EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027379 (Gene tree)
Gene ID: 101467257
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 59117 bases
Position: chrLG13:9763365-9822481
Accession: 101467257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005036721	PPR	PF01535.20	2.3e-34	1	6
ENSMZEP00005036721	PPR	PF01535.20	2.3e-34	2	6
ENSMZEP00005036721	PPR	PF01535.20	2.3e-34	3	6
ENSMZEP00005036721	PPR	PF01535.20	2.3e-34	4	6
ENSMZEP00005036721	PPR	PF01535.20	2.3e-34	5	6
ENSMZEP00005036721	PPR	PF01535.20	2.3e-34	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038008	-	5259	XM_004570095	ENSMZEP00005036721	1431 (aa)	XP_004570152	UPI000D2FD23E

Gene Model

Click here to download ENSMZEG00005027379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027379	lrpprc	99	80.799	ENSAPOG00000016610	lrpprc	100	80.799	Acanthochromis_polyacanthus
ENSMZEG00005027379	lrpprc	96	52.597	ENSAMEG00000005852	LRPPRC	99	52.597	Ailuropoda_melanoleuca
ENSMZEG00005027379	lrpprc	100	83.298	ENSACIG00000009604	lrpprc	100	83.298	Amphilophus_citrinellus
ENSMZEG00005027379	lrpprc	99	81.399	ENSAOCG00000005886	lrpprc	100	81.399	Amphiprion_ocellaris
ENSMZEG00005027379	lrpprc	99	76.768	ENSAPEG00000002937	lrpprc	99	76.768	Amphiprion_percula
ENSMZEG00005027379	lrpprc	99	74.168	ENSATEG00000010555	lrpprc	100	74.168	Anabas_testudineus
ENSMZEG00005027379	lrpprc	94	57.342	ENSACAG00000029278	LRPPRC	100	55.656	Anolis_carolinensis
ENSMZEG00005027379	lrpprc	99	51.399	ENSANAG00000027440	LRPPRC	97	55.576	Aotus_nancymaae
ENSMZEG00005027379	lrpprc	96	87.536	ENSACLG00000023712	lrpprc	92	95.349	Astatotilapia_calliptera
ENSMZEG00005027379	lrpprc	94	52.203	ENSCJAG00000000794	LRPPRC	96	52.276	Callithrix_jacchus
ENSMZEG00005027379	lrpprc	97	52.511	ENSCHIG00000020173	LRPPRC	99	51.997	Capra_hircus
ENSMZEG00005027379	lrpprc	93	42.285	ENSCAPG00000013631	LRPPRC	97	42.433	Cavia_aperea
ENSMZEG00005027379	lrpprc	85	50.860	ENSCPOG00000000204	LRPPRC	99	50.860	Cavia_porcellus
ENSMZEG00005027379	lrpprc	99	51.082	ENSCCAG00000031900	LRPPRC	97	55.823	Cebus_capucinus
ENSMZEG00005027379	lrpprc	96	52.092	ENSCATG00000014187	LRPPRC	98	55.433	Cercocebus_atys
ENSMZEG00005027379	lrpprc	92	51.805	ENSCLAG00000005203	LRPPRC	94	51.805	Chinchilla_lanigera
ENSMZEG00005027379	lrpprc	96	52.422	ENSCSAG00000013233	LRPPRC	98	52.347	Chlorocebus_sabaeus
ENSMZEG00005027379	lrpprc	84	50.993	ENSCHOG00000003631	LRPPRC	84	50.993	Choloepus_hoffmanni
ENSMZEG00005027379	lrpprc	94	50.773	ENSCANG00000034961	LRPPRC	99	60.068	Colobus_angolensis_palliatus
ENSMZEG00005027379	lrpprc	99	50.774	ENSCGRG00001016261	Lrpprc	99	51.195	Cricetulus_griseus_chok1gshd
ENSMZEG00005027379	lrpprc	99	50.774	ENSCGRG00000004072	Lrpprc	99	51.195	Cricetulus_griseus_crigri
ENSMZEG00005027379	lrpprc	100	53.677	ENSCSEG00000003850	lrpprc	96	60.234	Cynoglossus_semilaevis
ENSMZEG00005027379	lrpprc	99	80.070	ENSCVAG00000012967	lrpprc	100	80.070	Cyprinodon_variegatus
ENSMZEG00005027379	lrpprc	99	59.653	ENSDARG00000043970	lrpprc	98	59.653	Danio_rerio
ENSMZEG00005027379	lrpprc	99	51.332	ENSDNOG00000012594	-	99	51.332	Dasypus_novemcinctus
ENSMZEG00005027379	lrpprc	78	41.608	ENSDNOG00000032336	-	97	41.608	Dasypus_novemcinctus
ENSMZEG00005027379	lrpprc	95	52.816	ENSDORG00000012233	Lrpprc	99	51.821	Dipodomys_ordii
ENSMZEG00005027379	lrpprc	94	52.624	ENSETEG00000006657	LRPPRC	99	51.404	Echinops_telfairi
ENSMZEG00005027379	lrpprc	73	54.975	ENSEEUG00000012340	LRPPRC	80	54.975	Erinaceus_europaeus
ENSMZEG00005027379	lrpprc	94	60.147	ENSELUG00000012803	lrpprc	99	60.147	Esox_lucius
ENSMZEG00005027379	lrpprc	99	52.706	ENSFCAG00000013468	LRPPRC	99	52.982	Felis_catus
ENSMZEG00005027379	lrpprc	94	50.594	ENSFALG00000012738	LRPPRC	99	50.594	Ficedula_albicollis
ENSMZEG00005027379	lrpprc	99	49.895	ENSFDAG00000015328	LRPPRC	99	49.895	Fukomys_damarensis
ENSMZEG00005027379	lrpprc	99	78.526	ENSFHEG00000019604	lrpprc	100	78.526	Fundulus_heteroclitus
ENSMZEG00005027379	lrpprc	99	64.427	ENSGMOG00000008337	lrpprc	99	64.427	Gadus_morhua
ENSMZEG00005027379	lrpprc	99	76.247	ENSGAFG00000001455	lrpprc	100	76.247	Gambusia_affinis
ENSMZEG00005027379	lrpprc	99	73.843	ENSGACG00000010679	lrpprc	100	76.827	Gasterosteus_aculeatus
ENSMZEG00005027379	lrpprc	100	98.952	ENSHBUG00000000393	lrpprc	98	98.952	Haplochromis_burtoni
ENSMZEG00005027379	lrpprc	99	49.719	ENSHGLG00000006123	LRPPRC	99	49.648	Heterocephalus_glaber_female
ENSMZEG00005027379	lrpprc	59	48.521	ENSHGLG00100005960	-	99	48.402	Heterocephalus_glaber_male
ENSMZEG00005027379	lrpprc	99	74.026	ENSHCOG00000002107	lrpprc	100	74.026	Hippocampus_comes
ENSMZEG00005027379	lrpprc	99	64.400	ENSIPUG00000009406	lrpprc	99	64.400	Ictalurus_punctatus
ENSMZEG00005027379	lrpprc	99	51.264	ENSSTOG00000011185	LRPPRC	99	51.404	Ictidomys_tridecemlineatus
ENSMZEG00005027379	lrpprc	96	51.599	ENSJJAG00000020475	Lrpprc	100	50.772	Jaculus_jaculus
ENSMZEG00005027379	lrpprc	98	66.074	ENSKMAG00000003287	lrpprc	85	66.074	Kryptolebias_marmoratus
ENSMZEG00005027379	lrpprc	99	65.712	ENSLBEG00000023225	lrpprc	98	71.780	Labrus_bergylta
ENSMZEG00005027379	lrpprc	99	59.569	ENSLACG00000014030	LRPPRC	99	59.569	Latimeria_chalumnae
ENSMZEG00005027379	lrpprc	98	62.911	ENSLOCG00000016390	lrpprc	97	62.911	Lepisosteus_oculatus
ENSMZEG00005027379	lrpprc	99	49.441	ENSLAFG00000008614	LRPPRC	99	49.441	Loxodonta_africana
ENSMZEG00005027379	lrpprc	96	52.092	ENSMFAG00000041560	LRPPRC	99	58.632	Macaca_fascicularis
ENSMZEG00005027379	lrpprc	96	51.299	ENSMMUG00000019841	LRPPRC	99	55.389	Macaca_mulatta
ENSMZEG00005027379	lrpprc	96	52.165	ENSMNEG00000031613	LRPPRC	98	55.433	Macaca_nemestrina
ENSMZEG00005027379	lrpprc	98	66.453	ENSMAMG00000021835	lrpprc	98	66.785	Mastacembelus_armatus
ENSMZEG00005027379	lrpprc	99	50.526	ENSMAUG00000012118	Lrpprc	99	51.515	Mesocricetus_auratus
ENSMZEG00005027379	lrpprc	99	51.821	ENSMICG00000010486	LRPPRC	98	55.638	Microcebus_murinus
ENSMZEG00005027379	lrpprc	99	51.195	ENSMOCG00000006048	Lrpprc	99	51.195	Microtus_ochrogaster
ENSMZEG00005027379	lrpprc	99	71.439	ENSMMOG00000007830	lrpprc	94	78.278	Mola_mola
ENSMZEG00005027379	lrpprc	93	53.130	ENSMODG00000000648	LRPPRC	98	53.130	Monodelphis_domestica
ENSMZEG00005027379	lrpprc	100	72.784	ENSMALG00000001271	lrpprc	100	72.784	Monopterus_albus
ENSMZEG00005027379	lrpprc	93	55.642	ENSMPUG00000011800	LRPPRC	99	54.034	Mustela_putorius_furo
ENSMZEG00005027379	lrpprc	94	53.176	ENSMLUG00000010575	LRPPRC	99	51.753	Myotis_lucifugus
ENSMZEG00005027379	lrpprc	99	51.445	ENSNGAG00000013069	Lrpprc	99	51.445	Nannospalax_galili
ENSMZEG00005027379	lrpprc	94	84.873	ENSNBRG00000013202	lrpprc	100	85.022	Neolamprologus_brichardi
ENSMZEG00005027379	lrpprc	99	50.279	ENSNLEG00000016782	LRPPRC	99	54.137	Nomascus_leucogenys
ENSMZEG00005027379	lrpprc	87	55.000	ENSOPRG00000016774	LRPPRC	89	55.000	Ochotona_princeps
ENSMZEG00005027379	lrpprc	94	52.148	ENSODEG00000011211	LRPPRC	95	52.148	Octodon_degus
ENSMZEG00005027379	lrpprc	100	97.205	ENSONIG00000000917	lrpprc	97	97.205	Oreochromis_niloticus
ENSMZEG00005027379	lrpprc	75	48.148	ENSOANG00000014670	-	100	47.954	Ornithorhynchus_anatinus
ENSMZEG00005027379	lrpprc	99	52.104	ENSOCUG00000015046	LRPPRC	96	52.244	Oryctolagus_cuniculus
ENSMZEG00005027379	lrpprc	100	73.291	ENSORLG00000004605	lrpprc	97	73.501	Oryzias_latipes
ENSMZEG00005027379	lrpprc	91	77.709	ENSORLG00020012536	lrpprc	99	77.468	Oryzias_latipes_hni
ENSMZEG00005027379	lrpprc	94	76.459	ENSORLG00015018270	lrpprc	99	76.459	Oryzias_latipes_hsok
ENSMZEG00005027379	lrpprc	95	52.655	ENSOGAG00000012798	LRPPRC	99	52.110	Otolemur_garnettii
ENSMZEG00005027379	lrpprc	94	53.511	ENSOARG00000006522	LRPPRC	99	51.997	Ovis_aries
ENSMZEG00005027379	lrpprc	96	50.398	ENSPPAG00000040876	LRPPRC	97	54.597	Pan_paniscus
ENSMZEG00005027379	lrpprc	99	52.424	ENSPPRG00000006578	LRPPRC	99	52.702	Panthera_pardus
ENSMZEG00005027379	lrpprc	94	54.102	ENSPTIG00000000933	LRPPRC	96	54.102	Panthera_tigris_altaica
ENSMZEG00005027379	lrpprc	99	50.421	ENSPTRG00000011880	LRPPRC	97	54.511	Pan_troglodytes
ENSMZEG00005027379	lrpprc	96	51.732	ENSPANG00000020731	LRPPRC	98	55.064	Papio_anubis
ENSMZEG00005027379	lrpprc	94	50.110	ENSPKIG00000022232	lrpprc	97	58.594	Paramormyrops_kingsleyae
ENSMZEG00005027379	lrpprc	61	55.290	ENSPSIG00000006830	-	99	56.086	Pelodiscus_sinensis
ENSMZEG00005027379	lrpprc	68	63.975	ENSPMGG00000016597	lrpprc	99	63.975	Periophthalmus_magnuspinnatus
ENSMZEG00005027379	lrpprc	93	46.777	ENSPMAG00000002147	lrpprc	100	46.777	Petromyzon_marinus
ENSMZEG00005027379	lrpprc	99	75.755	ENSPFOG00000011227	lrpprc	100	75.755	Poecilia_formosa
ENSMZEG00005027379	lrpprc	99	75.896	ENSPLAG00000004018	lrpprc	100	75.896	Poecilia_latipinna
ENSMZEG00005027379	lrpprc	99	75.685	ENSPMEG00000016425	lrpprc	100	75.685	Poecilia_mexicana
ENSMZEG00005027379	lrpprc	99	75.725	ENSPREG00000003662	lrpprc	99	75.725	Poecilia_reticulata
ENSMZEG00005027379	lrpprc	57	48.348	ENSPPYG00000029532	-	100	48.348	Pongo_abelii
ENSMZEG00005027379	lrpprc	78	55.307	ENSPCAG00000001430	LRPPRC	80	55.229	Procavia_capensis
ENSMZEG00005027379	lrpprc	99	50.282	ENSPVAG00000002007	LRPPRC	99	50.282	Pteropus_vampyrus
ENSMZEG00005027379	lrpprc	99	82.672	ENSPNYG00000000756	lrpprc	100	82.672	Pundamilia_nyererei
ENSMZEG00005027379	lrpprc	99	66.295	ENSPNAG00000002895	lrpprc	99	66.295	Pygocentrus_nattereri
ENSMZEG00005027379	lrpprc	94	51.627	ENSRNOG00000005877	Lrpprc	96	51.627	Rattus_norvegicus
ENSMZEG00005027379	lrpprc	96	50.863	ENSRBIG00000031552	LRPPRC	100	50.104	Rhinopithecus_bieti
ENSMZEG00005027379	lrpprc	99	50.769	ENSSBOG00000011807	LRPPRC	97	55.019	Saimiri_boliviensis_boliviensis
ENSMZEG00005027379	lrpprc	93	52.577	ENSSHAG00000018725	LRPPRC	98	52.577	Sarcophilus_harrisii
ENSMZEG00005027379	lrpprc	99	57.467	ENSSFOG00015001042	lrpprc	99	57.467	Scleropages_formosus
ENSMZEG00005027379	lrpprc	100	76.151	ENSSDUG00000019062	lrpprc	100	76.151	Seriola_dumerili
ENSMZEG00005027379	lrpprc	99	57.291	ENSSLDG00000023028	lrpprc	100	57.498	Seriola_lalandi_dorsalis
ENSMZEG00005027379	lrpprc	89	49.797	ENSSARG00000000426	LRPPRC	99	49.797	Sorex_araneus
ENSMZEG00005027379	lrpprc	99	68.468	ENSSPAG00000000162	lrpprc	100	68.538	Stegastes_partitus
ENSMZEG00005027379	lrpprc	99	51.435	ENSSSCG00000008452	LRPPRC	99	51.435	Sus_scrofa
ENSMZEG00005027379	lrpprc	93	49.175	ENSTGUG00000003759	LRPPRC	100	49.175	Taeniopygia_guttata
ENSMZEG00005027379	lrpprc	99	73.390	ENSTRUG00000008409	lrpprc	97	73.390	Takifugu_rubripes
ENSMZEG00005027379	lrpprc	99	71.138	ENSTNIG00000007470	lrpprc	100	72.727	Tetraodon_nigroviridis
ENSMZEG00005027379	lrpprc	94	51.811	ENSTTRG00000006403	LRPPRC	99	50.492	Tursiops_truncatus
ENSMZEG00005027379	lrpprc	94	49.631	ENSVPAG00000008993	LRPPRC	99	49.631	Vicugna_pacos
ENSMZEG00005027379	lrpprc	94	58.954	ENSXETG00000009296	lrpprc	97	59.027	Xenopus_tropicalis
ENSMZEG00005027379	lrpprc	98	69.417	ENSXCOG00000013343	lrpprc	97	70.250	Xiphophorus_couchianus
ENSMZEG00005027379	lrpprc	99	75.896	ENSXMAG00000018108	lrpprc	100	75.896	Xiphophorus_maculatus