EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005028080 (Gene tree)
Gene ID: 101471101
Gene Symbol: xrcc6
Alias: Ku autoantigen|Ku70|g22p1|wu:fi87b06|zgc:64131
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 4969 bases
Position: chrAGTA05000161.1:193984-198952
Accession: 101471101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037654	SAP	PF02037.27	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005038964	-	2258	XM_004557599	ENSMZEP00005037654	610 (aa)	XP_004557656	UPI000329DFCE

Gene Model

Click here to download ENSMZEG00005028080's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005028080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005028080	xrcc6	99	56.250	ENSG00000196419	XRCC6	99	56.414	Homo_sapiens
ENSMZEG00005028080	xrcc6	99	88.013	ENSAPOG00000012704	xrcc6	100	88.013	Acanthochromis_polyacanthus
ENSMZEG00005028080	xrcc6	100	92.295	ENSACIG00000021277	xrcc6	100	92.295	Amphilophus_citrinellus
ENSMZEG00005028080	xrcc6	100	87.869	ENSAOCG00000021344	xrcc6	100	87.869	Amphiprion_ocellaris
ENSMZEG00005028080	xrcc6	100	88.033	ENSAPEG00000020712	xrcc6	100	88.033	Amphiprion_percula
ENSMZEG00005028080	xrcc6	100	89.016	ENSATEG00000007119	xrcc6	100	89.016	Anabas_testudineus
ENSMZEG00005028080	xrcc6	89	60.623	ENSAPLG00000004469	XRCC6	98	60.623	Anas_platyrhynchos
ENSMZEG00005028080	xrcc6	99	56.250	ENSANAG00000018684	XRCC6	98	57.353	Aotus_nancymaae
ENSMZEG00005028080	xrcc6	99	49.587	ENSANAG00000020017	-	99	49.587	Aotus_nancymaae
ENSMZEG00005028080	xrcc6	99	48.118	ENSANAG00000023445	-	99	48.118	Aotus_nancymaae
ENSMZEG00005028080	xrcc6	99	50.164	ENSANAG00000035230	-	99	50.164	Aotus_nancymaae
ENSMZEG00005028080	xrcc6	100	99.836	ENSACLG00000018608	xrcc6	100	99.836	Astatotilapia_calliptera
ENSMZEG00005028080	xrcc6	99	77.504	ENSAMXG00000007545	xrcc6	99	77.632	Astyanax_mexicanus
ENSMZEG00005028080	xrcc6	99	56.250	ENSCJAG00000045512	XRCC6	99	56.250	Callithrix_jacchus
ENSMZEG00005028080	xrcc6	99	55.099	ENSTSYG00000011348	XRCC6	99	55.263	Carlito_syrichta
ENSMZEG00005028080	xrcc6	99	45.559	ENSCCAG00000035711	-	99	45.559	Cebus_capucinus
ENSMZEG00005028080	xrcc6	99	47.438	ENSCCAG00000037663	-	96	47.273	Cebus_capucinus
ENSMZEG00005028080	xrcc6	92	54.839	ENSCCAG00000030468	-	99	54.839	Cebus_capucinus
ENSMZEG00005028080	xrcc6	99	52.961	ENSCCAG00000030041	-	94	53.454	Cebus_capucinus
ENSMZEG00005028080	xrcc6	99	55.757	ENSCATG00000042366	XRCC6	99	56.414	Cercocebus_atys
ENSMZEG00005028080	xrcc6	99	55.684	ENSCLAG00000016669	XRCC6	99	55.848	Chinchilla_lanigera
ENSMZEG00005028080	xrcc6	99	55.757	ENSCSAG00000005784	XRCC6	99	56.414	Chlorocebus_sabaeus
ENSMZEG00005028080	xrcc6	99	58.649	ENSCPBG00000020535	XRCC6	99	58.320	Chrysemys_picta_bellii
ENSMZEG00005028080	xrcc6	98	35.000	ENSCING00000000633	-	95	34.768	Ciona_intestinalis
ENSMZEG00005028080	xrcc6	99	55.757	ENSCANG00000031032	XRCC6	99	56.414	Colobus_angolensis_palliatus
ENSMZEG00005028080	xrcc6	99	52.145	ENSCGRG00001019029	Xrcc6	99	52.145	Cricetulus_griseus_chok1gshd
ENSMZEG00005028080	xrcc6	99	56.106	ENSCGRG00000001528	Xrcc6	99	56.106	Cricetulus_griseus_crigri
ENSMZEG00005028080	xrcc6	100	80.328	ENSCSEG00000020434	xrcc6	100	80.328	Cynoglossus_semilaevis
ENSMZEG00005028080	xrcc6	100	85.246	ENSCVAG00000002189	xrcc6	100	85.246	Cyprinodon_variegatus
ENSMZEG00005028080	xrcc6	99	75.369	ENSDARG00000071551	xrcc6	99	75.041	Danio_rerio
ENSMZEG00005028080	xrcc6	77	52.439	ENSETEG00000015333	-	67	52.439	Echinops_telfairi
ENSMZEG00005028080	xrcc6	99	55.189	ENSEASG00005001514	XRCC6	99	55.189	Equus_asinus_asinus
ENSMZEG00005028080	xrcc6	99	55.189	ENSECAG00000017563	XRCC6	99	55.615	Equus_caballus
ENSMZEG00005028080	xrcc6	100	75.246	ENSELUG00000020301	xrcc6	100	75.246	Esox_lucius
ENSMZEG00005028080	xrcc6	99	58.429	ENSFALG00000011908	XRCC6	96	58.592	Ficedula_albicollis
ENSMZEG00005028080	xrcc6	100	86.885	ENSFHEG00000016833	xrcc6	100	86.885	Fundulus_heteroclitus
ENSMZEG00005028080	xrcc6	99	68.893	ENSGMOG00000013524	xrcc6	100	68.730	Gadus_morhua
ENSMZEG00005028080	xrcc6	99	58.007	ENSGALG00000011932	XRCC6	99	58.170	Gallus_gallus
ENSMZEG00005028080	xrcc6	100	83.770	ENSGAFG00000008130	xrcc6	100	83.770	Gambusia_affinis
ENSMZEG00005028080	xrcc6	99	83.550	ENSGACG00000004868	xrcc6	99	82.410	Gasterosteus_aculeatus
ENSMZEG00005028080	xrcc6	99	58.484	ENSGAGG00000017518	XRCC6	99	58.155	Gopherus_agassizii
ENSMZEG00005028080	xrcc6	99	56.250	ENSGGOG00000015885	XRCC6	99	56.414	Gorilla_gorilla
ENSMZEG00005028080	xrcc6	93	99.470	ENSHBUG00000023281	xrcc6	100	99.470	Haplochromis_burtoni
ENSMZEG00005028080	xrcc6	99	55.281	ENSHGLG00000018078	XRCC6	99	55.116	Heterocephalus_glaber_female
ENSMZEG00005028080	xrcc6	99	55.281	ENSHGLG00100011264	XRCC6	99	55.116	Heterocephalus_glaber_male
ENSMZEG00005028080	xrcc6	100	80.000	ENSHCOG00000009821	xrcc6	100	80.000	Hippocampus_comes
ENSMZEG00005028080	xrcc6	99	75.698	ENSIPUG00000000767	xrcc6	99	75.822	Ictalurus_punctatus
ENSMZEG00005028080	xrcc6	99	55.519	ENSSTOG00000009490	XRCC6	99	55.189	Ictidomys_tridecemlineatus
ENSMZEG00005028080	xrcc6	99	51.151	ENSJJAG00000017136	Xrcc6	99	52.217	Jaculus_jaculus
ENSMZEG00005028080	xrcc6	99	85.878	ENSKMAG00000002141	xrcc6	99	85.878	Kryptolebias_marmoratus
ENSMZEG00005028080	xrcc6	99	86.349	ENSLBEG00000002691	xrcc6	99	86.349	Labrus_bergylta
ENSMZEG00005028080	xrcc6	87	69.388	ENSLOCG00000011533	xrcc6	99	69.388	Lepisosteus_oculatus
ENSMZEG00005028080	xrcc6	99	55.757	ENSMFAG00000003352	XRCC6	99	56.414	Macaca_fascicularis
ENSMZEG00005028080	xrcc6	99	55.757	ENSMMUG00000001856	XRCC6	99	56.414	Macaca_mulatta
ENSMZEG00005028080	xrcc6	99	55.757	ENSMNEG00000035076	XRCC6	99	56.414	Macaca_nemestrina
ENSMZEG00005028080	xrcc6	99	55.757	ENSMLEG00000019869	XRCC6	99	56.414	Mandrillus_leucophaeus
ENSMZEG00005028080	xrcc6	96	83.986	ENSMAMG00000003405	xrcc6	97	83.959	Mastacembelus_armatus
ENSMZEG00005028080	xrcc6	100	85.106	ENSMAMG00000003368	xrcc6	100	85.106	Mastacembelus_armatus
ENSMZEG00005028080	xrcc6	99	58.564	ENSMGAG00000012146	XRCC6	98	58.728	Meleagris_gallopavo
ENSMZEG00005028080	xrcc6	99	56.106	ENSMAUG00000017340	Xrcc6	99	56.106	Mesocricetus_auratus
ENSMZEG00005028080	xrcc6	99	56.271	ENSMOCG00000015717	Xrcc6	99	56.436	Microtus_ochrogaster
ENSMZEG00005028080	xrcc6	100	83.770	ENSMMOG00000003536	xrcc6	99	83.770	Mola_mola
ENSMZEG00005028080	xrcc6	100	86.885	ENSMALG00000013912	xrcc6	95	86.885	Monopterus_albus
ENSMZEG00005028080	xrcc6	99	53.443	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.443	Mus_caroli
ENSMZEG00005028080	xrcc6	99	57.213	ENSMUSG00000022471	Xrcc6	99	59.696	Mus_musculus
ENSMZEG00005028080	xrcc6	99	56.885	MGP_PahariEiJ_G0020069	Xrcc6	99	56.885	Mus_pahari
ENSMZEG00005028080	xrcc6	96	57.705	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.705	Mus_spretus
ENSMZEG00005028080	xrcc6	99	55.776	ENSNGAG00000013750	Xrcc6	99	55.776	Nannospalax_galili
ENSMZEG00005028080	xrcc6	100	98.361	ENSNBRG00000004125	xrcc6	100	98.361	Neolamprologus_brichardi
ENSMZEG00005028080	xrcc6	95	56.724	ENSOPRG00000002386	XRCC6	99	56.724	Ochotona_princeps
ENSMZEG00005028080	xrcc6	99	54.992	ENSODEG00000015847	XRCC6	99	54.992	Octodon_degus
ENSMZEG00005028080	xrcc6	100	97.213	ENSONIG00000019715	xrcc6	100	97.213	Oreochromis_niloticus
ENSMZEG00005028080	xrcc6	68	58.010	ENSOANG00000011328	XRCC6	99	58.010	Ornithorhynchus_anatinus
ENSMZEG00005028080	xrcc6	99	55.519	ENSOCUG00000006948	XRCC6	99	55.519	Oryctolagus_cuniculus
ENSMZEG00005028080	xrcc6	100	84.779	ENSORLG00020007820	xrcc6	100	84.779	Oryzias_latipes_hni
ENSMZEG00005028080	xrcc6	100	84.452	ENSORLG00015006406	xrcc6	100	84.452	Oryzias_latipes_hsok
ENSMZEG00005028080	xrcc6	100	85.270	ENSOMEG00000008998	xrcc6	100	85.270	Oryzias_melastigma
ENSMZEG00005028080	xrcc6	99	55.848	ENSOGAG00000008821	XRCC6	99	55.519	Otolemur_garnettii
ENSMZEG00005028080	xrcc6	90	57.143	ENSPPAG00000037167	XRCC6	99	57.143	Pan_paniscus
ENSMZEG00005028080	xrcc6	99	56.250	ENSPTRG00000045824	XRCC6	99	56.414	Pan_troglodytes
ENSMZEG00005028080	xrcc6	99	56.250	ENSPTRG00000022548	XRCC6	99	56.414	Pan_troglodytes
ENSMZEG00005028080	xrcc6	99	55.592	ENSPANG00000001252	XRCC6	97	58.772	Papio_anubis
ENSMZEG00005028080	xrcc6	99	71.875	ENSPKIG00000003974	xrcc6	99	71.875	Paramormyrops_kingsleyae
ENSMZEG00005028080	xrcc6	99	81.063	ENSPMGG00000014220	xrcc6	100	81.229	Periophthalmus_magnuspinnatus
ENSMZEG00005028080	xrcc6	99	55.941	ENSPEMG00000023446	Xrcc6	99	55.941	Peromyscus_maniculatus_bairdii
ENSMZEG00005028080	xrcc6	99	57.331	ENSPCIG00000026409	XRCC6	99	57.166	Phascolarctos_cinereus
ENSMZEG00005028080	xrcc6	100	85.738	ENSPFOG00000017173	xrcc6	100	85.738	Poecilia_formosa
ENSMZEG00005028080	xrcc6	100	85.246	ENSPLAG00000000562	xrcc6	100	85.246	Poecilia_latipinna
ENSMZEG00005028080	xrcc6	100	85.574	ENSPMEG00000018478	xrcc6	100	85.574	Poecilia_mexicana
ENSMZEG00005028080	xrcc6	100	85.458	ENSPREG00000020957	xrcc6	93	85.458	Poecilia_reticulata
ENSMZEG00005028080	xrcc6	99	50.658	ENSPPYG00000011876	XRCC6	99	50.822	Pongo_abelii
ENSMZEG00005028080	xrcc6	99	55.611	ENSPVAG00000001168	XRCC6	99	55.116	Pteropus_vampyrus
ENSMZEG00005028080	xrcc6	100	99.508	ENSPNYG00000003815	xrcc6	100	94.696	Pundamilia_nyererei
ENSMZEG00005028080	xrcc6	99	56.230	ENSRNOG00000006392	Xrcc6	99	56.393	Rattus_norvegicus
ENSMZEG00005028080	xrcc6	99	51.480	ENSRBIG00000039794	XRCC6	99	52.138	Rhinopithecus_bieti
ENSMZEG00005028080	xrcc6	99	55.757	ENSRROG00000030297	XRCC6	99	56.414	Rhinopithecus_roxellana
ENSMZEG00005028080	xrcc6	66	51.358	ENSSBOG00000024724	-	98	51.358	Saimiri_boliviensis_boliviensis
ENSMZEG00005028080	xrcc6	99	56.250	ENSSHAG00000010790	XRCC6	99	56.086	Sarcophilus_harrisii
ENSMZEG00005028080	xrcc6	99	73.563	ENSSFOG00015014409	xrcc6	99	73.684	Scleropages_formosus
ENSMZEG00005028080	xrcc6	100	87.541	ENSSMAG00000006496	xrcc6	100	87.541	Scophthalmus_maximus
ENSMZEG00005028080	xrcc6	100	88.361	ENSSDUG00000007542	xrcc6	100	88.361	Seriola_dumerili
ENSMZEG00005028080	xrcc6	100	87.705	ENSSLDG00000009974	xrcc6	100	87.705	Seriola_lalandi_dorsalis
ENSMZEG00005028080	xrcc6	99	58.388	ENSSPUG00000012086	XRCC6	99	58.553	Sphenodon_punctatus
ENSMZEG00005028080	xrcc6	100	87.541	ENSSPAG00000015199	xrcc6	100	87.541	Stegastes_partitus
ENSMZEG00005028080	xrcc6	95	59.622	ENSTGUG00000009852	-	94	59.725	Taeniopygia_guttata
ENSMZEG00005028080	xrcc6	99	79.475	ENSTRUG00000017070	xrcc6	99	79.967	Takifugu_rubripes
ENSMZEG00005028080	xrcc6	96	79.357	ENSTNIG00000012947	xrcc6	99	79.357	Tetraodon_nigroviridis
ENSMZEG00005028080	xrcc6	95	52.759	ENSTBEG00000011736	XRCC6	99	52.759	Tupaia_belangeri
ENSMZEG00005028080	xrcc6	90	52.960	ENSTTRG00000006749	XRCC6	90	53.271	Tursiops_truncatus
ENSMZEG00005028080	xrcc6	100	85.574	ENSXMAG00000009691	xrcc6	100	85.574	Xiphophorus_maculatus