EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027721 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 53269 bases
Position: chrLG13:16497279-16550547
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037197	zf-met	PF12874.7	2.6e-27	1	4
ENSMZEP00005037197	zf-met	PF12874.7	2.6e-27	2	4
ENSMZEP00005037197	zf-met	PF12874.7	2.6e-27	3	4
ENSMZEP00005037197	zf-met	PF12874.7	2.6e-27	4	4
ENSMZEP00005037197	zf-C2H2_jaz	PF12171.8	1.2e-20	1	2
ENSMZEP00005037197	zf-C2H2_jaz	PF12171.8	1.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038500	-	675	-	ENSMZEP00005037197	224 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005027721's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027721's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027721	zgc:171482	100	86.726	ENSAPOG00000019970	zgc:171482	100	86.726	Acanthochromis_polyacanthus
ENSMZEG00005027721	zgc:171482	79	92.308	ENSACIG00000021512	zgc:171482	87	92.308	Amphilophus_citrinellus
ENSMZEG00005027721	zgc:171482	79	92.437	ENSAOCG00000000751	zgc:171482	88	92.437	Amphiprion_ocellaris
ENSMZEG00005027721	zgc:171482	79	85.606	ENSAPEG00000014154	zgc:171482	95	85.606	Amphiprion_percula
ENSMZEG00005027721	zgc:171482	100	84.513	ENSATEG00000001371	zgc:171482	100	82.328	Anabas_testudineus
ENSMZEG00005027721	zgc:171482	79	94.118	ENSACLG00000010511	zgc:171482	83	94.118	Astatotilapia_calliptera
ENSMZEG00005027721	zgc:171482	100	84.821	ENSAMXG00000002299	zgc:171482	100	85.268	Astyanax_mexicanus
ENSMZEG00005027721	zgc:171482	100	66.082	ENSCSEG00000006509	zgc:171482	100	66.082	Cynoglossus_semilaevis
ENSMZEG00005027721	zgc:171482	100	88.546	ENSCVAG00000013606	zgc:171482	100	88.546	Cyprinodon_variegatus
ENSMZEG00005027721	zgc:171482	99	82.174	ENSDARG00000074415	zgc:171482	97	82.174	Danio_rerio
ENSMZEG00005027721	zgc:171482	79	89.831	ENSELUG00000021817	zgc:171482	95	81.818	Esox_lucius
ENSMZEG00005027721	zgc:171482	81	64.130	ENSELUG00000017517	-	60	81.111	Esox_lucius
ENSMZEG00005027721	zgc:171482	100	85.463	ENSFHEG00000002233	zgc:171482	100	85.463	Fundulus_heteroclitus
ENSMZEG00005027721	zgc:171482	100	84.071	ENSGMOG00000010508	zgc:171482	100	84.071	Gadus_morhua
ENSMZEG00005027721	zgc:171482	100	90.984	ENSGAFG00000009398	zgc:171482	100	69.006	Gambusia_affinis
ENSMZEG00005027721	zgc:171482	100	87.931	ENSGACG00000007680	zgc:171482	100	87.931	Gasterosteus_aculeatus
ENSMZEG00005027721	zgc:171482	79	87.692	ENSHBUG00000023289	zgc:171482	98	87.692	Haplochromis_burtoni
ENSMZEG00005027721	zgc:171482	79	86.777	ENSHCOG00000018086	zgc:171482	90	86.777	Hippocampus_comes
ENSMZEG00005027721	zgc:171482	79	89.744	ENSIPUG00000000361	zgc:171482	85	89.744	Ictalurus_punctatus
ENSMZEG00005027721	zgc:171482	51	78.947	ENSIPUG00000000356	-	82	75.000	Ictalurus_punctatus
ENSMZEG00005027721	zgc:171482	100	83.628	ENSKMAG00000005077	zgc:171482	86	83.628	Kryptolebias_marmoratus
ENSMZEG00005027721	zgc:171482	79	89.167	ENSLBEG00000023823	zgc:171482	86	89.167	Labrus_bergylta
ENSMZEG00005027721	zgc:171482	100	80.176	ENSLOCG00000008863	zgc:171482	97	81.140	Lepisosteus_oculatus
ENSMZEG00005027721	zgc:171482	99	89.167	ENSMAMG00000001031	zgc:171482	83	82.576	Mastacembelus_armatus
ENSMZEG00005027721	zgc:171482	86	91.667	ENSMMOG00000010523	zgc:171482	97	91.667	Mola_mola
ENSMZEG00005027721	zgc:171482	100	87.336	ENSMALG00000017883	zgc:171482	100	87.336	Monopterus_albus
ENSMZEG00005027721	zgc:171482	79	92.241	ENSNBRG00000021035	zgc:171482	87	92.241	Neolamprologus_brichardi
ENSMZEG00005027721	zgc:171482	99	90.265	ENSONIG00000018365	zgc:171482	98	90.265	Oreochromis_niloticus
ENSMZEG00005027721	zgc:171482	100	87.391	ENSORLG00000007607	zgc:171482	100	87.391	Oryzias_latipes
ENSMZEG00005027721	zgc:171482	100	86.522	ENSORLG00020003563	zgc:171482	100	86.522	Oryzias_latipes_hni
ENSMZEG00005027721	zgc:171482	100	87.391	ENSORLG00015008552	zgc:171482	100	87.391	Oryzias_latipes_hsok
ENSMZEG00005027721	zgc:171482	79	90.678	ENSOMEG00000003526	zgc:171482	83	90.678	Oryzias_melastigma
ENSMZEG00005027721	zgc:171482	86	90.517	ENSPKIG00000015911	-	84	90.517	Paramormyrops_kingsleyae
ENSMZEG00005027721	zgc:171482	79	89.908	ENSPKIG00000016244	zgc:171482	88	82.400	Paramormyrops_kingsleyae
ENSMZEG00005027721	zgc:171482	99	83.682	ENSPMGG00000020230	zgc:171482	100	83.682	Periophthalmus_magnuspinnatus
ENSMZEG00005027721	zgc:171482	99	84.519	ENSPFOG00000001974	zgc:171482	96	84.519	Poecilia_formosa
ENSMZEG00005027721	zgc:171482	100	88.106	ENSPLAG00000003327	zgc:171482	100	88.106	Poecilia_latipinna
ENSMZEG00005027721	zgc:171482	99	90.833	ENSPMEG00000004988	zgc:171482	100	86.667	Poecilia_mexicana
ENSMZEG00005027721	zgc:171482	86	90.833	ENSPREG00000019241	zgc:171482	91	90.833	Poecilia_reticulata
ENSMZEG00005027721	zgc:171482	79	94.118	ENSPNYG00000007773	zgc:171482	83	94.118	Pundamilia_nyererei
ENSMZEG00005027721	zgc:171482	99	82.174	ENSPNAG00000007619	zgc:171482	97	83.043	Pygocentrus_nattereri
ENSMZEG00005027721	zgc:171482	79	86.207	ENSSFOG00015016149	zgc:171482	94	86.207	Scleropages_formosus
ENSMZEG00005027721	zgc:171482	79	88.793	ENSSFOG00015021238	zgc:171482	78	88.793	Scleropages_formosus
ENSMZEG00005027721	zgc:171482	79	90.678	ENSSMAG00000002715	zgc:171482	76	90.678	Scophthalmus_maximus
ENSMZEG00005027721	zgc:171482	79	90.833	ENSSDUG00000008773	zgc:171482	85	90.833	Seriola_dumerili
ENSMZEG00005027721	zgc:171482	79	90.833	ENSSLDG00000019510	zgc:171482	85	90.833	Seriola_lalandi_dorsalis
ENSMZEG00005027721	zgc:171482	79	91.597	ENSSPAG00000013724	zgc:171482	94	91.597	Stegastes_partitus
ENSMZEG00005027721	zgc:171482	85	81.343	ENSTRUG00000005705	zgc:171482	76	83.721	Takifugu_rubripes
ENSMZEG00005027721	zgc:171482	100	76.496	ENSTNIG00000008679	zgc:171482	100	76.496	Tetraodon_nigroviridis
ENSMZEG00005027721	zgc:171482	84	60.145	ENSXETG00000013525	zmat4	83	62.500	Xenopus_tropicalis
ENSMZEG00005027721	zgc:171482	100	87.500	ENSXMAG00000002641	zgc:171482	100	66.864	Xiphophorus_maculatus