EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005028002 (Gene tree)
Gene ID: 101483482
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 10971 bases
Position: chrLG3:4851950-4862920
Accession: 101483482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037547	ARS2	PF04959.13	2.1e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038856	-	3470	XM_024801192	ENSMZEP00005037547	870 (aa)	XP_024656960	UPI000D327CEA

Gene Model

Click here to download ENSMZEG00005028002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005028002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005028002	-	52	64.592	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSMZEG00005028002	-	52	66.304	ENSAPOG00000002304	srrt	52	66.953	Acanthochromis_polyacanthus
ENSMZEG00005028002	-	96	55.156	ENSAMEG00000014506	SRRT	53	61.777	Ailuropoda_melanoleuca
ENSMZEG00005028002	-	76	65.870	ENSACIG00000015795	srrt	83	65.319	Amphilophus_citrinellus
ENSMZEG00005028002	-	93	86.576	ENSAOCG00000009189	-	93	85.961	Amphiprion_ocellaris
ENSMZEG00005028002	-	78	66.087	ENSAOCG00000009693	srrt	81	65.745	Amphiprion_ocellaris
ENSMZEG00005028002	-	76	66.017	ENSAPEG00000003646	srrt	82	65.319	Amphiprion_percula
ENSMZEG00005028002	-	93	86.576	ENSAPEG00000020016	-	93	85.961	Amphiprion_percula
ENSMZEG00005028002	-	78	65.217	ENSATEG00000014425	srrt	81	65.106	Anabas_testudineus
ENSMZEG00005028002	-	59	91.473	ENSATEG00000003652	-	95	91.913	Anabas_testudineus
ENSMZEG00005028002	-	53	63.057	ENSACAG00000001014	SRRT	54	61.814	Anolis_carolinensis
ENSMZEG00005028002	-	52	63.636	ENSANAG00000031718	SRRT	56	61.212	Aotus_nancymaae
ENSMZEG00005028002	-	52	65.652	ENSACLG00000013156	srrt	50	65.665	Astatotilapia_calliptera
ENSMZEG00005028002	-	100	99.770	ENSACLG00000009423	-	100	99.770	Astatotilapia_calliptera
ENSMZEG00005028002	-	52	63.848	ENSBTAG00000001134	SRRT	55	61.414	Bos_taurus
ENSMZEG00005028002	-	59	41.163	WBGene00017085	E01A2.2	85	39.381	Caenorhabditis_elegans
ENSMZEG00005028002	-	52	63.848	ENSCJAG00000014917	SRRT	56	61.414	Callithrix_jacchus
ENSMZEG00005028002	-	96	56.028	ENSCAFG00000023538	SRRT	93	51.773	Canis_familiaris
ENSMZEG00005028002	-	96	55.991	ENSCAFG00020013358	SRRT	97	50.539	Canis_lupus_dingo
ENSMZEG00005028002	-	52	63.636	ENSCHIG00000010495	SRRT	56	61.100	Capra_hircus
ENSMZEG00005028002	-	52	63.404	ENSTSYG00000036426	SRRT	96	52.404	Carlito_syrichta
ENSMZEG00005028002	-	52	64.795	ENSCAPG00000013586	SRRT	94	57.800	Cavia_aperea
ENSMZEG00005028002	-	52	63.713	ENSCPOG00000001739	SRRT	93	52.656	Cavia_porcellus
ENSMZEG00005028002	-	52	63.636	ENSCCAG00000015877	SRRT	56	61.212	Cebus_capucinus
ENSMZEG00005028002	-	52	63.636	ENSCATG00000036306	SRRT	56	61.212	Cercocebus_atys
ENSMZEG00005028002	-	52	63.636	ENSCLAG00000007568	SRRT	94	57.344	Chinchilla_lanigera
ENSMZEG00005028002	-	52	63.636	ENSCSAG00000017996	SRRT	55	61.212	Chlorocebus_sabaeus
ENSMZEG00005028002	-	52	60.544	ENSCHOG00000007815	SRRT	64	63.235	Choloepus_hoffmanni
ENSMZEG00005028002	-	68	60.185	ENSCPBG00000011553	SRRT	75	58.252	Chrysemys_picta_bellii
ENSMZEG00005028002	-	100	38.639	ENSCSAVG00000008394	-	77	52.450	Ciona_savignyi
ENSMZEG00005028002	-	52	63.617	ENSCANG00000034556	SRRT	55	60.896	Colobus_angolensis_palliatus
ENSMZEG00005028002	-	96	55.670	ENSCGRG00001001594	Srrt	93	52.830	Cricetulus_griseus_chok1gshd
ENSMZEG00005028002	-	96	51.484	ENSCGRG00000007292	Srrt	94	57.485	Cricetulus_griseus_crigri
ENSMZEG00005028002	-	96	52.982	ENSCSEG00000017878	srrt	50	59.785	Cynoglossus_semilaevis
ENSMZEG00005028002	-	82	91.262	ENSCSEG00000005233	-	85	91.262	Cynoglossus_semilaevis
ENSMZEG00005028002	-	90	78.399	ENSCVAG00000017344	-	91	77.273	Cyprinodon_variegatus
ENSMZEG00005028002	-	94	57.092	ENSCVAG00000019848	srrt	93	57.314	Cyprinodon_variegatus
ENSMZEG00005028002	-	96	56.865	ENSDARG00000017762	srrt	52	65.409	Danio_rerio
ENSMZEG00005028002	-	52	63.636	ENSDNOG00000003851	SRRT	93	52.246	Dasypus_novemcinctus
ENSMZEG00005028002	-	96	55.683	ENSDORG00000005584	Srrt	94	58.333	Dipodomys_ordii
ENSMZEG00005028002	-	74	51.463	FBgn0033062	Ars2	59	49.787	Drosophila_melanogaster
ENSMZEG00005028002	-	73	61.331	ENSETEG00000016175	SRRT	70	59.557	Echinops_telfairi
ENSMZEG00005028002	-	68	59.539	ENSEBUG00000008517	-	77	59.072	Eptatretus_burgeri
ENSMZEG00005028002	-	96	55.734	ENSEASG00005016956	SRRT	93	52.837	Equus_asinus_asinus
ENSMZEG00005028002	-	96	55.734	ENSECAG00000012292	SRRT	93	52.837	Equus_caballus
ENSMZEG00005028002	-	83	60.714	ENSEEUG00000009117	SRRT	70	58.754	Erinaceus_europaeus
ENSMZEG00005028002	-	93	67.769	ENSELUG00000021216	-	93	65.768	Esox_lucius
ENSMZEG00005028002	-	96	55.454	ENSFCAG00000006855	SRRT	93	52.128	Felis_catus
ENSMZEG00005028002	-	52	61.171	ENSFDAG00000021347	SRRT	93	55.602	Fukomys_damarensis
ENSMZEG00005028002	-	53	77.004	ENSFHEG00000004105	-	96	76.793	Fundulus_heteroclitus
ENSMZEG00005028002	-	73	66.256	ENSFHEG00000002756	srrt	82	66.667	Fundulus_heteroclitus
ENSMZEG00005028002	-	96	52.775	ENSGMOG00000018619	srrt	52	61.702	Gadus_morhua
ENSMZEG00005028002	-	98	76.588	ENSGAFG00000020383	-	93	75.956	Gambusia_affinis
ENSMZEG00005028002	-	52	66.522	ENSGAFG00000005423	srrt	53	65.684	Gambusia_affinis
ENSMZEG00005028002	-	93	73.678	ENSGACG00000001100	-	93	74.762	Gasterosteus_aculeatus
ENSMZEG00005028002	-	52	63.636	ENSGGOG00000001508	SRRT	93	51.781	Gorilla_gorilla
ENSMZEG00005028002	-	52	65.652	ENSHBUG00000002942	srrt	50	65.665	Haplochromis_burtoni
ENSMZEG00005028002	-	96	55.200	ENSHGLG00000008344	Srrt	94	57.143	Heterocephalus_glaber_female
ENSMZEG00005028002	-	96	55.696	ENSHGLG00100018857	Srrt	94	57.841	Heterocephalus_glaber_male
ENSMZEG00005028002	-	98	72.588	ENSHCOG00000008904	-	97	71.412	Hippocampus_comes
ENSMZEG00005028002	-	90	65.517	ENSHCOG00000005403	srrt	93	52.330	Hippocampus_comes
ENSMZEG00005028002	-	52	65.875	ENSIPUG00000021150	srrt	53	66.105	Ictalurus_punctatus
ENSMZEG00005028002	-	52	63.617	ENSSTOG00000013776	SRRT	93	52.019	Ictidomys_tridecemlineatus
ENSMZEG00005028002	-	96	55.916	ENSJJAG00000010446	Srrt	93	58.452	Jaculus_jaculus
ENSMZEG00005028002	-	79	64.842	ENSKMAG00000013599	srrt	93	55.596	Kryptolebias_marmoratus
ENSMZEG00005028002	-	93	81.288	ENSKMAG00000008468	-	93	81.045	Kryptolebias_marmoratus
ENSMZEG00005028002	-	79	65.806	ENSLBEG00000016308	srrt	79	65.474	Labrus_bergylta
ENSMZEG00005028002	-	66	78.073	ENSLBEG00000028983	-	97	76.527	Labrus_bergylta
ENSMZEG00005028002	-	94	47.759	ENSLACG00000001089	SRRT	76	60.194	Latimeria_chalumnae
ENSMZEG00005028002	-	70	68.125	ENSLOCG00000013658	srrt	53	56.438	Lepisosteus_oculatus
ENSMZEG00005028002	-	52	63.636	ENSLAFG00000007725	SRRT	93	52.257	Loxodonta_africana
ENSMZEG00005028002	-	52	63.617	ENSMFAG00000033745	SRRT	58	60.040	Macaca_fascicularis
ENSMZEG00005028002	-	96	54.949	ENSMMUG00000021255	SRRT	93	52.342	Macaca_mulatta
ENSMZEG00005028002	-	52	63.636	ENSMNEG00000041864	SRRT	56	61.212	Macaca_nemestrina
ENSMZEG00005028002	-	52	63.617	ENSMLEG00000029479	SRRT	57	60.040	Mandrillus_leucophaeus
ENSMZEG00005028002	-	52	65.435	ENSMAMG00000014311	srrt	93	56.659	Mastacembelus_armatus
ENSMZEG00005028002	-	98	88.146	ENSMAMG00000010681	-	93	86.593	Mastacembelus_armatus
ENSMZEG00005028002	-	52	65.652	ENSMZEG00005016135	srrt	50	65.665	Maylandia_zebra
ENSMZEG00005028002	-	96	55.530	ENSMAUG00000011386	Srrt	94	58.200	Mesocricetus_auratus
ENSMZEG00005028002	-	52	63.848	ENSMICG00000009471	SRRT	95	51.874	Microcebus_murinus
ENSMZEG00005028002	-	52	63.425	ENSMOCG00000001971	Srrt	94	58.384	Microtus_ochrogaster
ENSMZEG00005028002	-	95	56.674	ENSMMOG00000016399	srrt	80	64.557	Mola_mola
ENSMZEG00005028002	-	84	78.052	ENSMMOG00000011137	-	88	76.054	Mola_mola
ENSMZEG00005028002	-	52	62.316	ENSMODG00000004862	SRRT	94	59.524	Monodelphis_domestica
ENSMZEG00005028002	-	88	54.203	ENSMALG00000018604	srrt	55	61.088	Monopterus_albus
ENSMZEG00005028002	-	66	62.667	ENSMALG00000005567	-	87	68.172	Monopterus_albus
ENSMZEG00005028002	-	96	56.446	MGP_CAROLIEiJ_G0027870	Srrt	94	58.788	Mus_caroli
ENSMZEG00005028002	-	96	56.446	ENSMUSG00000037364	Srrt	94	58.788	Mus_musculus
ENSMZEG00005028002	-	52	64.378	MGP_PahariEiJ_G0024456	Srrt	94	58.990	Mus_pahari
ENSMZEG00005028002	-	96	56.446	MGP_SPRETEiJ_G0028875	Srrt	94	58.788	Mus_spretus
ENSMZEG00005028002	-	96	55.913	ENSMPUG00000015839	SRRT	93	52.009	Mustela_putorius_furo
ENSMZEG00005028002	-	96	55.798	ENSMLUG00000009975	SRRT	93	52.768	Myotis_lucifugus
ENSMZEG00005028002	-	96	54.691	ENSNGAG00000023715	Srrt	67	61.212	Nannospalax_galili
ENSMZEG00005028002	-	52	65.368	ENSNBRG00000019100	srrt	52	64.731	Neolamprologus_brichardi
ENSMZEG00005028002	-	95	49.243	ENSNLEG00000011987	SRRT	55	56.144	Nomascus_leucogenys
ENSMZEG00005028002	-	94	46.588	ENSMEUG00000011941	SRRT	54	50.303	Notamacropus_eugenii
ENSMZEG00005028002	-	61	59.701	ENSOPRG00000002502	-	67	57.857	Ochotona_princeps
ENSMZEG00005028002	-	52	64.579	ENSODEG00000016856	SRRT	93	57.841	Octodon_degus
ENSMZEG00005028002	-	52	65.652	ENSONIG00000004242	srrt	52	64.421	Oreochromis_niloticus
ENSMZEG00005028002	-	100	96.811	ENSONIG00000016080	-	100	96.811	Oreochromis_niloticus
ENSMZEG00005028002	-	96	56.050	ENSORLG00000008120	srrt	53	65.401	Oryzias_latipes
ENSMZEG00005028002	-	96	55.822	ENSORLG00020003058	srrt	53	65.190	Oryzias_latipes_hni
ENSMZEG00005028002	-	96	55.936	ENSORLG00015008062	srrt	53	65.401	Oryzias_latipes_hsok
ENSMZEG00005028002	-	98	79.294	ENSOMEG00000006963	-	93	78.175	Oryzias_melastigma
ENSMZEG00005028002	-	96	56.632	ENSOMEG00000003155	srrt	83	65.458	Oryzias_melastigma
ENSMZEG00005028002	-	52	63.636	ENSOGAG00000017242	SRRT	93	52.364	Otolemur_garnettii
ENSMZEG00005028002	-	52	63.617	ENSOARG00000015645	SRRT	56	60.159	Ovis_aries
ENSMZEG00005028002	-	52	63.617	ENSPPAG00000041090	SRRT	55	60.896	Pan_paniscus
ENSMZEG00005028002	-	96	55.196	ENSPPRG00000009557	SRRT	93	52.438	Panthera_pardus
ENSMZEG00005028002	-	96	55.568	ENSPTIG00000014355	SRRT	93	52.246	Panthera_tigris_altaica
ENSMZEG00005028002	-	52	63.617	ENSPTRG00000019511	SRRT	59	58.250	Pan_troglodytes
ENSMZEG00005028002	-	52	62.578	ENSPANG00000020763	SRRT	57	60.040	Papio_anubis
ENSMZEG00005028002	-	94	57.109	ENSPKIG00000022212	-	54	66.387	Paramormyrops_kingsleyae
ENSMZEG00005028002	-	96	56.678	ENSPKIG00000005434	srrt	79	65.612	Paramormyrops_kingsleyae
ENSMZEG00005028002	-	78	63.948	ENSPMGG00000002841	srrt	82	63.655	Periophthalmus_magnuspinnatus
ENSMZEG00005028002	-	52	64.363	ENSPEMG00000010834	Srrt	93	58.045	Peromyscus_maniculatus_bairdii
ENSMZEG00005028002	-	96	50.457	ENSPMAG00000009614	-	80	57.464	Petromyzon_marinus
ENSMZEG00005028002	-	52	62.605	ENSPCIG00000000816	SRRT	55	61.134	Phascolarctos_cinereus
ENSMZEG00005028002	-	98	76.263	ENSPFOG00000016554	-	93	75.921	Poecilia_formosa
ENSMZEG00005028002	-	52	66.957	ENSPFOG00000005704	srrt	93	57.416	Poecilia_formosa
ENSMZEG00005028002	-	94	57.260	ENSPLAG00000021992	srrt	51	65.880	Poecilia_latipinna
ENSMZEG00005028002	-	98	75.822	ENSPLAG00000004526	-	93	75.277	Poecilia_latipinna
ENSMZEG00005028002	-	95	75.604	ENSPMEG00000001520	-	90	75.518	Poecilia_mexicana
ENSMZEG00005028002	-	94	52.506	ENSPMEG00000001182	srrt	93	57.177	Poecilia_mexicana
ENSMZEG00005028002	-	94	57.515	ENSPREG00000022308	srrt	93	57.536	Poecilia_reticulata
ENSMZEG00005028002	-	52	63.636	ENSPCOG00000025751	SRRT	93	52.246	Propithecus_coquereli
ENSMZEG00005028002	-	60	61.111	ENSPVAG00000000834	SRRT	82	61.644	Pteropus_vampyrus
ENSMZEG00005028002	-	52	65.652	ENSPNYG00000018710	srrt	52	65.665	Pundamilia_nyererei
ENSMZEG00005028002	-	72	61.635	ENSPNAG00000010629	srrt	68	56.716	Pygocentrus_nattereri
ENSMZEG00005028002	-	52	54.487	ENSRNOG00000048277	AABR07035787.1	97	52.653	Rattus_norvegicus
ENSMZEG00005028002	-	52	63.636	ENSRBIG00000035718	SRRT	57	60.040	Rhinopithecus_bieti
ENSMZEG00005028002	-	52	63.636	ENSRROG00000030622	SRRT	57	60.040	Rhinopithecus_roxellana
ENSMZEG00005028002	-	52	63.636	ENSSBOG00000033570	SRRT	56	61.212	Saimiri_boliviensis_boliviensis
ENSMZEG00005028002	-	72	52.402	ENSSHAG00000007349	-	77	61.089	Sarcophilus_harrisii
ENSMZEG00005028002	-	94	57.870	ENSSFOG00015017293	srrt	52	67.715	Scleropages_formosus
ENSMZEG00005028002	-	89	66.739	ENSSMAG00000015342	srrt	92	65.672	Scophthalmus_maximus
ENSMZEG00005028002	-	59	75.908	ENSSMAG00000018195	-	93	70.838	Scophthalmus_maximus
ENSMZEG00005028002	-	76	66.379	ENSSDUG00000012049	srrt	88	57.348	Seriola_dumerili
ENSMZEG00005028002	-	53	73.305	ENSSDUG00000002051	-	96	72.689	Seriola_dumerili
ENSMZEG00005028002	-	76	66.885	ENSSLDG00000017477	srrt	79	66.094	Seriola_lalandi_dorsalis
ENSMZEG00005028002	-	86	85.733	ENSSPAG00000018943	-	96	80.810	Stegastes_partitus
ENSMZEG00005028002	-	52	65.659	ENSSPAG00000005665	srrt	51	65.885	Stegastes_partitus
ENSMZEG00005028002	-	96	56.207	ENSTRUG00000016075	srrt	53	63.732	Takifugu_rubripes
ENSMZEG00005028002	-	90	76.620	ENSTRUG00000000023	-	91	75.095	Takifugu_rubripes
ENSMZEG00005028002	-	75	51.542	ENSTNIG00000011779	srrt	72	64.000	Tetraodon_nigroviridis
ENSMZEG00005028002	-	93	73.438	ENSTNIG00000003111	-	93	72.282	Tetraodon_nigroviridis
ENSMZEG00005028002	-	100	56.278	ENSTTRG00000011104	SRRT	93	52.246	Tursiops_truncatus
ENSMZEG00005028002	-	96	55.415	ENSUAMG00000027997	SRRT	57	61.212	Ursus_americanus
ENSMZEG00005028002	-	96	55.454	ENSUMAG00000011295	SRRT	93	52.128	Ursus_maritimus
ENSMZEG00005028002	-	96	56.028	ENSVVUG00000023572	SRRT	93	51.773	Vulpes_vulpes
ENSMZEG00005028002	-	78	60.000	ENSXETG00000025124	srrt	75	59.205	Xenopus_tropicalis
ENSMZEG00005028002	-	53	69.197	ENSXCOG00000013105	-	93	69.414	Xiphophorus_couchianus
ENSMZEG00005028002	-	96	57.639	ENSXMAG00000007627	srrt	83	65.466	Xiphophorus_maculatus
ENSMZEG00005028002	-	98	76.941	ENSXMAG00000002090	-	93	76.695	Xiphophorus_maculatus