EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005028115 (Gene tree)
Gene ID: 112429838
Gene Symbol: SF3B5
Alias: MGC3133|SF3b10|Ysf3
Full Name: splicing factor 3B subunit 5-like
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 261 bases
Position: chrAGTA05000913.1:6269-6529
Accession: 112429838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037721	SF3b10	PF07189.11	5.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005039035	SF3B5-201	261	XM_024799220	ENSMZEP00005037721	86 (aa)	XP_024654988	UPI00022AF4C7

Gene Model

Click here to download ENSMZEG00005028115's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005028115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005028115	SF3B5	99	94.118	ENSG00000169976	SF3B5	99	94.118	Homo_sapiens
ENSMZEG00005028115	SF3B5	100	97.674	ENSAPOG00000001721	sf3b5	100	97.674	Acanthochromis_polyacanthus
ENSMZEG00005028115	SF3B5	100	100.000	ENSACIG00000008106	sf3b5	100	100.000	Amphilophus_citrinellus
ENSMZEG00005028115	SF3B5	100	97.674	ENSAOCG00000023367	sf3b5	100	97.674	Amphiprion_ocellaris
ENSMZEG00005028115	SF3B5	100	97.674	ENSAPEG00000004605	sf3b5	100	97.674	Amphiprion_percula
ENSMZEG00005028115	SF3B5	100	98.837	ENSATEG00000009720	sf3b5	100	98.837	Anabas_testudineus
ENSMZEG00005028115	SF3B5	100	93.023	ENSACAG00000007948	SF3B5	100	93.023	Anolis_carolinensis
ENSMZEG00005028115	SF3B5	99	94.118	ENSANAG00000019999	SF3B5	99	94.118	Aotus_nancymaae
ENSMZEG00005028115	SF3B5	100	100.000	ENSACLG00000022410	sf3b5	100	100.000	Astatotilapia_calliptera
ENSMZEG00005028115	SF3B5	99	94.118	ENSBTAG00000009795	SF3B5	99	94.118	Bos_taurus
ENSMZEG00005028115	SF3B5	99	94.118	ENSCJAG00000046566	SF3B5	99	94.118	Callithrix_jacchus
ENSMZEG00005028115	SF3B5	99	94.118	ENSCAFG00000032495	SF3B5	99	94.118	Canis_familiaris
ENSMZEG00005028115	SF3B5	99	94.118	ENSCAFG00020000873	SF3B5	99	94.118	Canis_lupus_dingo
ENSMZEG00005028115	SF3B5	99	94.118	ENSCHIG00000007987	SF3B5	99	94.118	Capra_hircus
ENSMZEG00005028115	SF3B5	99	94.118	ENSTSYG00000012236	SF3B5	99	94.118	Carlito_syrichta
ENSMZEG00005028115	SF3B5	99	94.118	ENSCPOG00000012435	SF3B5	99	94.118	Cavia_porcellus
ENSMZEG00005028115	SF3B5	99	94.118	ENSCCAG00000006528	SF3B5	99	94.118	Cebus_capucinus
ENSMZEG00005028115	SF3B5	99	94.118	ENSCATG00000010192	SF3B5	99	94.118	Cercocebus_atys
ENSMZEG00005028115	SF3B5	99	94.118	ENSCLAG00000017802	SF3B5	99	94.118	Chinchilla_lanigera
ENSMZEG00005028115	SF3B5	99	94.118	ENSCSAG00000000187	SF3B5	99	94.118	Chlorocebus_sabaeus
ENSMZEG00005028115	SF3B5	100	93.023	ENSCPBG00000017148	SF3B5	100	93.023	Chrysemys_picta_bellii
ENSMZEG00005028115	SF3B5	98	73.810	ENSCING00000021953	-	98	73.810	Ciona_intestinalis
ENSMZEG00005028115	SF3B5	99	94.118	ENSCANG00000002639	SF3B5	99	94.118	Colobus_angolensis_palliatus
ENSMZEG00005028115	SF3B5	99	92.941	ENSCGRG00001007249	Sf3b5	99	92.941	Cricetulus_griseus_chok1gshd
ENSMZEG00005028115	SF3B5	99	92.941	ENSCGRG00000019185	Sf3b5	99	92.941	Cricetulus_griseus_crigri
ENSMZEG00005028115	SF3B5	100	97.674	ENSCSEG00000003216	sf3b5	100	97.674	Cynoglossus_semilaevis
ENSMZEG00005028115	SF3B5	100	98.837	ENSCVAG00000005040	sf3b5	100	98.837	Cyprinodon_variegatus
ENSMZEG00005028115	SF3B5	100	96.512	ENSDARG00000016855	sf3b5	100	96.512	Danio_rerio
ENSMZEG00005028115	SF3B5	99	94.118	ENSDNOG00000048829	SF3B5	81	94.118	Dasypus_novemcinctus
ENSMZEG00005028115	SF3B5	99	94.118	ENSDORG00000005838	Sf3b5	99	94.118	Dipodomys_ordii
ENSMZEG00005028115	SF3B5	99	82.353	FBgn0040534	Sf3b5	100	82.353	Drosophila_melanogaster
ENSMZEG00005028115	SF3B5	99	94.118	ENSETEG00000004047	SF3B5	99	94.118	Echinops_telfairi
ENSMZEG00005028115	SF3B5	99	83.529	ENSEBUG00000002311	sf3b5	100	83.529	Eptatretus_burgeri
ENSMZEG00005028115	SF3B5	99	94.118	ENSEASG00005009522	SF3B5	99	94.118	Equus_asinus_asinus
ENSMZEG00005028115	SF3B5	99	94.118	ENSECAG00000005457	SF3B5	99	94.118	Equus_caballus
ENSMZEG00005028115	SF3B5	100	97.674	ENSELUG00000014290	SF3B5	100	97.674	Esox_lucius
ENSMZEG00005028115	SF3B5	99	94.118	ENSFCAG00000000936	SF3B5	99	94.118	Felis_catus
ENSMZEG00005028115	SF3B5	100	91.860	ENSFALG00000015012	SF3B5	100	91.860	Ficedula_albicollis
ENSMZEG00005028115	SF3B5	99	94.118	ENSFDAG00000003664	SF3B5	99	94.118	Fukomys_damarensis
ENSMZEG00005028115	SF3B5	100	98.837	ENSFHEG00000020301	sf3b5	100	98.837	Fundulus_heteroclitus
ENSMZEG00005028115	SF3B5	100	96.512	ENSGMOG00000019972	sf3b5	100	96.512	Gadus_morhua
ENSMZEG00005028115	SF3B5	100	94.186	ENSGALG00000030824	SF3B5	100	94.186	Gallus_gallus
ENSMZEG00005028115	SF3B5	100	98.837	ENSGAFG00000000271	sf3b5	100	98.837	Gambusia_affinis
ENSMZEG00005028115	SF3B5	100	98.837	ENSGACG00000010363	sf3b5	100	98.837	Gasterosteus_aculeatus
ENSMZEG00005028115	SF3B5	100	88.372	ENSGAGG00000000646	-	100	88.372	Gopherus_agassizii
ENSMZEG00005028115	SF3B5	100	93.023	ENSGAGG00000011434	SF3B5	100	93.023	Gopherus_agassizii
ENSMZEG00005028115	SF3B5	99	94.118	ENSGGOG00000001537	SF3B5	99	94.118	Gorilla_gorilla
ENSMZEG00005028115	SF3B5	100	100.000	ENSHBUG00000008925	sf3b5	100	100.000	Haplochromis_burtoni
ENSMZEG00005028115	SF3B5	99	94.118	ENSHGLG00000021406	SF3B5	99	94.118	Heterocephalus_glaber_female
ENSMZEG00005028115	SF3B5	99	94.118	ENSHGLG00100020370	SF3B5	99	94.118	Heterocephalus_glaber_male
ENSMZEG00005028115	SF3B5	100	97.674	ENSHCOG00000009115	-	100	97.674	Hippocampus_comes
ENSMZEG00005028115	SF3B5	100	97.674	ENSHCOG00000016806	sf3b5	100	97.674	Hippocampus_comes
ENSMZEG00005028115	SF3B5	100	97.674	ENSHCOG00000016802	sf3b5	100	97.674	Hippocampus_comes
ENSMZEG00005028115	SF3B5	100	96.512	ENSIPUG00000015166	sf3b5	100	96.512	Ictalurus_punctatus
ENSMZEG00005028115	SF3B5	99	94.118	ENSSTOG00000003347	SF3B5	99	94.118	Ictidomys_tridecemlineatus
ENSMZEG00005028115	SF3B5	99	94.118	ENSJJAG00000001857	Sf3b5	99	94.118	Jaculus_jaculus
ENSMZEG00005028115	SF3B5	100	98.837	ENSKMAG00000002249	sf3b5	100	98.837	Kryptolebias_marmoratus
ENSMZEG00005028115	SF3B5	100	98.837	ENSLBEG00000019847	sf3b5	100	98.837	Labrus_bergylta
ENSMZEG00005028115	SF3B5	100	91.860	ENSLACG00000000946	SF3B5	100	91.860	Latimeria_chalumnae
ENSMZEG00005028115	SF3B5	100	97.674	ENSLOCG00000017352	sf3b5	100	97.674	Lepisosteus_oculatus
ENSMZEG00005028115	SF3B5	99	94.118	ENSLAFG00000032489	SF3B5	99	94.118	Loxodonta_africana
ENSMZEG00005028115	SF3B5	99	94.118	ENSMFAG00000029753	SF3B5	99	94.118	Macaca_fascicularis
ENSMZEG00005028115	SF3B5	99	94.118	ENSMMUG00000047691	SF3B5	99	94.118	Macaca_mulatta
ENSMZEG00005028115	SF3B5	99	94.118	ENSMNEG00000028236	SF3B5	99	94.118	Macaca_nemestrina
ENSMZEG00005028115	SF3B5	99	94.118	ENSMLEG00000007622	SF3B5	99	94.118	Mandrillus_leucophaeus
ENSMZEG00005028115	SF3B5	100	97.674	ENSMAMG00000021639	sf3b5	100	97.674	Mastacembelus_armatus
ENSMZEG00005028115	SF3B5	100	100.000	ENSMZEG00005027408	sf3b5	100	100.000	Maylandia_zebra
ENSMZEG00005028115	SF3B5	100	87.209	ENSMZEG00005027407	sf3b5	100	87.209	Maylandia_zebra
ENSMZEG00005028115	SF3B5	100	94.186	ENSMGAG00000015849	SF3B5	100	94.186	Meleagris_gallopavo
ENSMZEG00005028115	SF3B5	99	92.941	ENSMAUG00000008283	Sf3b5	99	92.941	Mesocricetus_auratus
ENSMZEG00005028115	SF3B5	99	94.118	ENSMICG00000014922	SF3B5	99	94.118	Microcebus_murinus
ENSMZEG00005028115	SF3B5	99	92.941	ENSMOCG00000001713	Sf3b5	99	92.941	Microtus_ochrogaster
ENSMZEG00005028115	SF3B5	100	97.674	ENSMMOG00000007956	sf3b5	100	97.674	Mola_mola
ENSMZEG00005028115	SF3B5	99	94.118	ENSMODG00000023291	SF3B5	83	94.118	Monodelphis_domestica
ENSMZEG00005028115	SF3B5	91	95.062	ENSMALG00000020357	sf3b5	99	95.062	Monopterus_albus
ENSMZEG00005028115	SF3B5	99	92.941	MGP_CAROLIEiJ_G0015120	Sf3b5	99	92.941	Mus_caroli
ENSMZEG00005028115	SF3B5	99	92.941	ENSMUSG00000078348	Sf3b5	99	92.941	Mus_musculus
ENSMZEG00005028115	SF3B5	99	92.941	MGP_PahariEiJ_G0023739	Sf3b5	99	92.941	Mus_pahari
ENSMZEG00005028115	SF3B5	99	92.941	MGP_SPRETEiJ_G0015928	Sf3b5	99	92.941	Mus_spretus
ENSMZEG00005028115	SF3B5	99	94.118	ENSMPUG00000018379	SF3B5	99	94.118	Mustela_putorius_furo
ENSMZEG00005028115	SF3B5	93	93.750	ENSMLUG00000025546	-	93	93.750	Myotis_lucifugus
ENSMZEG00005028115	SF3B5	99	94.118	ENSMLUG00000028504	-	99	94.118	Myotis_lucifugus
ENSMZEG00005028115	SF3B5	99	91.765	ENSMLUG00000010802	-	99	91.765	Myotis_lucifugus
ENSMZEG00005028115	SF3B5	99	94.118	ENSNGAG00000010732	Sf3b5	99	94.118	Nannospalax_galili
ENSMZEG00005028115	SF3B5	100	100.000	ENSNBRG00000014383	sf3b5	100	100.000	Neolamprologus_brichardi
ENSMZEG00005028115	SF3B5	99	94.118	ENSNLEG00000019307	SF3B5	99	94.118	Nomascus_leucogenys
ENSMZEG00005028115	SF3B5	99	94.118	ENSMEUG00000005440	-	99	94.118	Notamacropus_eugenii
ENSMZEG00005028115	SF3B5	99	94.118	ENSMEUG00000005445	-	99	94.118	Notamacropus_eugenii
ENSMZEG00005028115	SF3B5	99	95.294	ENSOPRG00000015107	SF3B5	99	95.294	Ochotona_princeps
ENSMZEG00005028115	SF3B5	99	94.118	ENSODEG00000019507	SF3B5	99	94.118	Octodon_degus
ENSMZEG00005028115	SF3B5	100	100.000	ENSONIG00000020725	sf3b5	100	100.000	Oreochromis_niloticus
ENSMZEG00005028115	SF3B5	67	94.828	ENSOANG00000015301	SF3B5	95	94.828	Ornithorhynchus_anatinus
ENSMZEG00005028115	SF3B5	99	94.118	ENSOCUG00000008752	SF3B5	99	94.118	Oryctolagus_cuniculus
ENSMZEG00005028115	SF3B5	100	96.512	ENSORLG00000004925	sf3b5	100	96.512	Oryzias_latipes
ENSMZEG00005028115	SF3B5	100	96.512	ENSORLG00020011625	sf3b5	100	96.512	Oryzias_latipes_hni
ENSMZEG00005028115	SF3B5	100	96.512	ENSORLG00015017061	sf3b5	100	96.512	Oryzias_latipes_hsok
ENSMZEG00005028115	SF3B5	100	96.512	ENSOMEG00000010620	sf3b5	100	96.512	Oryzias_melastigma
ENSMZEG00005028115	SF3B5	99	94.118	ENSOGAG00000012152	SF3B5	99	94.118	Otolemur_garnettii
ENSMZEG00005028115	SF3B5	92	94.937	ENSOARG00000019486	-	95	94.937	Ovis_aries
ENSMZEG00005028115	SF3B5	99	90.588	ENSOARG00000002617	SF3B5	99	90.588	Ovis_aries
ENSMZEG00005028115	SF3B5	99	94.118	ENSPPAG00000012940	SF3B5	99	94.118	Pan_paniscus
ENSMZEG00005028115	SF3B5	99	94.118	ENSPPRG00000021262	SF3B5	99	94.118	Panthera_pardus
ENSMZEG00005028115	SF3B5	99	94.118	ENSPTIG00000001952	SF3B5	99	94.118	Panthera_tigris_altaica
ENSMZEG00005028115	SF3B5	99	94.118	ENSPTRG00000018676	SF3B5	99	94.118	Pan_troglodytes
ENSMZEG00005028115	SF3B5	99	94.118	ENSPANG00000034242	SF3B5	99	94.118	Papio_anubis
ENSMZEG00005028115	SF3B5	100	95.349	ENSPKIG00000006057	sf3b5	100	95.349	Paramormyrops_kingsleyae
ENSMZEG00005028115	SF3B5	100	93.023	ENSPSIG00000001262	SF3B5	100	93.023	Pelodiscus_sinensis
ENSMZEG00005028115	SF3B5	100	97.674	ENSPMGG00000014804	sf3b5	100	97.674	Periophthalmus_magnuspinnatus
ENSMZEG00005028115	SF3B5	99	92.941	ENSPEMG00000012931	Sf3b5	99	92.941	Peromyscus_maniculatus_bairdii
ENSMZEG00005028115	SF3B5	100	89.535	ENSPMAG00000010296	sf3b5	100	89.535	Petromyzon_marinus
ENSMZEG00005028115	SF3B5	99	72.941	ENSPCIG00000025007	-	99	72.941	Phascolarctos_cinereus
ENSMZEG00005028115	SF3B5	93	96.250	ENSPCIG00000011344	-	78	96.250	Phascolarctos_cinereus
ENSMZEG00005028115	SF3B5	100	98.837	ENSPFOG00000019994	sf3b5	100	98.837	Poecilia_formosa
ENSMZEG00005028115	SF3B5	100	98.837	ENSPLAG00000008412	sf3b5	100	98.837	Poecilia_latipinna
ENSMZEG00005028115	SF3B5	100	98.837	ENSPMEG00000020050	sf3b5	100	98.837	Poecilia_mexicana
ENSMZEG00005028115	SF3B5	100	98.837	ENSPREG00000009242	sf3b5	100	98.837	Poecilia_reticulata
ENSMZEG00005028115	SF3B5	99	94.118	ENSPPYG00000017068	SF3B5	99	94.118	Pongo_abelii
ENSMZEG00005028115	SF3B5	99	94.118	ENSPCAG00000009332	SF3B5	99	94.118	Procavia_capensis
ENSMZEG00005028115	SF3B5	99	94.118	ENSPCOG00000013754	SF3B5	99	94.118	Propithecus_coquereli
ENSMZEG00005028115	SF3B5	56	95.833	ENSPVAG00000002820	SF3B5	100	95.833	Pteropus_vampyrus
ENSMZEG00005028115	SF3B5	100	100.000	ENSPNYG00000002075	sf3b5	100	100.000	Pundamilia_nyererei
ENSMZEG00005028115	SF3B5	100	95.349	ENSPNAG00000004942	sf3b5	100	95.349	Pygocentrus_nattereri
ENSMZEG00005028115	SF3B5	99	92.941	ENSRNOG00000014908	Sf3b5	99	92.941	Rattus_norvegicus
ENSMZEG00005028115	SF3B5	99	94.118	ENSRBIG00000006301	SF3B5	99	94.118	Rhinopithecus_bieti
ENSMZEG00005028115	SF3B5	99	94.118	ENSRROG00000037067	SF3B5	99	94.118	Rhinopithecus_roxellana
ENSMZEG00005028115	SF3B5	99	94.118	ENSSBOG00000006122	SF3B5	99	94.118	Saimiri_boliviensis_boliviensis
ENSMZEG00005028115	SF3B5	99	92.941	ENSSHAG00000015670	SF3B5	99	92.941	Sarcophilus_harrisii
ENSMZEG00005028115	SF3B5	100	96.512	ENSSFOG00015015767	sf3b5	100	96.512	Scleropages_formosus
ENSMZEG00005028115	SF3B5	100	97.674	ENSSMAG00000018852	sf3b5	100	97.674	Scophthalmus_maximus
ENSMZEG00005028115	SF3B5	100	98.837	ENSSDUG00000018161	sf3b5	100	98.837	Seriola_dumerili
ENSMZEG00005028115	SF3B5	100	98.837	ENSSLDG00000014547	sf3b5	100	98.837	Seriola_lalandi_dorsalis
ENSMZEG00005028115	SF3B5	99	94.118	ENSSARG00000007820	SF3B5	99	94.118	Sorex_araneus
ENSMZEG00005028115	SF3B5	100	97.674	ENSSPAG00000017371	-	100	97.674	Stegastes_partitus
ENSMZEG00005028115	SF3B5	100	97.674	ENSSPAG00000009244	sf3b5	100	97.674	Stegastes_partitus
ENSMZEG00005028115	SF3B5	99	94.118	ENSSSCG00000035578	SF3B5	99	94.118	Sus_scrofa
ENSMZEG00005028115	SF3B5	100	94.186	ENSTGUG00000010810	SF3B5	100	94.186	Taeniopygia_guttata
ENSMZEG00005028115	SF3B5	100	96.512	ENSTRUG00000005577	sf3b5	100	96.512	Takifugu_rubripes
ENSMZEG00005028115	SF3B5	100	96.512	ENSTNIG00000001265	sf3b5	100	96.512	Tetraodon_nigroviridis
ENSMZEG00005028115	SF3B5	99	95.294	ENSTBEG00000003072	SF3B5	99	95.294	Tupaia_belangeri
ENSMZEG00005028115	SF3B5	99	94.118	ENSTTRG00000008817	SF3B5	99	94.118	Tursiops_truncatus
ENSMZEG00005028115	SF3B5	99	94.118	ENSUAMG00000027296	SF3B5	99	94.118	Ursus_americanus
ENSMZEG00005028115	SF3B5	99	94.118	ENSUMAG00000005448	SF3B5	99	94.118	Ursus_maritimus
ENSMZEG00005028115	SF3B5	99	94.118	ENSVPAG00000003826	SF3B5	99	94.118	Vicugna_pacos
ENSMZEG00005028115	SF3B5	99	94.118	ENSVVUG00000004703	SF3B5	99	94.118	Vulpes_vulpes
ENSMZEG00005028115	SF3B5	100	96.512	ENSXETG00000021409	sf3b5	100	96.512	Xenopus_tropicalis
ENSMZEG00005028115	SF3B5	100	98.837	ENSXMAG00000019971	sf3b5	100	98.837	Xiphophorus_maculatus