
ENSMZEG00005027369	si:ch211-117n7.8	99	51.074	ENSCLAG00000008623	SRBD1	100	50.481	Chinchilla_lanigera
ENSMZEG00005027369	si:ch211-117n7.8	94	52.497	ENSCSAG00000013350	SRBD1	96	52.599	Chlorocebus_sabaeus
ENSMZEG00005027369	si:ch211-117n7.8	81	74.419	ENSCHOG00000003805	SRBD1	82	74.419	Choloepus_hoffmanni
ENSMZEG00005027369	si:ch211-117n7.8	82	58.588	ENSCPBG00000005677	SRBD1	97	52.663	Chrysemys_picta_bellii
ENSMZEG00005027369	si:ch211-117n7.8	77	39.900	ENSCING00000005950	-	99	39.900	Ciona_intestinalis
ENSMZEG00005027369	si:ch211-117n7.8	77	41.562	ENSCSAVG00000000861	-	99	41.436	Ciona_savignyi
ENSMZEG00005027369	si:ch211-117n7.8	94	52.464	ENSCANG00000016307	SRBD1	95	52.752	Colobus_angolensis_palliatus
ENSMZEG00005027369	si:ch211-117n7.8	83	56.824	ENSCGRG00001000513	Srbd1	85	56.824	Cricetulus_griseus_chok1gshd
ENSMZEG00005027369	si:ch211-117n7.8	83	56.824	ENSCGRG00000002283	Srbd1	85	56.824	Cricetulus_griseus_crigri
ENSMZEG00005027369	si:ch211-117n7.8	100	72.293	ENSCSEG00000000856	si:ch211-117n7.8	100	72.293	Cynoglossus_semilaevis
ENSMZEG00005027369	si:ch211-117n7.8	91	85.219	ENSCVAG00000020212	si:ch211-117n7.8	99	77.600	Cyprinodon_variegatus
ENSMZEG00005027369	si:ch211-117n7.8	83	55.568	ENSDNOG00000018686	SRBD1	84	55.452	Dasypus_novemcinctus
ENSMZEG00005027369	si:ch211-117n7.8	99	51.315	ENSDORG00000010468	Srbd1	84	57.720	Dipodomys_ordii
ENSMZEG00005027369	si:ch211-117n7.8	77	34.887	FBgn0051156	CG31156	79	35.302	Drosophila_melanogaster
ENSMZEG00005027369	si:ch211-117n7.8	84	57.685	ENSETEG00000000739	SRBD1	90	57.532	Echinops_telfairi
ENSMZEG00005027369	si:ch211-117n7.8	71	46.768	ENSEBUG00000008902	si:ch211-117n7.8	95	46.768	Eptatretus_burgeri
ENSMZEG00005027369	si:ch211-117n7.8	94	50.307	ENSEASG00005003132	SRBD1	98	54.815	Equus_asinus_asinus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.147	ENSECAG00000013865	SRBD1	98	50.288	Equus_caballus
ENSMZEG00005027369	si:ch211-117n7.8	100	66.541	ENSELUG00000012592	si:ch211-117n7.8	100	66.129	Esox_lucius
ENSMZEG00005027369	si:ch211-117n7.8	83	56.860	ENSFCAG00000005101	SRBD1	84	56.577	Felis_catus
ENSMZEG00005027369	si:ch211-117n7.8	84	57.907	ENSFALG00000012966	SRBD1	96	53.774	Ficedula_albicollis
ENSMZEG00005027369	si:ch211-117n7.8	93	53.403	ENSFDAG00000016670	SRBD1	97	53.298	Fukomys_damarensis
ENSMZEG00005027369	si:ch211-117n7.8	100	80.780	ENSFHEG00000019480	si:ch211-117n7.8	100	80.195	Fundulus_heteroclitus
ENSMZEG00005027369	si:ch211-117n7.8	82	59.338	ENSGALG00000009990	SRBD1	97	52.813	Gallus_gallus
ENSMZEG00005027369	si:ch211-117n7.8	100	79.024	ENSGAFG00000019664	si:ch211-117n7.8	100	79.024	Gambusia_affinis
ENSMZEG00005027369	si:ch211-117n7.8	61	84.292	ENSGACG00000010794	si:ch211-117n7.8	100	84.292	Gasterosteus_aculeatus
ENSMZEG00005027369	si:ch211-117n7.8	82	59.059	ENSGAGG00000006166	SRBD1	99	58.706	Gopherus_agassizii
ENSMZEG00005027369	si:ch211-117n7.8	97	51.632	ENSGGOG00000005910	SRBD1	97	53.161	Gorilla_gorilla
ENSMZEG00005027369	si:ch211-117n7.8	97	81.388	ENSHBUG00000013207	si:ch211-117n7.8	100	81.388	Haplochromis_burtoni
ENSMZEG00005027369	si:ch211-117n7.8	82	57.515	ENSHGLG00000018153	-	96	52.929	Heterocephalus_glaber_female
ENSMZEG00005027369	si:ch211-117n7.8	82	57.515	ENSHGLG00100015183	-	96	52.929	Heterocephalus_glaber_male
ENSMZEG00005027369	si:ch211-117n7.8	100	63.894	ENSIPUG00000009661	srbd1	100	63.867	Ictalurus_punctatus
ENSMZEG00005027369	si:ch211-117n7.8	94	53.161	ENSSTOG00000005898	SRBD1	85	57.715	Ictidomys_tridecemlineatus
ENSMZEG00005027369	si:ch211-117n7.8	99	49.373	ENSJJAG00000022244	Srbd1	100	49.084	Jaculus_jaculus
ENSMZEG00005027369	si:ch211-117n7.8	99	81.720	ENSKMAG00000003473	si:ch211-117n7.8	100	81.623	Kryptolebias_marmoratus
ENSMZEG00005027369	si:ch211-117n7.8	100	80.901	ENSLBEG00000027518	si:ch211-117n7.8	100	80.607	Labrus_bergylta
ENSMZEG00005027369	si:ch211-117n7.8	83	58.275	ENSLACG00000009790	SRBD1	99	58.159	Latimeria_chalumnae
ENSMZEG00005027369	si:ch211-117n7.8	92	63.014	ENSLOCG00000016360	si:ch211-117n7.8	99	59.903	Lepisosteus_oculatus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.718	ENSMFAG00000042026	SRBD1	96	52.821	Macaca_fascicularis
ENSMZEG00005027369	si:ch211-117n7.8	93	52.464	ENSMMUG00000003490	SRBD1	96	52.361	Macaca_mulatta
ENSMZEG00005027369	si:ch211-117n7.8	94	51.077	ENSMNEG00000034701	SRBD1	96	51.179	Macaca_nemestrina
ENSMZEG00005027369	si:ch211-117n7.8	94	52.615	ENSMLEG00000000745	SRBD1	96	52.923	Mandrillus_leucophaeus
ENSMZEG00005027369	si:ch211-117n7.8	100	81.097	ENSMAMG00000021921	si:ch211-117n7.8	100	81.587	Mastacembelus_armatus
ENSMZEG00005027369	si:ch211-117n7.8	78	56.950	ENSMGAG00000010273	SRBD1	99	56.950	Meleagris_gallopavo
ENSMZEG00005027369	si:ch211-117n7.8	77	55.596	ENSMAUG00000013916	Srbd1	95	55.596	Mesocricetus_auratus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.863	ENSMICG00000007835	SRBD1	99	51.250	Microcebus_murinus
ENSMZEG00005027369	si:ch211-117n7.8	83	56.471	ENSMOCG00000018716	Srbd1	85	56.706	Microtus_ochrogaster
ENSMZEG00005027369	si:ch211-117n7.8	97	78.081	ENSMMOG00000007507	si:ch211-117n7.8	100	78.081	Mola_mola
ENSMZEG00005027369	si:ch211-117n7.8	100	81.445	ENSMALG00000001562	si:ch211-117n7.8	100	81.738	Monopterus_albus
ENSMZEG00005027369	si:ch211-117n7.8	92	52.610	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.882	Mus_caroli
ENSMZEG00005027369	si:ch211-117n7.8	92	52.401	ENSMUSG00000024135	Srbd1	96	56.343	Mus_musculus
ENSMZEG00005027369	si:ch211-117n7.8	92	52.033	MGP_PahariEiJ_G0020924	Srbd1	96	52.033	Mus_pahari
ENSMZEG00005027369	si:ch211-117n7.8	92	52.401	MGP_SPRETEiJ_G0022850	Srbd1	96	52.401	Mus_spretus
ENSMZEG00005027369	si:ch211-117n7.8	93	53.354	ENSMLUG00000007039	SRBD1	96	53.055	Myotis_lucifugus
ENSMZEG00005027369	si:ch211-117n7.8	99	49.481	ENSNGAG00000011893	Srbd1	99	49.252	Nannospalax_galili
ENSMZEG00005027369	si:ch211-117n7.8	98	92.108	ENSNBRG00000012873	si:ch211-117n7.8	100	92.108	Neolamprologus_brichardi
ENSMZEG00005027369	si:ch211-117n7.8	94	52.405	ENSNLEG00000016877	SRBD1	100	50.432	Nomascus_leucogenys
ENSMZEG00005027369	si:ch211-117n7.8	94	52.445	ENSODEG00000012095	SRBD1	85	56.243	Octodon_degus
ENSMZEG00005027369	si:ch211-117n7.8	100	98.531	ENSONIG00000000945	si:ch211-117n7.8	100	98.531	Oreochromis_niloticus
ENSMZEG00005027369	si:ch211-117n7.8	92	53.086	ENSOCUG00000015385	SRBD1	99	51.600	Oryctolagus_cuniculus
ENSMZEG00005027369	si:ch211-117n7.8	100	74.732	ENSORLG00000004427	si:ch211-117n7.8	100	74.732	Oryzias_latipes
ENSMZEG00005027369	si:ch211-117n7.8	100	77.605	ENSORLG00020012792	si:ch211-117n7.8	100	77.605	Oryzias_latipes_hni
ENSMZEG00005027369	si:ch211-117n7.8	100	77.388	ENSORLG00015018598	si:ch211-117n7.8	100	77.388	Oryzias_latipes_hsok
ENSMZEG00005027369	si:ch211-117n7.8	95	81.061	ENSOMEG00000012229	si:ch211-117n7.8	99	81.061	Oryzias_melastigma
ENSMZEG00005027369	si:ch211-117n7.8	98	50.147	ENSOGAG00000001076	SRBD1	96	50.924	Otolemur_garnettii
ENSMZEG00005027369	si:ch211-117n7.8	83	53.184	ENSOARG00000005958	SRBD1	99	47.623	Ovis_aries
ENSMZEG00005027369	si:ch211-117n7.8	94	52.508	ENSPPAG00000038442	SRBD1	99	50.532	Pan_paniscus
ENSMZEG00005027369	si:ch211-117n7.8	83	57.159	ENSPPRG00000003449	SRBD1	84	57.043	Panthera_pardus
ENSMZEG00005027369	si:ch211-117n7.8	83	57.159	ENSPTIG00000012495	SRBD1	84	57.043	Panthera_tigris_altaica
ENSMZEG00005027369	si:ch211-117n7.8	94	52.508	ENSPTRG00000011889	SRBD1	99	50.532	Pan_troglodytes
ENSMZEG00005027369	si:ch211-117n7.8	94	52.513	ENSPANG00000008063	SRBD1	96	52.567	Papio_anubis
ENSMZEG00005027369	si:ch211-117n7.8	99	61.456	ENSPKIG00000021973	si:ch211-117n7.8	99	61.030	Paramormyrops_kingsleyae
ENSMZEG00005027369	si:ch211-117n7.8	82	58.353	ENSPSIG00000008992	SRBD1	100	51.007	Pelodiscus_sinensis
ENSMZEG00005027369	si:ch211-117n7.8	98	73.626	ENSPMGG00000013348	si:ch211-117n7.8	99	73.826	Periophthalmus_magnuspinnatus
ENSMZEG00005027369	si:ch211-117n7.8	82	55.208	ENSPEMG00000020684	Srbd1	84	55.208	Peromyscus_maniculatus_bairdii
ENSMZEG00005027369	si:ch211-117n7.8	100	79.610	ENSPFOG00000010650	si:ch211-117n7.8	100	79.415	Poecilia_formosa
ENSMZEG00005027369	si:ch211-117n7.8	100	79.707	ENSPLAG00000002141	si:ch211-117n7.8	100	79.512	Poecilia_latipinna
ENSMZEG00005027369	si:ch211-117n7.8	100	79.707	ENSPMEG00000018537	si:ch211-117n7.8	100	79.512	Poecilia_mexicana
ENSMZEG00005027369	si:ch211-117n7.8	100	77.637	ENSPREG00000003258	si:ch211-117n7.8	100	77.441	Poecilia_reticulata
ENSMZEG00005027369	si:ch211-117n7.8	94	49.179	ENSPPYG00000012444	SRBD1	98	47.161	Pongo_abelii
ENSMZEG00005027369	si:ch211-117n7.8	74	52.094	ENSPCAG00000005629	SRBD1	80	51.832	Procavia_capensis
ENSMZEG00005027369	si:ch211-117n7.8	94	44.954	ENSPCOG00000017669	SRBD1	99	43.528	Propithecus_coquereli
ENSMZEG00005027369	si:ch211-117n7.8	88	47.983	ENSPVAG00000001782	SRBD1	100	44.732	Pteropus_vampyrus
ENSMZEG00005027369	si:ch211-117n7.8	97	90.332	ENSPNYG00000000508	si:ch211-117n7.8	100	90.332	Pundamilia_nyererei
ENSMZEG00005027369	si:ch211-117n7.8	94	66.667	ENSPNAG00000013492	SRBD1	97	65.365	Pygocentrus_nattereri
ENSMZEG00005027369	si:ch211-117n7.8	82	56.532	ENSRNOG00000014720	Srbd1	83	56.532	Rattus_norvegicus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.513	ENSRBIG00000033486	SRBD1	96	52.615	Rhinopithecus_bieti
ENSMZEG00005027369	si:ch211-117n7.8	94	52.513	ENSRROG00000041599	SRBD1	96	52.615	Rhinopithecus_roxellana
ENSMZEG00005027369	si:ch211-117n7.8	94	52.312	ENSSBOG00000024982	SRBD1	99	50.437	Saimiri_boliviensis_boliviensis
ENSMZEG00005027369	si:ch211-117n7.8	85	66.552	ENSSFOG00015001128	si:ch211-117n7.8	94	66.438	Scleropages_formosus
ENSMZEG00005027369	si:ch211-117n7.8	100	81.152	ENSSMAG00000018256	si:ch211-117n7.8	100	81.152	Scophthalmus_maximus
ENSMZEG00005027369	si:ch211-117n7.8	97	83.794	ENSSLDG00000023189	si:ch211-117n7.8	100	83.794	Seriola_lalandi_dorsalis
ENSMZEG00005027369	si:ch211-117n7.8	94	49.485	ENSSARG00000009740	SRBD1	96	49.009	Sorex_araneus
ENSMZEG00005027369	si:ch211-117n7.8	83	58.968	ENSSPUG00000010475	SRBD1	94	58.754	Sphenodon_punctatus
ENSMZEG00005027369	si:ch211-117n7.8	97	77.876	ENSSPAG00000008092	-	100	78.803	Stegastes_partitus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.744	ENSSSCG00000008445	SRBD1	98	50.575	Sus_scrofa
ENSMZEG00005027369	si:ch211-117n7.8	82	58.893	ENSTGUG00000003878	SRBD1	100	58.824	Taeniopygia_guttata
ENSMZEG00005027369	si:ch211-117n7.8	99	76.047	ENSTRUG00000007080	si:ch211-117n7.8	98	81.440	Takifugu_rubripes
ENSMZEG00005027369	si:ch211-117n7.8	98	74.361	ENSTNIG00000007464	si:ch211-117n7.8	98	73.772	Tetraodon_nigroviridis
ENSMZEG00005027369	si:ch211-117n7.8	66	80.851	ENSTBEG00000004556	SRBD1	64	80.851	Tupaia_belangeri
ENSMZEG00005027369	si:ch211-117n7.8	88	53.810	ENSTTRG00000011871	SRBD1	91	57.065	Tursiops_truncatus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.766	ENSUAMG00000008126	SRBD1	97	54.513	Ursus_americanus
ENSMZEG00005027369	si:ch211-117n7.8	94	52.766	ENSUMAG00000012902	SRBD1	97	51.163	Ursus_maritimus
ENSMZEG00005027369	si:ch211-117n7.8	83	56.461	ENSVPAG00000006825	SRBD1	93	55.749	Vicugna_pacos
ENSMZEG00005027369	si:ch211-117n7.8	94	52.984	ENSVVUG00000005389	SRBD1	100	50.918	Vulpes_vulpes
ENSMZEG00005027369	si:ch211-117n7.8	98	45.429	ENSXETG00000002760	srbd1	98	45.146	Xenopus_tropicalis
ENSMZEG00005027369	si:ch211-117n7.8	100	79.707	ENSXMAG00000016861	si:ch211-117n7.8	100	79.512	Xiphophorus_maculatus