EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027394 (Gene tree)
Gene ID: 101477366
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 8491 bases
Position: chrLG13:10238782-10247272
Accession: 101477366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005036740	zf-C2H2	PF00096.26	2.7e-13	1	3
ENSMZEP00005036740	zf-C2H2	PF00096.26	2.7e-13	2	3
ENSMZEP00005036740	zf-C2H2	PF00096.26	2.7e-13	3	3
ENSMZEP00005036739	zf-C2H2	PF00096.26	2.5e-12	1	3
ENSMZEP00005036739	zf-C2H2	PF00096.26	2.5e-12	2	3
ENSMZEP00005036739	zf-C2H2	PF00096.26	2.5e-12	3	3
ENSMZEP00005036739	zf-met	PF12874.7	3.1e-05	1	1
ENSMZEP00005036740	zf-met	PF12874.7	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038026	-	5762	XM_004551426	ENSMZEP00005036739	576 (aa)	XP_004551483	UPI000329A2AD
ENSMZET00005038027	-	5275	XM_004551425	ENSMZEP00005036740	584 (aa)	XP_004551482	UPI00032A2F1F

Gene Model

Click here to download ENSMZEG00005027394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027394's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027394	zbtb18	100	96.891	ENSAPOG00000005168	zbtb18	100	96.891	Acanthochromis_polyacanthus
ENSMZEG00005027394	zbtb18	99	87.544	ENSACIG00000008655	zbtb18	100	87.086	Amphilophus_citrinellus
ENSMZEG00005027394	zbtb18	100	97.274	ENSAOCG00000014105	zbtb18	100	97.274	Amphiprion_ocellaris
ENSMZEG00005027394	zbtb18	100	96.735	ENSAPEG00000003817	zbtb18	79	96.735	Amphiprion_percula
ENSMZEG00005027394	zbtb18	100	96.007	ENSATEG00000010192	zbtb18	100	96.007	Anabas_testudineus
ENSMZEG00005027394	zbtb18	100	100.000	ENSACLG00000022978	zbtb18	100	100.000	Astatotilapia_calliptera
ENSMZEG00005027394	zbtb18	99	73.083	ENSAMXG00000042119	zbtb18	99	72.232	Astyanax_mexicanus
ENSMZEG00005027394	zbtb18	100	93.322	ENSCSEG00000003083	zbtb18	100	93.322	Cynoglossus_semilaevis
ENSMZEG00005027394	zbtb18	100	94.349	ENSCVAG00000016785	zbtb18	100	94.349	Cyprinodon_variegatus
ENSMZEG00005027394	zbtb18	98	71.728	ENSDARG00000028228	zbtb18	100	73.298	Danio_rerio
ENSMZEG00005027394	zbtb18	100	75.387	ENSELUG00000013471	zbtb18	100	74.699	Esox_lucius
ENSMZEG00005027394	zbtb18	99	94.251	ENSFHEG00000020005	zbtb18	99	94.251	Fundulus_heteroclitus
ENSMZEG00005027394	zbtb18	55	95.420	ENSGMOG00000018718	zbtb18	60	91.795	Gadus_morhua
ENSMZEG00005027394	zbtb18	99	91.812	ENSGAFG00000000619	zbtb18	99	91.812	Gambusia_affinis
ENSMZEG00005027394	zbtb18	100	90.451	ENSGACG00000010518	zbtb18	97	90.625	Gasterosteus_aculeatus
ENSMZEG00005027394	zbtb18	100	100.000	ENSHBUG00000013654	zbtb18	100	100.000	Haplochromis_burtoni
ENSMZEG00005027394	zbtb18	54	88.710	ENSHCOG00000002345	zbtb18	94	88.710	Hippocampus_comes
ENSMZEG00005027394	zbtb18	100	65.936	ENSIPUG00000008912	zbtb18	99	65.972	Ictalurus_punctatus
ENSMZEG00005027394	zbtb18	100	96.575	ENSKMAG00000002780	zbtb18	100	96.575	Kryptolebias_marmoratus
ENSMZEG00005027394	zbtb18	100	94.444	ENSLBEG00000014796	zbtb18	100	94.444	Labrus_bergylta
ENSMZEG00005027394	zbtb18	84	60.400	ENSMFAG00000033326	ZBTB18	99	58.918	Macaca_fascicularis
ENSMZEG00005027394	zbtb18	84	60.721	ENSMMUG00000015664	ZBTB18	100	59.229	Macaca_mulatta
ENSMZEG00005027394	zbtb18	100	96.875	ENSMAMG00000021720	zbtb18	100	96.875	Mastacembelus_armatus
ENSMZEG00005027394	zbtb18	94	50.919	ENSMGAG00000015389	-	100	50.462	Meleagris_gallopavo
ENSMZEG00005027394	zbtb18	98	87.809	ENSMMOG00000007888	zbtb18	99	87.809	Mola_mola
ENSMZEG00005027394	zbtb18	100	95.312	ENSMALG00000000725	zbtb18	100	95.312	Monopterus_albus
ENSMZEG00005027394	zbtb18	98	99.292	ENSNBRG00000013796	zbtb18	100	99.292	Neolamprologus_brichardi
ENSMZEG00005027394	zbtb18	100	99.306	ENSONIG00000000862	zbtb18	100	99.306	Oreochromis_niloticus
ENSMZEG00005027394	zbtb18	100	94.178	ENSORLG00000027425	zbtb18	100	94.178	Oryzias_latipes
ENSMZEG00005027394	zbtb18	100	94.349	ENSORLG00020011988	zbtb18	100	94.349	Oryzias_latipes_hni
ENSMZEG00005027394	zbtb18	100	94.178	ENSORLG00015017457	zbtb18	100	94.178	Oryzias_latipes_hsok
ENSMZEG00005027394	zbtb18	100	94.692	ENSOMEG00000011249	zbtb18	100	94.692	Oryzias_melastigma
ENSMZEG00005027394	zbtb18	98	55.268	ENSPKIG00000008787	-	100	55.363	Paramormyrops_kingsleyae
ENSMZEG00005027394	zbtb18	99	70.000	ENSPKIG00000021964	zbtb18	96	70.377	Paramormyrops_kingsleyae
ENSMZEG00005027394	zbtb18	98	83.186	ENSPMGG00000008020	zbtb18	100	83.186	Periophthalmus_magnuspinnatus
ENSMZEG00005027394	zbtb18	98	91.519	ENSPFOG00000022080	zbtb18	100	91.519	Poecilia_formosa
ENSMZEG00005027394	zbtb18	98	85.866	ENSPLAG00000011299	-	100	85.866	Poecilia_latipinna
ENSMZEG00005027394	zbtb18	98	85.866	ENSPLAG00000020960	zbtb18	100	85.866	Poecilia_latipinna
ENSMZEG00005027394	zbtb18	98	92.403	ENSPMEG00000007554	zbtb18	100	92.403	Poecilia_mexicana
ENSMZEG00005027394	zbtb18	100	92.821	ENSPREG00000008576	zbtb18	100	92.821	Poecilia_reticulata
ENSMZEG00005027394	zbtb18	100	100.000	ENSPNYG00000001530	zbtb18	100	100.000	Pundamilia_nyererei
ENSMZEG00005027394	zbtb18	86	70.727	ENSPNAG00000014066	zbtb18	88	68.130	Pygocentrus_nattereri
ENSMZEG00005027394	zbtb18	98	94.336	ENSSMAG00000018041	zbtb18	100	93.805	Scophthalmus_maximus
ENSMZEG00005027394	zbtb18	98	97.168	ENSSDUG00000018660	zbtb18	100	97.168	Seriola_dumerili
ENSMZEG00005027394	zbtb18	98	97.168	ENSSLDG00000022573	zbtb18	100	97.168	Seriola_lalandi_dorsalis
ENSMZEG00005027394	zbtb18	94	46.886	ENSSPUG00000010554	-	100	50.549	Sphenodon_punctatus
ENSMZEG00005027394	zbtb18	100	97.396	ENSSPAG00000002691	zbtb18	100	97.396	Stegastes_partitus
ENSMZEG00005027394	zbtb18	98	93.982	ENSTRUG00000020604	zbtb18	100	93.982	Takifugu_rubripes
ENSMZEG00005027394	zbtb18	99	85.913	ENSTNIG00000000430	zbtb18	99	86.213	Tetraodon_nigroviridis
ENSMZEG00005027394	zbtb18	98	86.749	ENSXCOG00000013308	zbtb18	100	87.633	Xiphophorus_couchianus
ENSMZEG00005027394	zbtb18	99	83.187	ENSXMAG00000018241	zbtb18	99	83.187	Xiphophorus_maculatus