EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMZEG00005028537 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4.1
Gene Type: protein_coding
Species: Maylandia_zebra
Status: putative
Strand: Minus strand
Length: 1170 bases
Position: chrAGTA05000459.1:63592-64761
Accession: 101471146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMZEP00005038158	RRM_5	PF13893.6	1.2e-07	1	1
ENSMZEP00005038158	RRM_1	PF00076.22	4.9e-27	1	2
ENSMZEP00005038158	RRM_1	PF00076.22	4.9e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMZET00005039567	-	987	XM_004567111	ENSMZEP00005038158	328 (aa)	XP_004567168	-

Gene Model

Click here to download ENSMZEG00005028537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMZEG00005028537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMZEG00005028537	-	85	82.508	ENSAPOG00000002953	rbm4.3	85	83.446	Acanthochromis_polyacanthus
ENSMZEG00005028537	-	83	65.203	ENSAPOG00000002991	rbm4.3	84	63.176	Acanthochromis_polyacanthus
ENSMZEG00005028537	-	85	89.404	ENSACIG00000021311	-	89	89.404	Amphilophus_citrinellus
ENSMZEG00005028537	-	81	64.483	ENSACIG00000021295	rbm4.3	84	63.514	Amphilophus_citrinellus
ENSMZEG00005028537	-	83	65.541	ENSAOCG00000007992	rbm4.3	84	63.851	Amphiprion_ocellaris
ENSMZEG00005028537	-	85	81.126	ENSAOCG00000008015	rbm4.3	85	81.695	Amphiprion_ocellaris
ENSMZEG00005028537	-	83	65.541	ENSAPEG00000017288	rbm4.3	84	63.851	Amphiprion_percula
ENSMZEG00005028537	-	85	82.450	ENSAPEG00000017324	rbm4.3	85	81.356	Amphiprion_percula
ENSMZEG00005028537	-	85	81.788	ENSATEG00000019375	rbm4.3	85	82.034	Anabas_testudineus
ENSMZEG00005028537	-	85	66.007	ENSATEG00000019395	rbm4.3	85	64.189	Anabas_testudineus
ENSMZEG00005028537	-	85	91.060	ENSACLG00000010620	-	89	91.060	Astatotilapia_calliptera
ENSMZEG00005028537	-	83	64.527	ENSACLG00000010642	rbm4.3	83	62.500	Astatotilapia_calliptera
ENSMZEG00005028537	-	57	68.599	ENSAMXG00000040224	rbm4.3	82	68.500	Astyanax_mexicanus
ENSMZEG00005028537	-	85	74.426	ENSCSEG00000013659	rbm4.3	85	74.832	Cynoglossus_semilaevis
ENSMZEG00005028537	-	81	59.589	ENSCVAG00000008502	rbm4.3	85	59.396	Cyprinodon_variegatus
ENSMZEG00005028537	-	83	73.490	ENSCVAG00000008508	rbm4.3	87	73.826	Cyprinodon_variegatus
ENSMZEG00005028537	-	83	69.595	ENSDARG00000022129	rbm4.3	84	65.986	Danio_rerio
ENSMZEG00005028537	-	81	68.814	ENSELUG00000022155	rbm4.3	85	67.893	Esox_lucius
ENSMZEG00005028537	-	81	67.347	ENSELUG00000022150	rbm4.3	85	63.973	Esox_lucius
ENSMZEG00005028537	-	77	63.571	ENSELUG00000022168	rbm4.3	85	62.876	Esox_lucius
ENSMZEG00005028537	-	78	73.477	ENSFHEG00000023137	rbm4.3	84	74.444	Fundulus_heteroclitus
ENSMZEG00005028537	-	85	67.081	ENSGACG00000019980	rbm4.3	82	61.149	Gasterosteus_aculeatus
ENSMZEG00005028537	-	85	91.060	ENSHBUG00000009020	-	89	91.060	Haplochromis_burtoni
ENSMZEG00005028537	-	83	64.865	ENSHBUG00000009051	rbm4.3	83	62.838	Haplochromis_burtoni
ENSMZEG00005028537	-	85	68.543	ENSHCOG00000010349	rbm4.3	84	68.814	Hippocampus_comes
ENSMZEG00005028537	-	58	75.000	ENSHCOG00000010363	rbm4.3	82	57.143	Hippocampus_comes
ENSMZEG00005028537	-	83	64.846	ENSIPUG00000022943	RBM4B	84	65.870	Ictalurus_punctatus
ENSMZEG00005028537	-	83	69.128	ENSKMAG00000017468	rbm4.3	87	67.785	Kryptolebias_marmoratus
ENSMZEG00005028537	-	85	77.888	ENSLBEG00000001071	-	85	79.054	Labrus_bergylta
ENSMZEG00005028537	-	85	56.535	ENSLOCG00000002755	rbm4.3	85	57.632	Lepisosteus_oculatus
ENSMZEG00005028537	-	85	64.901	ENSMAMG00000004701	rbm4.3	84	63.729	Mastacembelus_armatus
ENSMZEG00005028537	-	85	80.464	ENSMAMG00000004715	-	71	81.017	Mastacembelus_armatus
ENSMZEG00005028537	-	82	85.666	ENSMZEG00005007417	-	87	86.102	Maylandia_zebra
ENSMZEG00005028537	-	83	64.527	ENSMZEG00005028540	rbm4.3	83	62.500	Maylandia_zebra
ENSMZEG00005028537	-	91	60.479	ENSMZEG00005007441	rbm4.3	95	57.143	Maylandia_zebra
ENSMZEG00005028537	-	81	60.825	ENSMMOG00000012191	rbm4.3	84	60.943	Mola_mola
ENSMZEG00005028537	-	85	63.245	ENSMALG00000015014	-	84	59.661	Monopterus_albus
ENSMZEG00005028537	-	97	78.006	ENSMALG00000003001	rbm4.3	99	78.006	Monopterus_albus
ENSMZEG00005028537	-	89	60.568	ENSMALG00000003032	rbm4.3	88	59.661	Monopterus_albus
ENSMZEG00005028537	-	83	64.189	ENSNBRG00000012372	rbm4.3	84	61.824	Neolamprologus_brichardi
ENSMZEG00005028537	-	85	91.060	ENSONIG00000018380	-	89	91.060	Oreochromis_niloticus
ENSMZEG00005028537	-	83	64.865	ENSONIG00000018378	rbm4.3	83	62.838	Oreochromis_niloticus
ENSMZEG00005028537	-	85	55.229	ENSORLG00000024749	rbm4.3	77	52.453	Oryzias_latipes
ENSMZEG00005028537	-	85	68.910	ENSORLG00000012473	rbm4.3	87	69.180	Oryzias_latipes
ENSMZEG00005028537	-	85	71.795	ENSORLG00000011589	rbm4.3	87	72.131	Oryzias_latipes
ENSMZEG00005028537	-	85	55.556	ENSORLG00020012482	rbm4.3	77	52.830	Oryzias_latipes_hni
ENSMZEG00005028537	-	85	68.910	ENSORLG00020012464	rbm4.3	87	69.180	Oryzias_latipes_hni
ENSMZEG00005028537	-	85	71.474	ENSORLG00020012474	rbm4.3	87	71.475	Oryzias_latipes_hni
ENSMZEG00005028537	-	85	71.795	ENSORLG00015013698	rbm4.3	87	71.803	Oryzias_latipes_hsok
ENSMZEG00005028537	-	85	68.590	ENSORLG00015013686	rbm4.3	87	68.852	Oryzias_latipes_hsok
ENSMZEG00005028537	-	85	55.882	ENSORLG00015013721	rbm4.3	77	52.830	Oryzias_latipes_hsok
ENSMZEG00005028537	-	85	69.968	ENSOMEG00000005918	rbm4.3	87	70.261	Oryzias_melastigma
ENSMZEG00005028537	-	85	70.607	ENSOMEG00000005929	rbm4.3	87	70.915	Oryzias_melastigma
ENSMZEG00005028537	-	84	64.474	ENSPKIG00000007001	rbm4.3	64	84.559	Paramormyrops_kingsleyae
ENSMZEG00005028537	-	81	58.249	ENSPLAG00000006077	rbm4.3	85	56.478	Poecilia_latipinna
ENSMZEG00005028537	-	83	70.470	ENSPLAG00000006131	rbm4.3	85	70.470	Poecilia_latipinna
ENSMZEG00005028537	-	81	58.644	ENSPMEG00000024260	rbm4.3	85	56.333	Poecilia_mexicana
ENSMZEG00005028537	-	83	74.161	ENSPMEG00000024263	rbm4.3	87	74.161	Poecilia_mexicana
ENSMZEG00005028537	-	83	70.470	ENSPMEG00000024271	rbm4.3	85	70.470	Poecilia_mexicana
ENSMZEG00005028537	-	83	66.102	ENSPREG00000002156	rbm4.3	90	65.894	Poecilia_reticulata
ENSMZEG00005028537	-	81	58.804	ENSPREG00000002093	-	85	56.667	Poecilia_reticulata
ENSMZEG00005028537	-	83	64.527	ENSPNYG00000018564	rbm4.3	83	62.838	Pundamilia_nyererei
ENSMZEG00005028537	-	85	91.060	ENSPNYG00000018541	rbm4.3	89	91.060	Pundamilia_nyererei
ENSMZEG00005028537	-	83	65.789	ENSPNAG00000013053	rbm4.3	85	65.781	Pygocentrus_nattereri
ENSMZEG00005028537	-	84	61.146	ENSSFOG00015015563	rbm4.3	85	61.364	Scleropages_formosus
ENSMZEG00005028537	-	85	60.201	ENSSMAG00000013653	rbm4.3	84	57.288	Scophthalmus_maximus
ENSMZEG00005028537	-	85	79.139	ENSSMAG00000013644	rbm4.3	85	77.288	Scophthalmus_maximus
ENSMZEG00005028537	-	85	80.795	ENSSDUG00000018435	rbm4.3	85	81.356	Seriola_dumerili
ENSMZEG00005028537	-	85	64.686	ENSSDUG00000018422	rbm4.3	84	60.473	Seriola_dumerili
ENSMZEG00005028537	-	85	64.026	ENSSLDG00000017182	rbm4.3	84	59.797	Seriola_lalandi_dorsalis
ENSMZEG00005028537	-	85	80.795	ENSSLDG00000017204	rbm4.3	85	81.356	Seriola_lalandi_dorsalis
ENSMZEG00005028537	-	85	82.119	ENSSPAG00000008062	rbm4.3	85	82.712	Stegastes_partitus
ENSMZEG00005028537	-	83	65.203	ENSSPAG00000008041	rbm4.3	72	60.473	Stegastes_partitus
ENSMZEG00005028537	-	85	60.000	ENSTRUG00000023874	rbm4.3	84	61.953	Takifugu_rubripes
ENSMZEG00005028537	-	83	79.461	ENSTRUG00000020901	rbm4.3	85	79.125	Takifugu_rubripes
ENSMZEG00005028537	-	82	80.952	ENSTNIG00000005668	rbm4.3	87	80.612	Tetraodon_nigroviridis
ENSMZEG00005028537	-	81	59.322	ENSXCOG00000005996	rbm4.3	84	58.054	Xiphophorus_couchianus
ENSMZEG00005028537	-	83	72.819	ENSXCOG00000006001	rbm4.3	87	72.819	Xiphophorus_couchianus
ENSMZEG00005028537	-	83	70.470	ENSXMAG00000011698	rbm4.3	85	70.805	Xiphophorus_maculatus
ENSMZEG00005028537	-	81	59.259	ENSXMAG00000025173	rbm4.3	85	57.333	Xiphophorus_maculatus
ENSMZEG00005028537	-	83	72.819	ENSXMAG00000021997	rbm4.3	87	72.819	Xiphophorus_maculatus