EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005027943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 57783 bases
Position: chrAGTA05000153.1:215648-273430
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	1	7
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	2	7
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	3	7
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	4	7
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	5	7
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	6	7
ENSMZEP00005037487	zf-C2H2	PF00096.26	3.8e-34	7	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	1	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	2	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	3	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	4	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	5	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	6	7
ENSMZEP00005037482	zf-C2H2	PF00096.26	1.3e-31	7	7
ENSMZEP00005037493	zf-C2H2	PF00096.26	7.1e-30	1	6
ENSMZEP00005037493	zf-C2H2	PF00096.26	7.1e-30	2	6
ENSMZEP00005037493	zf-C2H2	PF00096.26	7.1e-30	3	6
ENSMZEP00005037493	zf-C2H2	PF00096.26	7.1e-30	4	6
ENSMZEP00005037493	zf-C2H2	PF00096.26	7.1e-30	5	6
ENSMZEP00005037493	zf-C2H2	PF00096.26	7.1e-30	6	6
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	1	7
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	2	7
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	3	7
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	4	7
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	5	7
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	6	7
ENSMZEP00005037485	zf-C2H2	PF00096.26	2.8e-29	7	7
ENSMZEP00005037513	zf-C2H2	PF00096.26	2.1e-28	1	6
ENSMZEP00005037513	zf-C2H2	PF00096.26	2.1e-28	2	6
ENSMZEP00005037513	zf-C2H2	PF00096.26	2.1e-28	3	6
ENSMZEP00005037513	zf-C2H2	PF00096.26	2.1e-28	4	6
ENSMZEP00005037513	zf-C2H2	PF00096.26	2.1e-28	5	6
ENSMZEP00005037513	zf-C2H2	PF00096.26	2.1e-28	6	6
ENSMZEP00005037468	zf-C2H2	PF00096.26	5.8e-24	1	5
ENSMZEP00005037468	zf-C2H2	PF00096.26	5.8e-24	2	5
ENSMZEP00005037468	zf-C2H2	PF00096.26	5.8e-24	3	5
ENSMZEP00005037468	zf-C2H2	PF00096.26	5.8e-24	4	5
ENSMZEP00005037468	zf-C2H2	PF00096.26	5.8e-24	5	5
ENSMZEP00005037499	zf-C2H2	PF00096.26	5.4e-23	1	4
ENSMZEP00005037499	zf-C2H2	PF00096.26	5.4e-23	2	4
ENSMZEP00005037499	zf-C2H2	PF00096.26	5.4e-23	3	4
ENSMZEP00005037499	zf-C2H2	PF00096.26	5.4e-23	4	4
ENSMZEP00005037505	zf-C2H2	PF00096.26	3.2e-21	1	4
ENSMZEP00005037505	zf-C2H2	PF00096.26	3.2e-21	2	4
ENSMZEP00005037505	zf-C2H2	PF00096.26	3.2e-21	3	4
ENSMZEP00005037505	zf-C2H2	PF00096.26	3.2e-21	4	4
ENSMZEP00005037474	zf-C2H2	PF00096.26	3.8e-07	1	2
ENSMZEP00005037474	zf-C2H2	PF00096.26	3.8e-07	2	2
ENSMZEP00005037482	zf-met	PF12874.7	3.9e-10	1	2
ENSMZEP00005037482	zf-met	PF12874.7	3.9e-10	2	2
ENSMZEP00005037493	zf-met	PF12874.7	4.8e-09	1	2
ENSMZEP00005037493	zf-met	PF12874.7	4.8e-09	2	2
ENSMZEP00005037485	zf-met	PF12874.7	1.2e-07	1	1
ENSMZEP00005037468	zf-met	PF12874.7	1.2e-07	1	1
ENSMZEP00005037487	zf-met	PF12874.7	1.2e-06	1	2
ENSMZEP00005037487	zf-met	PF12874.7	1.2e-06	2	2
ENSMZEP00005037513	zf-met	PF12874.7	0.00038	1	2
ENSMZEP00005037513	zf-met	PF12874.7	0.00038	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038774	-	651	-	ENSMZEP00005037468	216 (aa)	-	-
ENSMZET00005038794	-	975	-	ENSMZEP00005037487	324 (aa)	-	-
ENSMZET00005038792	-	741	-	ENSMZEP00005037485	246 (aa)	-	-
ENSMZET00005038780	-	450	-	ENSMZEP00005037474	149 (aa)	-	-
ENSMZET00005038789	-	813	-	ENSMZEP00005037482	270 (aa)	-	-
ENSMZET00005038800	-	918	-	ENSMZEP00005037493	305 (aa)	-	-
ENSMZET00005038812	-	834	-	ENSMZEP00005037505	277 (aa)	-	-
ENSMZET00005038806	-	702	-	ENSMZEP00005037499	233 (aa)	-	-
ENSMZET00005038822	-	984	-	ENSMZEP00005037513	327 (aa)	-	-

Gene Model

Click here to download ENSMZEG00005027943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005027943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005027943	-	95	47.701	ENSACIG00000007882	-	85	45.989	Amphilophus_citrinellus
ENSMZEG00005027943	-	94	48.958	ENSACIG00000008886	znf1164	91	47.059	Amphilophus_citrinellus
ENSMZEG00005027943	-	98	55.660	ENSACIG00000000360	si:ch211-241b2.1	98	58.955	Amphilophus_citrinellus
ENSMZEG00005027943	-	94	49.505	ENSAOCG00000021565	-	68	40.462	Amphiprion_ocellaris
ENSMZEG00005027943	-	94	58.750	ENSATEG00000008683	si:ch211-241b2.1	84	58.750	Anabas_testudineus
ENSMZEG00005027943	-	95	49.074	ENSATEG00000008667	-	79	49.074	Anabas_testudineus
ENSMZEG00005027943	-	98	42.149	ENSACLG00000017449	-	68	39.024	Astatotilapia_calliptera
ENSMZEG00005027943	-	95	40.816	ENSACLG00000000521	-	99	42.169	Astatotilapia_calliptera
ENSMZEG00005027943	-	99	61.404	ENSACLG00000024670	-	87	61.404	Astatotilapia_calliptera
ENSMZEG00005027943	-	97	47.391	ENSAMXG00000043291	-	73	52.023	Astyanax_mexicanus
ENSMZEG00005027943	-	97	50.270	ENSAMXG00000041650	-	84	56.983	Astyanax_mexicanus
ENSMZEG00005027943	-	98	51.724	ENSAMXG00000035349	-	50	51.316	Astyanax_mexicanus
ENSMZEG00005027943	-	92	48.000	ENSAMXG00000029660	-	59	45.291	Astyanax_mexicanus
ENSMZEG00005027943	-	94	37.984	ENSCSEG00000015585	-	92	37.097	Cynoglossus_semilaevis
ENSMZEG00005027943	-	99	55.208	ENSDARG00000053165	zgc:113377	97	50.000	Danio_rerio
ENSMZEG00005027943	-	100	47.529	ENSDARG00000088507	znf982	100	54.630	Danio_rerio
ENSMZEG00005027943	-	77	46.667	ENSDARG00000098613	si:dkey-15h8.16	89	47.982	Danio_rerio
ENSMZEG00005027943	-	68	50.617	ENSDARG00000093562	si:dkey-20i20.7	84	54.622	Danio_rerio
ENSMZEG00005027943	-	96	51.701	ENSDARG00000102401	znf1001	99	47.907	Danio_rerio
ENSMZEG00005027943	-	96	46.637	ENSDARG00000116765	zgc:162962	98	47.619	Danio_rerio
ENSMZEG00005027943	-	99	50.870	ENSDARG00000099890	CU207221.2	99	53.374	Danio_rerio
ENSMZEG00005027943	-	71	45.263	ENSDARG00000092246	si:dkey-20i20.3	84	55.455	Danio_rerio
ENSMZEG00005027943	-	68	41.346	ENSDARG00000098661	AL935300.3	95	46.000	Danio_rerio
ENSMZEG00005027943	-	91	47.807	ENSDARG00000101044	si:ch73-138e16.6	99	53.049	Danio_rerio
ENSMZEG00005027943	-	100	49.038	ENSDARG00000102678	znf1181	85	54.737	Danio_rerio
ENSMZEG00005027943	-	99	45.333	ENSDARG00000109703	FO834825.1	99	47.887	Danio_rerio
ENSMZEG00005027943	-	95	50.000	ENSDARG00000105056	znf45l	99	51.220	Danio_rerio
ENSMZEG00005027943	-	96	51.701	ENSDARG00000115857	znf1001	99	47.907	Danio_rerio
ENSMZEG00005027943	-	95	45.455	ENSDARG00000104065	znf1154	92	53.000	Danio_rerio
ENSMZEG00005027943	-	68	46.154	ENSDARG00000112141	znf1169	83	44.578	Danio_rerio
ENSMZEG00005027943	-	74	51.852	ENSDARG00000101885	si:dkey-20i20.11	98	56.364	Danio_rerio
ENSMZEG00005027943	-	94	44.538	ENSDARG00000078159	zgc:175284	98	47.742	Danio_rerio
ENSMZEG00005027943	-	59	51.250	ENSDARG00000092027	si:dkey-20i20.9	73	54.878	Danio_rerio
ENSMZEG00005027943	-	100	42.188	ENSDARG00000099618	si:dkey-1b17.6	99	50.289	Danio_rerio
ENSMZEG00005027943	-	97	49.498	ENSDARG00000113011	zgc:113102	99	52.299	Danio_rerio
ENSMZEG00005027943	-	97	49.225	ENSDARG00000099731	CABZ01066719.1	97	50.000	Danio_rerio
ENSMZEG00005027943	-	97	49.474	ENSDARG00000092605	znf1003	90	53.143	Danio_rerio
ENSMZEG00005027943	-	95	45.603	ENSDARG00000101694	znf1184	96	47.692	Danio_rerio
ENSMZEG00005027943	-	93	47.368	ENSDARG00000078814	si:dkey-34m19.3	89	49.045	Danio_rerio
ENSMZEG00005027943	-	86	51.220	ENSDARG00000103530	zgc:113102	95	54.667	Danio_rerio
ENSMZEG00005027943	-	73	46.970	ENSDARG00000095455	si:dkey-20i20.10	90	52.727	Danio_rerio
ENSMZEG00005027943	-	95	45.361	ENSDARG00000103827	znf1144	98	55.128	Danio_rerio
ENSMZEG00005027943	-	81	50.538	ENSDARG00000111899	zgc:171435	89	45.902	Danio_rerio
ENSMZEG00005027943	-	95	50.704	ENSDARG00000100803	zgc:173517	97	53.988	Danio_rerio
ENSMZEG00005027943	-	95	51.613	ENSDARG00000097521	si:dkey-111k8.5	97	50.276	Danio_rerio
ENSMZEG00005027943	-	97	47.231	ENSDARG00000099172	BX000701.1	87	51.163	Danio_rerio
ENSMZEG00005027943	-	78	51.802	ENSDARG00000111614	znf1183	91	50.000	Danio_rerio
ENSMZEG00005027943	-	97	46.358	ENSDARG00000105074	BX000701.2	98	45.813	Danio_rerio
ENSMZEG00005027943	-	91	49.485	ENSDARG00000100361	znf1174	88	53.165	Danio_rerio
ENSMZEG00005027943	-	97	45.110	ENSDARG00000098248	CABZ01081730.1	99	53.374	Danio_rerio
ENSMZEG00005027943	-	96	58.824	ENSDARG00000103777	znf1001	99	58.824	Danio_rerio
ENSMZEG00005027943	-	85	48.315	ENSDARG00000098923	zgc:173577	96	51.724	Danio_rerio
ENSMZEG00005027943	-	96	45.734	ENSDARG00000094736	znf1157	95	58.621	Danio_rerio
ENSMZEG00005027943	-	92	30.594	FBgn0037877	CG6689	52	32.927	Drosophila_melanogaster
ENSMZEG00005027943	-	93	42.606	ENSEBUG00000015073	-	92	46.183	Eptatretus_burgeri
ENSMZEG00005027943	-	94	53.933	ENSFHEG00000018009	-	57	57.059	Fundulus_heteroclitus
ENSMZEG00005027943	-	95	43.548	ENSFHEG00000013152	-	69	50.450	Fundulus_heteroclitus
ENSMZEG00005027943	-	96	52.288	ENSFHEG00000014023	-	68	50.968	Fundulus_heteroclitus
ENSMZEG00005027943	-	98	45.752	ENSFHEG00000018209	-	88	45.455	Fundulus_heteroclitus
ENSMZEG00005027943	-	92	65.306	ENSHBUG00000018916	-	82	65.306	Haplochromis_burtoni
ENSMZEG00005027943	-	99	42.500	ENSHBUG00000009953	-	87	43.750	Haplochromis_burtoni
ENSMZEG00005027943	-	94	57.317	ENSKMAG00000009563	-	87	47.500	Kryptolebias_marmoratus
ENSMZEG00005027943	-	97	50.769	ENSLBEG00000022939	-	65	36.029	Labrus_bergylta
ENSMZEG00005027943	-	95	55.263	ENSLBEG00000020461	-	67	55.263	Labrus_bergylta
ENSMZEG00005027943	-	93	42.328	ENSLBEG00000028628	znf1174	57	48.214	Labrus_bergylta
ENSMZEG00005027943	-	98	48.087	ENSMAMG00000014743	-	67	48.276	Mastacembelus_armatus
ENSMZEG00005027943	-	86	45.763	ENSMZEG00005005162	-	82	48.980	Maylandia_zebra
ENSMZEG00005027943	-	96	59.036	ENSMZEG00005026470	-	78	59.036	Maylandia_zebra
ENSMZEG00005027943	-	95	43.396	ENSMZEG00005025568	-	80	42.775	Maylandia_zebra
ENSMZEG00005027943	-	97	54.634	ENSMZEG00005025729	-	99	51.163	Maylandia_zebra
ENSMZEG00005027943	-	90	51.613	ENSMZEG00005021426	-	80	50.000	Maylandia_zebra
ENSMZEG00005027943	-	98	55.932	ENSMZEG00005027793	-	98	57.386	Maylandia_zebra
ENSMZEG00005027943	-	96	39.175	ENSMZEG00005022161	-	96	34.028	Maylandia_zebra
ENSMZEG00005027943	-	94	67.347	ENSMZEG00005007426	-	87	67.347	Maylandia_zebra
ENSMZEG00005027943	-	90	41.270	ENSMALG00000008638	-	67	39.894	Monopterus_albus
ENSMZEG00005027943	-	96	51.724	ENSMALG00000018074	-	84	52.482	Monopterus_albus
ENSMZEG00005027943	-	96	62.319	ENSNBRG00000000577	-	89	64.000	Neolamprologus_brichardi
ENSMZEG00005027943	-	95	41.525	ENSONIG00000003363	-	99	45.181	Oreochromis_niloticus
ENSMZEG00005027943	-	93	36.275	ENSONIG00000006585	-	99	44.526	Oreochromis_niloticus
ENSMZEG00005027943	-	95	51.020	ENSONIG00000013908	-	100	51.020	Oreochromis_niloticus
ENSMZEG00005027943	-	95	47.826	ENSORLG00020019341	-	79	66.667	Oryzias_latipes_hni
ENSMZEG00005027943	-	97	48.000	ENSPKIG00000019848	-	53	48.000	Paramormyrops_kingsleyae
ENSMZEG00005027943	-	94	54.348	ENSPKIG00000018633	-	63	43.478	Paramormyrops_kingsleyae
ENSMZEG00005027943	-	95	54.839	ENSPKIG00000020324	-	56	41.463	Paramormyrops_kingsleyae
ENSMZEG00005027943	-	95	46.377	ENSPMGG00000001558	znf1174	89	46.377	Periophthalmus_magnuspinnatus
ENSMZEG00005027943	-	94	40.385	ENSPFOG00000011766	-	100	42.188	Poecilia_formosa
ENSMZEG00005027943	-	97	45.385	ENSPFOG00000001144	-	100	47.887	Poecilia_formosa
ENSMZEG00005027943	-	95	52.143	ENSPLAG00000016561	zgc:113348	94	51.136	Poecilia_latipinna
ENSMZEG00005027943	-	95	43.750	ENSPMEG00000007573	zgc:113343	66	44.910	Poecilia_mexicana
ENSMZEG00005027943	-	97	46.703	ENSPREG00000014105	-	95	45.402	Poecilia_reticulata
ENSMZEG00005027943	-	94	42.857	ENSPREG00000001514	zgc:113343	66	44.311	Poecilia_reticulata
ENSMZEG00005027943	-	100	40.000	ENSPREG00000005538	-	93	41.954	Poecilia_reticulata
ENSMZEG00005027943	-	95	36.126	ENSPNYG00000024183	zgc:173577	98	40.625	Pundamilia_nyererei
ENSMZEG00005027943	-	96	62.500	ENSSDUG00000008682	-	94	62.500	Seriola_dumerili
ENSMZEG00005027943	-	98	52.542	ENSSPAG00000013109	si:ch211-241b2.1	90	48.503	Stegastes_partitus
ENSMZEG00005027943	-	95	38.235	ENSSPAG00000006539	-	97	39.394	Stegastes_partitus
ENSMZEG00005027943	-	97	50.000	ENSSPAG00000009426	-	82	36.054	Stegastes_partitus
ENSMZEG00005027943	-	94	47.753	ENSTNIG00000000277	-	98	47.753	Tetraodon_nigroviridis
ENSMZEG00005027943	-	95	48.077	ENSXCOG00000017871	zgc:113343	65	45.673	Xiphophorus_couchianus
ENSMZEG00005027943	-	95	47.771	ENSXMAG00000019923	zgc:113343	71	44.910	Xiphophorus_maculatus