EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027793 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4269 bases
Position: chrAGTA05000143.1:305403-309671
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	1	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	2	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	3	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	4	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	5	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	6	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	7	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	8	9
ENSMZEP00005037288	zf-C2H2	PF00096.26	1.7e-51	9	9
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	1	7
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	2	7
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	3	7
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	4	7
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	5	7
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	6	7
ENSMZEP00005037288	zf-met	PF12874.7	4.5e-27	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038591	-	1185	-	ENSMZEP00005037288	394 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005027793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027793	-	74	43.046	ENSACIG00000008886	znf1164	85	43.046	Amphilophus_citrinellus
ENSMZEG00005027793	-	76	47.059	ENSACIG00000007882	-	80	47.059	Amphilophus_citrinellus
ENSMZEG00005027793	-	97	62.753	ENSACIG00000000360	si:ch211-241b2.1	96	62.753	Amphilophus_citrinellus
ENSMZEG00005027793	-	65	38.621	ENSAOCG00000021565	-	76	38.621	Amphiprion_ocellaris
ENSMZEG00005027793	-	89	48.305	ENSATEG00000008667	-	93	48.305	Anabas_testudineus
ENSMZEG00005027793	-	97	49.711	ENSATEG00000008683	si:ch211-241b2.1	88	49.711	Anabas_testudineus
ENSMZEG00005027793	-	74	39.535	ENSACLG00000017449	-	58	39.535	Astatotilapia_calliptera
ENSMZEG00005027793	-	75	41.420	ENSACLG00000000521	-	93	41.420	Astatotilapia_calliptera
ENSMZEG00005027793	-	98	60.697	ENSACLG00000024670	-	93	60.000	Astatotilapia_calliptera
ENSMZEG00005027793	-	77	57.310	ENSAMXG00000041650	-	85	57.310	Astyanax_mexicanus
ENSMZEG00005027793	-	75	52.823	ENSAMXG00000043291	-	66	52.823	Astyanax_mexicanus
ENSMZEG00005027793	-	96	36.216	ENSCSEG00000015585	-	94	36.216	Cynoglossus_semilaevis
ENSMZEG00005027793	-	82	53.819	ENSDARG00000100803	zgc:173517	99	53.819	Danio_rerio
ENSMZEG00005027793	-	79	49.606	ENSDARG00000116765	zgc:162962	99	49.606	Danio_rerio
ENSMZEG00005027793	-	70	54.183	ENSDARG00000109703	FO834825.1	81	54.183	Danio_rerio
ENSMZEG00005027793	-	77	52.193	ENSDARG00000115857	znf1001	95	52.193	Danio_rerio
ENSMZEG00005027793	-	74	53.448	ENSDARG00000098248	CABZ01081730.1	91	51.948	Danio_rerio
ENSMZEG00005027793	-	77	51.460	ENSDARG00000105074	BX000701.2	97	51.460	Danio_rerio
ENSMZEG00005027793	-	72	56.842	ENSDARG00000099890	CU207221.2	92	56.842	Danio_rerio
ENSMZEG00005027793	-	84	53.012	ENSDARG00000053165	zgc:113377	99	53.012	Danio_rerio
ENSMZEG00005027793	-	77	52.837	ENSDARG00000113011	zgc:113102	99	54.386	Danio_rerio
ENSMZEG00005027793	-	90	52.212	ENSDARG00000088507	znf982	92	48.276	Danio_rerio
ENSMZEG00005027793	-	76	52.239	ENSDARG00000097521	si:dkey-111k8.5	91	52.239	Danio_rerio
ENSMZEG00005027793	-	74	48.592	ENSDARG00000105295	LO017784.1	83	48.592	Danio_rerio
ENSMZEG00005027793	-	76	54.651	ENSDARG00000105056	znf45l	97	54.651	Danio_rerio
ENSMZEG00005027793	-	85	48.529	ENSDARG00000099618	si:dkey-1b17.6	98	43.820	Danio_rerio
ENSMZEG00005027793	-	72	46.667	ENSDARG00000104065	znf1154	80	46.667	Danio_rerio
ENSMZEG00005027793	-	77	55.052	ENSDARG00000099731	CABZ01066719.1	96	55.052	Danio_rerio
ENSMZEG00005027793	-	77	50.859	ENSDARG00000099172	BX000701.1	90	50.859	Danio_rerio
ENSMZEG00005027793	-	77	52.193	ENSDARG00000102401	znf1001	95	52.193	Danio_rerio
ENSMZEG00005027793	-	77	53.257	ENSDARG00000103777	znf1001	98	53.257	Danio_rerio
ENSMZEG00005027793	-	78	42.222	ENSEBUG00000015073	-	91	40.220	Eptatretus_burgeri
ENSMZEG00005027793	-	94	48.214	ENSFHEG00000013152	-	84	48.214	Fundulus_heteroclitus
ENSMZEG00005027793	-	99	45.455	ENSFHEG00000018209	-	97	45.455	Fundulus_heteroclitus
ENSMZEG00005027793	-	98	48.795	ENSFHEG00000014023	-	93	48.630	Fundulus_heteroclitus
ENSMZEG00005027793	-	89	49.129	ENSFHEG00000018009	-	61	49.129	Fundulus_heteroclitus
ENSMZEG00005027793	-	98	46.154	ENSHBUG00000009953	-	88	46.154	Haplochromis_burtoni
ENSMZEG00005027793	-	97	71.914	ENSHBUG00000018916	-	86	71.914	Haplochromis_burtoni
ENSMZEG00005027793	-	92	46.725	ENSKMAG00000009563	-	78	51.587	Kryptolebias_marmoratus
ENSMZEG00005027793	-	98	44.444	ENSKMAG00000014629	-	88	44.444	Kryptolebias_marmoratus
ENSMZEG00005027793	-	85	39.437	ENSLBEG00000020461	-	50	47.778	Labrus_bergylta
ENSMZEG00005027793	-	93	42.202	ENSLBEG00000028628	znf1174	62	42.202	Labrus_bergylta
ENSMZEG00005027793	-	85	42.143	ENSLBEG00000022939	-	58	41.429	Labrus_bergylta
ENSMZEG00005027793	-	97	48.515	ENSMAMG00000014743	-	68	48.515	Mastacembelus_armatus
ENSMZEG00005027793	-	72	45.714	ENSMZEG00005005162	-	76	45.283	Maylandia_zebra
ENSMZEG00005027793	-	73	46.311	ENSMZEG00005021426	-	78	46.311	Maylandia_zebra
ENSMZEG00005027793	-	98	57.386	ENSMZEG00005027943	-	98	55.932	Maylandia_zebra
ENSMZEG00005027793	-	74	56.061	ENSMZEG00005025729	-	89	56.061	Maylandia_zebra
ENSMZEG00005027793	-	97	90.698	ENSMZEG00005026470	-	80	90.698	Maylandia_zebra
ENSMZEG00005027793	-	94	72.168	ENSMZEG00005007426	-	87	72.168	Maylandia_zebra
ENSMZEG00005027793	-	74	38.647	ENSMZEG00005025568	-	80	37.647	Maylandia_zebra
ENSMZEG00005027793	-	75	38.129	ENSMZEG00005022161	-	94	38.129	Maylandia_zebra
ENSMZEG00005027793	-	98	47.761	ENSMALG00000018074	-	87	47.761	Monopterus_albus
ENSMZEG00005027793	-	90	38.431	ENSMALG00000008638	-	67	38.431	Monopterus_albus
ENSMZEG00005027793	-	97	58.000	ENSNBRG00000000577	-	93	62.162	Neolamprologus_brichardi
ENSMZEG00005027793	-	88	44.059	ENSONIG00000013908	-	100	44.059	Oreochromis_niloticus
ENSMZEG00005027793	-	73	37.407	ENSONIG00000006585	-	100	38.129	Oreochromis_niloticus
ENSMZEG00005027793	-	73	42.857	ENSONIG00000003363	-	99	42.857	Oreochromis_niloticus
ENSMZEG00005027793	-	74	50.442	ENSORLG00020019341	-	79	58.140	Oryzias_latipes_hni
ENSMZEG00005027793	-	76	45.890	ENSPKIG00000018633	-	50	45.890	Paramormyrops_kingsleyae
ENSMZEG00005027793	-	83	40.426	ENSPKIG00000020324	-	62	40.426	Paramormyrops_kingsleyae
ENSMZEG00005027793	-	98	40.517	ENSPMGG00000001558	znf1174	88	40.517	Periophthalmus_magnuspinnatus
ENSMZEG00005027793	-	73	42.180	ENSPFOG00000011766	-	98	42.180	Poecilia_formosa
ENSMZEG00005027793	-	76	45.763	ENSPFOG00000001144	-	100	45.763	Poecilia_formosa
ENSMZEG00005027793	-	97	42.773	ENSPLAG00000016561	zgc:113348	93	46.667	Poecilia_latipinna
ENSMZEG00005027793	-	97	42.718	ENSPMEG00000007573	zgc:113343	87	42.718	Poecilia_mexicana
ENSMZEG00005027793	-	96	42.718	ENSPREG00000001514	zgc:113343	86	42.718	Poecilia_reticulata
ENSMZEG00005027793	-	73	40.310	ENSPREG00000014105	-	91	40.310	Poecilia_reticulata
ENSMZEG00005027793	-	71	35.836	ENSPREG00000005538	-	71	35.836	Poecilia_reticulata
ENSMZEG00005027793	-	74	40.698	ENSPNYG00000024183	zgc:173577	99	40.698	Pundamilia_nyererei
ENSMZEG00005027793	-	97	59.259	ENSSDUG00000008682	-	94	59.259	Seriola_dumerili
ENSMZEG00005027793	-	79	34.899	ENSSPAG00000009426	-	61	36.196	Stegastes_partitus
ENSMZEG00005027793	-	73	41.143	ENSSPAG00000006539	-	95	41.143	Stegastes_partitus
ENSMZEG00005027793	-	92	49.153	ENSSPAG00000013109	si:ch211-241b2.1	69	49.153	Stegastes_partitus
ENSMZEG00005027793	-	73	47.802	ENSTNIG00000000277	-	93	47.802	Tetraodon_nigroviridis
ENSMZEG00005027793	-	96	45.614	ENSXCOG00000017871	zgc:113343	85	45.614	Xiphophorus_couchianus
ENSMZEG00005027793	-	96	45.614	ENSXMAG00000019923	zgc:113343	86	45.614	Xiphophorus_maculatus