EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005028346 (Gene tree)
Gene ID: 101476480
Gene Symbol: nob1
Alias: fc27e05|si:ch73-167i17.3|wu:fc27e05
Full Name: NIN1 (RPN12) binding protein 1 homolog
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Plus strand
Length: 6368 bases
Position: chrAGTA05000409.1:118363-124730
Accession: 101476480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005037922	NOB1_Zn_bind	PF08772.11	8.6e-31	1	1
ENSMZEP00005037920	NOB1_Zn_bind	PF08772.11	1.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005039319	-	1191	XM_014407966	ENSMZEP00005037922	396 (aa)	XP_014263452	-
ENSMZET00005039317	-	2500	XM_014407945	ENSMZEP00005037920	480 (aa)	XP_014263431	UPI000D2FAD57

Gene Model

Click here to download ENSMZEG00005028346's gene model file

Pathways

Pathway ID	Pathway Name	Source
mze03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005028346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005028346	nob1	99	64.059	ENSG00000141101	NOB1	92	73.770	Homo_sapiens
ENSMZEG00005028346	nob1	100	70.197	ENSAPOG00000008241	nob1	100	70.762	Acanthochromis_polyacanthus
ENSMZEG00005028346	nob1	99	64.578	ENSAMEG00000006706	NOB1	98	64.578	Ailuropoda_melanoleuca
ENSMZEG00005028346	nob1	99	80.048	ENSACIG00000001503	nob1	100	81.731	Amphilophus_citrinellus
ENSMZEG00005028346	nob1	100	82.663	ENSAOCG00000006533	nob1	100	82.161	Amphiprion_ocellaris
ENSMZEG00005028346	nob1	100	81.000	ENSAPEG00000000032	-	100	80.846	Amphiprion_percula
ENSMZEG00005028346	nob1	100	81.250	ENSAPEG00000000029	nob1	100	81.095	Amphiprion_percula
ENSMZEG00005028346	nob1	100	79.602	ENSATEG00000014585	nob1	100	79.104	Anabas_testudineus
ENSMZEG00005028346	nob1	99	62.110	ENSACAG00000003697	NOB1	87	63.070	Anolis_carolinensis
ENSMZEG00005028346	nob1	99	63.570	ENSANAG00000036611	NOB1	99	63.325	Aotus_nancymaae
ENSMZEG00005028346	nob1	100	99.167	ENSACLG00000024897	nob1	100	99.167	Astatotilapia_calliptera
ENSMZEG00005028346	nob1	94	64.085	ENSAMXG00000003642	nob1	100	64.554	Astyanax_mexicanus
ENSMZEG00005028346	nob1	99	64.878	ENSBTAG00000020633	NOB1	99	65.122	Bos_taurus
ENSMZEG00005028346	nob1	97	33.247	WBGene00021843	Y54E10BR.4	97	33.247	Caenorhabditis_elegans
ENSMZEG00005028346	nob1	99	63.814	ENSCJAG00000015230	NOB1	99	63.570	Callithrix_jacchus
ENSMZEG00005028346	nob1	99	64.964	ENSCAFG00000020251	NOB1	99	65.207	Canis_familiaris
ENSMZEG00005028346	nob1	99	64.964	ENSCAFG00020020297	NOB1	99	65.207	Canis_lupus_dingo
ENSMZEG00005028346	nob1	99	66.667	ENSCHIG00000027022	NOB1	99	66.751	Capra_hircus
ENSMZEG00005028346	nob1	99	64.548	ENSTSYG00000003084	NOB1	99	65.037	Carlito_syrichta
ENSMZEG00005028346	nob1	83	61.808	ENSCAPG00000015542	NOB1	100	60.933	Cavia_aperea
ENSMZEG00005028346	nob1	99	63.547	ENSCPOG00000022538	NOB1	99	62.808	Cavia_porcellus
ENSMZEG00005028346	nob1	99	63.592	ENSCCAG00000023773	NOB1	99	63.350	Cebus_capucinus
ENSMZEG00005028346	nob1	99	63.814	ENSCATG00000039487	NOB1	99	64.059	Cercocebus_atys
ENSMZEG00005028346	nob1	83	64.095	ENSCLAG00000005926	NOB1	100	64.095	Chinchilla_lanigera
ENSMZEG00005028346	nob1	99	63.814	ENSCSAG00000004158	NOB1	99	64.059	Chlorocebus_sabaeus
ENSMZEG00005028346	nob1	99	58.924	ENSCHOG00000011047	NOB1	99	58.680	Choloepus_hoffmanni
ENSMZEG00005028346	nob1	99	62.648	ENSCPBG00000027035	NOB1	92	62.411	Chrysemys_picta_bellii
ENSMZEG00005028346	nob1	99	47.750	ENSCING00000023441	-	100	47.619	Ciona_intestinalis
ENSMZEG00005028346	nob1	100	44.068	ENSCSAVG00000009081	-	100	43.826	Ciona_savignyi
ENSMZEG00005028346	nob1	99	66.416	ENSCGRG00001009255	Nob1	94	66.416	Cricetulus_griseus_chok1gshd
ENSMZEG00005028346	nob1	99	66.416	ENSCGRG00000010869	Nob1	99	66.416	Cricetulus_griseus_crigri
ENSMZEG00005028346	nob1	90	68.622	ENSCSEG00000019657	nob1	96	68.622	Cynoglossus_semilaevis
ENSMZEG00005028346	nob1	99	64.318	ENSDARG00000016080	nob1	100	65.909	Danio_rerio
ENSMZEG00005028346	nob1	99	65.196	ENSDNOG00000041643	NOB1	99	65.526	Dasypus_novemcinctus
ENSMZEG00005028346	nob1	99	64.128	ENSDORG00000000483	Nob1	99	63.704	Dipodomys_ordii
ENSMZEG00005028346	nob1	97	37.029	FBgn0030177	CG2972	98	36.250	Drosophila_melanogaster
ENSMZEG00005028346	nob1	58	52.083	ENSETEG00000000011	-	59	54.008	Echinops_telfairi
ENSMZEG00005028346	nob1	99	46.565	ENSEBUG00000004464	nob1	98	47.074	Eptatretus_burgeri
ENSMZEG00005028346	nob1	99	64.165	ENSEASG00005021356	NOB1	83	64.407	Equus_asinus_asinus
ENSMZEG00005028346	nob1	99	64.165	ENSECAG00000023748	NOB1	80	64.407	Equus_caballus
ENSMZEG00005028346	nob1	66	52.708	ENSEEUG00000014384	NOB1	66	50.357	Erinaceus_europaeus
ENSMZEG00005028346	nob1	100	67.793	ENSELUG00000016199	nob1	100	65.455	Esox_lucius
ENSMZEG00005028346	nob1	99	65.854	ENSFCAG00000002958	NOB1	99	65.366	Felis_catus
ENSMZEG00005028346	nob1	52	67.593	ENSFALG00000002747	NOB1	100	58.491	Ficedula_albicollis
ENSMZEG00005028346	nob1	99	63.704	ENSFDAG00000009239	NOB1	99	62.716	Fukomys_damarensis
ENSMZEG00005028346	nob1	61	69.318	ENSFHEG00000007657	nob1	67	72.119	Fundulus_heteroclitus
ENSMZEG00005028346	nob1	99	76.382	ENSGMOG00000010638	nob1	99	76.382	Gadus_morhua
ENSMZEG00005028346	nob1	99	55.556	ENSGALG00000000693	NOB1	99	57.210	Gallus_gallus
ENSMZEG00005028346	nob1	100	66.042	ENSGAFG00000006104	nob1	100	66.528	Gambusia_affinis
ENSMZEG00005028346	nob1	99	77.340	ENSGACG00000017552	nob1	99	77.696	Gasterosteus_aculeatus
ENSMZEG00005028346	nob1	99	62.500	ENSGAGG00000003902	NOB1	99	62.264	Gopherus_agassizii
ENSMZEG00005028346	nob1	99	64.548	ENSGGOG00000025456	NOB1	99	64.792	Gorilla_gorilla
ENSMZEG00005028346	nob1	100	96.069	ENSHBUG00000002580	nob1	100	96.069	Haplochromis_burtoni
ENSMZEG00005028346	nob1	99	63.747	ENSHGLG00000014260	NOB1	99	62.530	Heterocephalus_glaber_female
ENSMZEG00005028346	nob1	99	63.793	ENSHGLG00100013978	NOB1	99	63.793	Heterocephalus_glaber_male
ENSMZEG00005028346	nob1	99	65.083	ENSHCOG00000006699	nob1	100	65.796	Hippocampus_comes
ENSMZEG00005028346	nob1	100	63.580	ENSIPUG00000007579	nob1	100	63.580	Ictalurus_punctatus
ENSMZEG00005028346	nob1	99	65.423	ENSSTOG00000001204	NOB1	99	65.423	Ictidomys_tridecemlineatus
ENSMZEG00005028346	nob1	99	63.547	ENSJJAG00000015543	Nob1	99	63.547	Jaculus_jaculus
ENSMZEG00005028346	nob1	100	76.442	ENSKMAG00000018220	nob1	100	75.721	Kryptolebias_marmoratus
ENSMZEG00005028346	nob1	100	80.893	ENSLBEG00000026375	nob1	100	80.397	Labrus_bergylta
ENSMZEG00005028346	nob1	100	62.100	ENSLACG00000006973	NOB1	98	63.014	Latimeria_chalumnae
ENSMZEG00005028346	nob1	100	63.393	ENSLOCG00000001411	nob1	99	63.393	Lepisosteus_oculatus
ENSMZEG00005028346	nob1	99	65.291	ENSLAFG00000008978	NOB1	99	64.563	Loxodonta_africana
ENSMZEG00005028346	nob1	99	64.059	ENSMFAG00000030131	NOB1	99	63.480	Macaca_fascicularis
ENSMZEG00005028346	nob1	99	64.303	ENSMMUG00000006506	NOB1	99	64.303	Macaca_mulatta
ENSMZEG00005028346	nob1	99	64.303	ENSMNEG00000028829	NOB1	99	58.924	Macaca_nemestrina
ENSMZEG00005028346	nob1	99	64.303	ENSMLEG00000032913	NOB1	99	64.548	Mandrillus_leucophaeus
ENSMZEG00005028346	nob1	63	98.675	ENSMZEG00005003827	-	92	98.675	Maylandia_zebra
ENSMZEG00005028346	nob1	63	63.670	ENSMGAG00000008675	NOB1	98	63.774	Meleagris_gallopavo
ENSMZEG00005028346	nob1	99	63.500	ENSMAUG00000013554	Nob1	99	63.750	Mesocricetus_auratus
ENSMZEG00005028346	nob1	99	63.415	ENSMICG00000012123	NOB1	99	63.659	Microcebus_murinus
ENSMZEG00005028346	nob1	99	66.418	ENSMOCG00000010370	Nob1	99	66.667	Microtus_ochrogaster
ENSMZEG00005028346	nob1	100	77.317	ENSMMOG00000002120	nob1	100	76.513	Mola_mola
ENSMZEG00005028346	nob1	99	62.175	ENSMODG00000002677	NOB1	99	61.429	Monodelphis_domestica
ENSMZEG00005028346	nob1	99	80.253	ENSMALG00000014580	nob1	100	79.950	Monopterus_albus
ENSMZEG00005028346	nob1	99	65.672	MGP_CAROLIEiJ_G0031536	Nob1	97	65.672	Mus_caroli
ENSMZEG00005028346	nob1	99	66.250	ENSMUSG00000003848	Nob1	99	66.250	Mus_musculus
ENSMZEG00005028346	nob1	99	64.938	MGP_PahariEiJ_G0023136	Nob1	99	64.938	Mus_pahari
ENSMZEG00005028346	nob1	99	65.679	MGP_SPRETEiJ_G0032654	Nob1	97	65.679	Mus_spretus
ENSMZEG00005028346	nob1	99	64.423	ENSMPUG00000007483	NOB1	91	64.649	Mustela_putorius_furo
ENSMZEG00005028346	nob1	99	65.111	ENSMLUG00000006667	NOB1	99	64.128	Myotis_lucifugus
ENSMZEG00005028346	nob1	99	66.915	ENSNGAG00000008627	Nob1	99	66.915	Nannospalax_galili
ENSMZEG00005028346	nob1	99	64.303	ENSNLEG00000005572	NOB1	99	64.548	Nomascus_leucogenys
ENSMZEG00005028346	nob1	76	63.043	ENSOPRG00000006721	NOB1	99	63.354	Ochotona_princeps
ENSMZEG00005028346	nob1	99	64.912	ENSODEG00000014376	NOB1	99	64.912	Octodon_degus
ENSMZEG00005028346	nob1	99	82.579	ENSONIG00000003319	nob1	100	84.969	Oreochromis_niloticus
ENSMZEG00005028346	nob1	83	63.218	ENSOCUG00000004400	NOB1	100	63.793	Oryctolagus_cuniculus
ENSMZEG00005028346	nob1	100	75.682	ENSORLG00000018862	nob1	100	75.245	Oryzias_latipes
ENSMZEG00005028346	nob1	100	76.675	ENSORLG00020014687	nob1	100	75.490	Oryzias_latipes_hni
ENSMZEG00005028346	nob1	100	75.312	ENSORLG00015012156	nob1	100	74.572	Oryzias_latipes_hsok
ENSMZEG00005028346	nob1	100	70.686	ENSOMEG00000022722	nob1	100	71.726	Oryzias_melastigma
ENSMZEG00005028346	nob1	99	59.756	ENSOGAG00000004590	NOB1	99	58.780	Otolemur_garnettii
ENSMZEG00005028346	nob1	99	65.281	ENSOARG00000003606	NOB1	99	65.281	Ovis_aries
ENSMZEG00005028346	nob1	99	64.059	ENSPPAG00000040257	NOB1	99	64.303	Pan_paniscus
ENSMZEG00005028346	nob1	97	59.591	ENSPPAG00000003317	-	100	59.335	Pan_paniscus
ENSMZEG00005028346	nob1	99	63.095	ENSPPRG00000016949	NOB1	99	64.964	Panthera_pardus
ENSMZEG00005028346	nob1	99	63.095	ENSPTIG00000011234	NOB1	99	64.964	Panthera_tigris_altaica
ENSMZEG00005028346	nob1	99	64.059	ENSPTRG00000008285	NOB1	99	64.303	Pan_troglodytes
ENSMZEG00005028346	nob1	99	64.792	ENSPANG00000015858	NOB1	99	64.548	Papio_anubis
ENSMZEG00005028346	nob1	100	70.952	ENSPKIG00000020293	nob1	100	70.476	Paramormyrops_kingsleyae
ENSMZEG00005028346	nob1	99	59.529	ENSPSIG00000012477	NOB1	100	60.440	Pelodiscus_sinensis
ENSMZEG00005028346	nob1	99	72.658	ENSPMGG00000023476	nob1	100	74.177	Periophthalmus_magnuspinnatus
ENSMZEG00005028346	nob1	99	65.347	ENSPEMG00000010995	Nob1	99	65.347	Peromyscus_maniculatus_bairdii
ENSMZEG00005028346	nob1	52	72.059	ENSPCIG00000007274	-	99	61.742	Phascolarctos_cinereus
ENSMZEG00005028346	nob1	83	67.590	ENSPFOG00000000027	nob1	100	68.144	Poecilia_formosa
ENSMZEG00005028346	nob1	67	69.565	ENSPLAG00000011546	nob1	100	67.427	Poecilia_latipinna
ENSMZEG00005028346	nob1	100	70.244	ENSPMEG00000023435	nob1	100	69.927	Poecilia_mexicana
ENSMZEG00005028346	nob1	99	67.292	ENSPREG00000007675	nob1	100	67.562	Poecilia_reticulata
ENSMZEG00005028346	nob1	99	65.526	ENSPPYG00000007509	NOB1	99	65.931	Pongo_abelii
ENSMZEG00005028346	nob1	99	60.775	ENSPCAG00000001527	NOB1	99	60.291	Procavia_capensis
ENSMZEG00005028346	nob1	99	65.271	ENSPCOG00000025515	NOB1	99	65.271	Propithecus_coquereli
ENSMZEG00005028346	nob1	77	44.410	ENSPVAG00000013330	NOB1	78	44.410	Pteropus_vampyrus
ENSMZEG00005028346	nob1	100	98.125	ENSPNYG00000018449	nob1	100	98.125	Pundamilia_nyererei
ENSMZEG00005028346	nob1	100	62.921	ENSPNAG00000004244	nob1	99	64.612	Pygocentrus_nattereri
ENSMZEG00005028346	nob1	99	65.111	ENSRNOG00000021890	Nob1	99	65.111	Rattus_norvegicus
ENSMZEG00005028346	nob1	99	63.814	ENSRBIG00000019599	NOB1	99	64.303	Rhinopithecus_bieti
ENSMZEG00005028346	nob1	99	63.814	ENSRROG00000033419	NOB1	99	64.303	Rhinopithecus_roxellana
ENSMZEG00005028346	nob1	83	62.248	ENSSBOG00000029042	NOB1	89	61.960	Saimiri_boliviensis_boliviensis
ENSMZEG00005028346	nob1	99	64.423	ENSSHAG00000015387	NOB1	99	65.144	Sarcophilus_harrisii
ENSMZEG00005028346	nob1	100	67.898	ENSSFOG00015008503	nob1	100	69.053	Scleropages_formosus
ENSMZEG00005028346	nob1	100	79.327	ENSSMAG00000003064	nob1	100	81.752	Scophthalmus_maximus
ENSMZEG00005028346	nob1	100	80.193	ENSSDUG00000007307	nob1	100	81.159	Seriola_dumerili
ENSMZEG00005028346	nob1	72	90.751	ENSSLDG00000011459	-	97	90.751	Seriola_lalandi_dorsalis
ENSMZEG00005028346	nob1	87	59.673	ENSSPUG00000005621	NOB1	99	60.920	Sphenodon_punctatus
ENSMZEG00005028346	nob1	100	79.950	ENSSPAG00000022362	nob1	100	80.590	Stegastes_partitus
ENSMZEG00005028346	nob1	99	64.634	ENSSSCG00000002753	NOB1	99	64.634	Sus_scrofa
ENSMZEG00005028346	nob1	52	67.907	ENSTGUG00000008124	NOB1	93	67.757	Taeniopygia_guttata
ENSMZEG00005028346	nob1	99	74.828	ENSTRUG00000004780	nob1	100	74.600	Takifugu_rubripes
ENSMZEG00005028346	nob1	99	74.828	ENSTRUG00000023145	nob1	100	74.600	Takifugu_rubripes
ENSMZEG00005028346	nob1	99	75.240	ENSTNIG00000002552	nob1	100	74.760	Tetraodon_nigroviridis
ENSMZEG00005028346	nob1	58	56.680	ENSTBEG00000000690	NOB1	52	55.466	Tupaia_belangeri
ENSMZEG00005028346	nob1	61	61.364	ENSUAMG00000028135	NOB1	99	64.706	Ursus_americanus
ENSMZEG00005028346	nob1	99	62.559	ENSUMAG00000018658	NOB1	95	64.649	Ursus_maritimus
ENSMZEG00005028346	nob1	99	64.477	ENSVVUG00000017271	NOB1	99	64.720	Vulpes_vulpes
ENSMZEG00005028346	nob1	100	63.448	ENSXETG00000017874	nob1	99	62.989	Xenopus_tropicalis
ENSMZEG00005028346	nob1	83	70.746	ENSXCOG00000009734	nob1	100	71.642	Xiphophorus_couchianus
ENSMZEG00005028346	nob1	100	67.064	ENSXMAG00000017371	nob1	100	68.434	Xiphophorus_maculatus