EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027407 (Gene tree)
Gene ID: -
Gene Symbol: sf3b5 (1 of many)
Alias: Splicing factor 3B subunit 10|si:ch211-8a9.5|zgc:92874
Full Name: splicing factor 3B subunit 5-like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 259 bases
Position: chrLG13:10766505-10766763
Accession: 112435761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005036765	SF3b10	PF07189.11	6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038052	-	228	XM_024804766	ENSMZEP00005036765	75 (aa)	XP_024660534	-

Gene Model

Click here to download ENSMZEG00005027407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027407's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027407	sf3b5	99	82.353	ENSG00000169976	SF3B5	99	82.353	Homo_sapiens
ENSMZEG00005027407	sf3b5	100	87.209	ENSAPOG00000001721	sf3b5	100	87.209	Acanthochromis_polyacanthus
ENSMZEG00005027407	sf3b5	100	87.209	ENSACIG00000008106	sf3b5	100	87.209	Amphilophus_citrinellus
ENSMZEG00005027407	sf3b5	100	87.209	ENSAOCG00000023367	sf3b5	100	87.209	Amphiprion_ocellaris
ENSMZEG00005027407	sf3b5	100	87.209	ENSAPEG00000004605	sf3b5	100	87.209	Amphiprion_percula
ENSMZEG00005027407	sf3b5	100	87.209	ENSATEG00000009720	sf3b5	100	87.209	Anabas_testudineus
ENSMZEG00005027407	sf3b5	100	82.558	ENSACAG00000007948	SF3B5	100	82.558	Anolis_carolinensis
ENSMZEG00005027407	sf3b5	99	82.353	ENSANAG00000019999	SF3B5	99	82.353	Aotus_nancymaae
ENSMZEG00005027407	sf3b5	100	87.209	ENSACLG00000022410	sf3b5	100	87.209	Astatotilapia_calliptera
ENSMZEG00005027407	sf3b5	99	82.353	ENSBTAG00000009795	SF3B5	99	82.353	Bos_taurus
ENSMZEG00005027407	sf3b5	99	82.353	ENSCJAG00000046566	SF3B5	99	82.353	Callithrix_jacchus
ENSMZEG00005027407	sf3b5	99	82.353	ENSCAFG00000032495	SF3B5	99	82.353	Canis_familiaris
ENSMZEG00005027407	sf3b5	99	82.353	ENSCAFG00020000873	SF3B5	99	82.353	Canis_lupus_dingo
ENSMZEG00005027407	sf3b5	99	82.353	ENSCHIG00000007987	SF3B5	99	82.353	Capra_hircus
ENSMZEG00005027407	sf3b5	99	82.353	ENSTSYG00000012236	SF3B5	99	82.353	Carlito_syrichta
ENSMZEG00005027407	sf3b5	99	82.353	ENSCPOG00000012435	SF3B5	99	82.353	Cavia_porcellus
ENSMZEG00005027407	sf3b5	99	82.353	ENSCCAG00000006528	SF3B5	99	82.353	Cebus_capucinus
ENSMZEG00005027407	sf3b5	99	82.353	ENSCATG00000010192	SF3B5	99	82.353	Cercocebus_atys
ENSMZEG00005027407	sf3b5	99	82.353	ENSCLAG00000017802	SF3B5	99	82.353	Chinchilla_lanigera
ENSMZEG00005027407	sf3b5	99	82.353	ENSCSAG00000000187	SF3B5	99	82.353	Chlorocebus_sabaeus
ENSMZEG00005027407	sf3b5	100	81.395	ENSCPBG00000017148	SF3B5	100	81.395	Chrysemys_picta_bellii
ENSMZEG00005027407	sf3b5	97	64.286	ENSCING00000021953	-	98	64.286	Ciona_intestinalis
ENSMZEG00005027407	sf3b5	99	82.353	ENSCANG00000002639	SF3B5	99	82.353	Colobus_angolensis_palliatus
ENSMZEG00005027407	sf3b5	99	81.176	ENSCGRG00001007249	Sf3b5	99	81.176	Cricetulus_griseus_chok1gshd
ENSMZEG00005027407	sf3b5	99	81.176	ENSCGRG00000019185	Sf3b5	99	81.176	Cricetulus_griseus_crigri
ENSMZEG00005027407	sf3b5	100	86.047	ENSCSEG00000003216	sf3b5	100	86.047	Cynoglossus_semilaevis
ENSMZEG00005027407	sf3b5	100	87.209	ENSCVAG00000005040	sf3b5	100	87.209	Cyprinodon_variegatus
ENSMZEG00005027407	sf3b5	100	86.047	ENSDARG00000016855	sf3b5	100	86.047	Danio_rerio
ENSMZEG00005027407	sf3b5	99	82.353	ENSDNOG00000048829	SF3B5	81	82.353	Dasypus_novemcinctus
ENSMZEG00005027407	sf3b5	99	82.353	ENSDORG00000005838	Sf3b5	99	82.353	Dipodomys_ordii
ENSMZEG00005027407	sf3b5	99	70.588	FBgn0040534	Sf3b5	100	70.588	Drosophila_melanogaster
ENSMZEG00005027407	sf3b5	99	82.353	ENSETEG00000004047	SF3B5	99	82.353	Echinops_telfairi
ENSMZEG00005027407	sf3b5	99	75.294	ENSEBUG00000002311	sf3b5	100	75.294	Eptatretus_burgeri
ENSMZEG00005027407	sf3b5	99	82.353	ENSEASG00005009522	SF3B5	99	82.353	Equus_asinus_asinus
ENSMZEG00005027407	sf3b5	99	82.353	ENSECAG00000005457	SF3B5	99	82.353	Equus_caballus
ENSMZEG00005027407	sf3b5	100	86.047	ENSELUG00000014290	SF3B5	100	86.047	Esox_lucius
ENSMZEG00005027407	sf3b5	99	82.353	ENSFCAG00000000936	SF3B5	99	82.353	Felis_catus
ENSMZEG00005027407	sf3b5	100	80.233	ENSFALG00000015012	SF3B5	100	80.233	Ficedula_albicollis
ENSMZEG00005027407	sf3b5	99	82.353	ENSFDAG00000003664	SF3B5	99	82.353	Fukomys_damarensis
ENSMZEG00005027407	sf3b5	100	87.209	ENSFHEG00000020301	sf3b5	100	87.209	Fundulus_heteroclitus
ENSMZEG00005027407	sf3b5	100	86.047	ENSGMOG00000019972	sf3b5	100	86.047	Gadus_morhua
ENSMZEG00005027407	sf3b5	100	82.558	ENSGALG00000030824	SF3B5	100	82.558	Gallus_gallus
ENSMZEG00005027407	sf3b5	100	87.209	ENSGAFG00000000271	sf3b5	100	87.209	Gambusia_affinis
ENSMZEG00005027407	sf3b5	100	87.209	ENSGACG00000010363	sf3b5	100	87.209	Gasterosteus_aculeatus
ENSMZEG00005027407	sf3b5	100	81.395	ENSGAGG00000011434	SF3B5	100	81.395	Gopherus_agassizii
ENSMZEG00005027407	sf3b5	100	76.744	ENSGAGG00000000646	-	100	76.744	Gopherus_agassizii
ENSMZEG00005027407	sf3b5	99	82.353	ENSGGOG00000001537	SF3B5	99	82.353	Gorilla_gorilla
ENSMZEG00005027407	sf3b5	100	87.209	ENSHBUG00000008925	sf3b5	100	87.209	Haplochromis_burtoni
ENSMZEG00005027407	sf3b5	99	82.353	ENSHGLG00000021406	SF3B5	99	82.353	Heterocephalus_glaber_female
ENSMZEG00005027407	sf3b5	99	82.353	ENSHGLG00100020370	SF3B5	99	82.353	Heterocephalus_glaber_male
ENSMZEG00005027407	sf3b5	100	86.047	ENSHCOG00000016806	sf3b5	100	86.047	Hippocampus_comes
ENSMZEG00005027407	sf3b5	100	86.047	ENSHCOG00000016802	sf3b5	100	86.047	Hippocampus_comes
ENSMZEG00005027407	sf3b5	100	86.047	ENSHCOG00000009115	-	100	86.047	Hippocampus_comes
ENSMZEG00005027407	sf3b5	100	84.884	ENSIPUG00000015166	sf3b5	100	84.884	Ictalurus_punctatus
ENSMZEG00005027407	sf3b5	99	82.353	ENSSTOG00000003347	SF3B5	99	82.353	Ictidomys_tridecemlineatus
ENSMZEG00005027407	sf3b5	99	82.353	ENSJJAG00000001857	Sf3b5	99	82.353	Jaculus_jaculus
ENSMZEG00005027407	sf3b5	100	87.209	ENSKMAG00000002249	sf3b5	100	87.209	Kryptolebias_marmoratus
ENSMZEG00005027407	sf3b5	100	87.209	ENSLBEG00000019847	sf3b5	100	87.209	Labrus_bergylta
ENSMZEG00005027407	sf3b5	100	80.233	ENSLACG00000000946	SF3B5	100	80.233	Latimeria_chalumnae
ENSMZEG00005027407	sf3b5	100	86.047	ENSLOCG00000017352	sf3b5	100	86.047	Lepisosteus_oculatus
ENSMZEG00005027407	sf3b5	99	82.353	ENSLAFG00000032489	SF3B5	99	82.353	Loxodonta_africana
ENSMZEG00005027407	sf3b5	99	82.353	ENSMFAG00000029753	SF3B5	99	82.353	Macaca_fascicularis
ENSMZEG00005027407	sf3b5	99	82.353	ENSMMUG00000047691	SF3B5	99	82.353	Macaca_mulatta
ENSMZEG00005027407	sf3b5	99	82.353	ENSMNEG00000028236	SF3B5	99	82.353	Macaca_nemestrina
ENSMZEG00005027407	sf3b5	99	82.353	ENSMLEG00000007622	SF3B5	99	82.353	Mandrillus_leucophaeus
ENSMZEG00005027407	sf3b5	100	87.209	ENSMAMG00000021639	sf3b5	100	87.209	Mastacembelus_armatus
ENSMZEG00005027407	sf3b5	100	87.209	ENSMZEG00005028115	SF3B5	100	87.209	Maylandia_zebra
ENSMZEG00005027407	sf3b5	100	87.209	ENSMZEG00005027408	sf3b5	100	87.209	Maylandia_zebra
ENSMZEG00005027407	sf3b5	100	82.558	ENSMGAG00000015849	SF3B5	100	82.558	Meleagris_gallopavo
ENSMZEG00005027407	sf3b5	99	81.176	ENSMAUG00000008283	Sf3b5	99	81.176	Mesocricetus_auratus
ENSMZEG00005027407	sf3b5	99	82.353	ENSMICG00000014922	SF3B5	99	82.353	Microcebus_murinus
ENSMZEG00005027407	sf3b5	99	81.176	ENSMOCG00000001713	Sf3b5	99	81.176	Microtus_ochrogaster
ENSMZEG00005027407	sf3b5	100	87.209	ENSMMOG00000007956	sf3b5	100	87.209	Mola_mola
ENSMZEG00005027407	sf3b5	99	82.353	ENSMODG00000023291	SF3B5	83	82.353	Monodelphis_domestica
ENSMZEG00005027407	sf3b5	89	82.716	ENSMALG00000020357	sf3b5	99	82.716	Monopterus_albus
ENSMZEG00005027407	sf3b5	99	81.176	MGP_CAROLIEiJ_G0015120	Sf3b5	99	81.176	Mus_caroli
ENSMZEG00005027407	sf3b5	99	81.176	ENSMUSG00000078348	Sf3b5	99	81.176	Mus_musculus
ENSMZEG00005027407	sf3b5	99	81.176	MGP_PahariEiJ_G0023739	Sf3b5	99	81.176	Mus_pahari
ENSMZEG00005027407	sf3b5	99	81.176	MGP_SPRETEiJ_G0015928	Sf3b5	99	81.176	Mus_spretus
ENSMZEG00005027407	sf3b5	99	82.353	ENSMPUG00000018379	SF3B5	99	82.353	Mustela_putorius_furo
ENSMZEG00005027407	sf3b5	99	82.353	ENSMLUG00000028504	-	99	82.353	Myotis_lucifugus
ENSMZEG00005027407	sf3b5	92	81.250	ENSMLUG00000025546	-	93	81.250	Myotis_lucifugus
ENSMZEG00005027407	sf3b5	99	80.000	ENSMLUG00000010802	-	99	80.000	Myotis_lucifugus
ENSMZEG00005027407	sf3b5	99	82.353	ENSNGAG00000010732	Sf3b5	99	82.353	Nannospalax_galili
ENSMZEG00005027407	sf3b5	100	87.209	ENSNBRG00000014383	sf3b5	100	87.209	Neolamprologus_brichardi
ENSMZEG00005027407	sf3b5	99	82.353	ENSNLEG00000019307	SF3B5	99	82.353	Nomascus_leucogenys
ENSMZEG00005027407	sf3b5	99	82.353	ENSMEUG00000005440	-	99	82.353	Notamacropus_eugenii
ENSMZEG00005027407	sf3b5	99	82.353	ENSMEUG00000005445	-	99	82.353	Notamacropus_eugenii
ENSMZEG00005027407	sf3b5	99	83.529	ENSOPRG00000015107	SF3B5	99	83.529	Ochotona_princeps
ENSMZEG00005027407	sf3b5	99	82.353	ENSODEG00000019507	SF3B5	99	82.353	Octodon_degus
ENSMZEG00005027407	sf3b5	100	87.209	ENSONIG00000020725	sf3b5	100	87.209	Oreochromis_niloticus
ENSMZEG00005027407	sf3b5	63	77.586	ENSOANG00000015301	SF3B5	95	77.586	Ornithorhynchus_anatinus
ENSMZEG00005027407	sf3b5	99	82.353	ENSOCUG00000008752	SF3B5	99	82.353	Oryctolagus_cuniculus
ENSMZEG00005027407	sf3b5	100	86.047	ENSORLG00000004925	sf3b5	100	86.047	Oryzias_latipes
ENSMZEG00005027407	sf3b5	100	86.047	ENSORLG00020011625	sf3b5	100	86.047	Oryzias_latipes_hni
ENSMZEG00005027407	sf3b5	100	86.047	ENSORLG00015017061	sf3b5	100	86.047	Oryzias_latipes_hsok
ENSMZEG00005027407	sf3b5	100	86.047	ENSOMEG00000010620	sf3b5	100	86.047	Oryzias_melastigma
ENSMZEG00005027407	sf3b5	99	82.353	ENSOGAG00000012152	SF3B5	99	82.353	Otolemur_garnettii
ENSMZEG00005027407	sf3b5	99	80.000	ENSOARG00000002617	SF3B5	99	80.000	Ovis_aries
ENSMZEG00005027407	sf3b5	92	82.500	ENSOARG00000019486	-	96	82.500	Ovis_aries
ENSMZEG00005027407	sf3b5	99	82.353	ENSPPAG00000012940	SF3B5	99	82.353	Pan_paniscus
ENSMZEG00005027407	sf3b5	99	82.353	ENSPPRG00000021262	SF3B5	99	82.353	Panthera_pardus
ENSMZEG00005027407	sf3b5	99	82.353	ENSPTIG00000001952	SF3B5	99	82.353	Panthera_tigris_altaica
ENSMZEG00005027407	sf3b5	99	82.353	ENSPTRG00000018676	SF3B5	99	82.353	Pan_troglodytes
ENSMZEG00005027407	sf3b5	99	82.353	ENSPANG00000034242	SF3B5	99	82.353	Papio_anubis
ENSMZEG00005027407	sf3b5	100	86.047	ENSPKIG00000006057	sf3b5	100	86.047	Paramormyrops_kingsleyae
ENSMZEG00005027407	sf3b5	100	81.395	ENSPSIG00000001262	SF3B5	100	81.395	Pelodiscus_sinensis
ENSMZEG00005027407	sf3b5	100	87.209	ENSPMGG00000014804	sf3b5	100	87.209	Periophthalmus_magnuspinnatus
ENSMZEG00005027407	sf3b5	99	81.176	ENSPEMG00000012931	Sf3b5	99	81.176	Peromyscus_maniculatus_bairdii
ENSMZEG00005027407	sf3b5	100	77.907	ENSPMAG00000010296	sf3b5	100	77.907	Petromyzon_marinus
ENSMZEG00005027407	sf3b5	92	83.750	ENSPCIG00000011344	-	78	83.750	Phascolarctos_cinereus
ENSMZEG00005027407	sf3b5	99	62.353	ENSPCIG00000025007	-	99	62.353	Phascolarctos_cinereus
ENSMZEG00005027407	sf3b5	100	87.209	ENSPFOG00000019994	sf3b5	100	87.209	Poecilia_formosa
ENSMZEG00005027407	sf3b5	100	87.209	ENSPLAG00000008412	sf3b5	100	87.209	Poecilia_latipinna
ENSMZEG00005027407	sf3b5	100	87.209	ENSPMEG00000020050	sf3b5	100	87.209	Poecilia_mexicana
ENSMZEG00005027407	sf3b5	100	87.209	ENSPREG00000009242	sf3b5	100	87.209	Poecilia_reticulata
ENSMZEG00005027407	sf3b5	99	82.353	ENSPPYG00000017068	SF3B5	99	82.353	Pongo_abelii
ENSMZEG00005027407	sf3b5	99	82.353	ENSPCAG00000009332	SF3B5	99	82.353	Procavia_capensis
ENSMZEG00005027407	sf3b5	99	82.353	ENSPCOG00000013754	SF3B5	99	82.353	Propithecus_coquereli
ENSMZEG00005027407	sf3b5	64	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSMZEG00005027407	sf3b5	100	87.209	ENSPNYG00000002075	sf3b5	100	87.209	Pundamilia_nyererei
ENSMZEG00005027407	sf3b5	100	84.884	ENSPNAG00000004942	sf3b5	100	84.884	Pygocentrus_nattereri
ENSMZEG00005027407	sf3b5	99	81.176	ENSRNOG00000014908	Sf3b5	99	81.176	Rattus_norvegicus
ENSMZEG00005027407	sf3b5	99	82.353	ENSRBIG00000006301	SF3B5	99	82.353	Rhinopithecus_bieti
ENSMZEG00005027407	sf3b5	99	82.353	ENSRROG00000037067	SF3B5	99	82.353	Rhinopithecus_roxellana
ENSMZEG00005027407	sf3b5	99	82.353	ENSSBOG00000006122	SF3B5	99	82.353	Saimiri_boliviensis_boliviensis
ENSMZEG00005027407	sf3b5	99	81.176	ENSSHAG00000015670	SF3B5	99	81.176	Sarcophilus_harrisii
ENSMZEG00005027407	sf3b5	100	86.047	ENSSFOG00015015767	sf3b5	100	86.047	Scleropages_formosus
ENSMZEG00005027407	sf3b5	100	86.047	ENSSMAG00000018852	sf3b5	100	86.047	Scophthalmus_maximus
ENSMZEG00005027407	sf3b5	100	87.209	ENSSDUG00000018161	sf3b5	100	87.209	Seriola_dumerili
ENSMZEG00005027407	sf3b5	100	87.209	ENSSLDG00000014547	sf3b5	100	87.209	Seriola_lalandi_dorsalis
ENSMZEG00005027407	sf3b5	99	82.353	ENSSARG00000007820	SF3B5	99	82.353	Sorex_araneus
ENSMZEG00005027407	sf3b5	100	87.209	ENSSPAG00000009244	sf3b5	100	87.209	Stegastes_partitus
ENSMZEG00005027407	sf3b5	100	87.209	ENSSPAG00000017371	-	100	87.209	Stegastes_partitus
ENSMZEG00005027407	sf3b5	99	82.353	ENSSSCG00000035578	SF3B5	99	82.353	Sus_scrofa
ENSMZEG00005027407	sf3b5	100	82.558	ENSTGUG00000010810	SF3B5	100	82.558	Taeniopygia_guttata
ENSMZEG00005027407	sf3b5	100	84.884	ENSTRUG00000005577	sf3b5	100	84.884	Takifugu_rubripes
ENSMZEG00005027407	sf3b5	100	84.884	ENSTNIG00000001265	sf3b5	100	84.884	Tetraodon_nigroviridis
ENSMZEG00005027407	sf3b5	99	83.529	ENSTBEG00000003072	SF3B5	99	83.529	Tupaia_belangeri
ENSMZEG00005027407	sf3b5	99	82.353	ENSTTRG00000008817	SF3B5	99	82.353	Tursiops_truncatus
ENSMZEG00005027407	sf3b5	99	82.353	ENSUAMG00000027296	SF3B5	99	82.353	Ursus_americanus
ENSMZEG00005027407	sf3b5	99	82.353	ENSUMAG00000005448	SF3B5	99	82.353	Ursus_maritimus
ENSMZEG00005027407	sf3b5	99	82.353	ENSVPAG00000003826	SF3B5	99	82.353	Vicugna_pacos
ENSMZEG00005027407	sf3b5	99	82.353	ENSVVUG00000004703	SF3B5	99	82.353	Vulpes_vulpes
ENSMZEG00005027407	sf3b5	100	83.721	ENSXETG00000021409	sf3b5	100	83.721	Xenopus_tropicalis
ENSMZEG00005027407	sf3b5	100	87.209	ENSXMAG00000019971	sf3b5	100	87.209	Xiphophorus_maculatus