EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000112 (Gene tree)
Gene ID: 102783584
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L4-A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1790 bases
Position: chrAFNY01108763.1:61-1850
Accession: 102783584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000117	Ribosomal_L4	PF00573.22	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000143	-	783	XM_006810404	ENSNBRP00000000117	260 (aa)	XP_006810467	-

Gene Model

Click here to download ENSNBRG00000000112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000112	-	95	100.000	ENSNBRG00000015986	rpl4	90	99.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000112	-	78	87.192	ENSG00000174444	RPL4	61	87.192	Homo_sapiens
ENSNBRG00000000112	-	82	95.755	ENSAPOG00000008471	rpl4	63	91.453	Acanthochromis_polyacanthus
ENSNBRG00000000112	-	88	89.610	ENSACIG00000003731	rpl4	62	92.641	Amphilophus_citrinellus
ENSNBRG00000000112	-	82	95.755	ENSAOCG00000022562	rpl4	63	91.453	Amphiprion_ocellaris
ENSNBRG00000000112	-	82	95.755	ENSAPEG00000020765	rpl4	63	91.453	Amphiprion_percula
ENSNBRG00000000112	-	80	94.686	ENSATEG00000009670	rpl4	62	93.450	Anabas_testudineus
ENSNBRG00000000112	-	78	87.685	ENSAPLG00000015853	-	68	87.685	Anas_platyrhynchos
ENSNBRG00000000112	-	78	83.251	ENSANAG00000002807	-	51	83.251	Aotus_nancymaae
ENSNBRG00000000112	-	88	100.000	ENSACLG00000015376	rpl4	62	100.000	Astatotilapia_calliptera
ENSNBRG00000000112	-	83	86.977	ENSAMXG00000029678	rpl4	56	86.792	Astyanax_mexicanus
ENSNBRG00000000112	-	82	84.507	ENSBTAG00000005211	RPL4	55	84.834	Bos_taurus
ENSNBRG00000000112	-	76	54.545	WBGene00004415	rpl-4	57	54.040	Caenorhabditis_elegans
ENSNBRG00000000112	-	78	86.207	ENSCJAG00000023126	-	54	86.207	Callithrix_jacchus
ENSNBRG00000000112	-	87	80.435	ENSCAFG00000017309	RPL4	51	85.308	Canis_familiaris
ENSNBRG00000000112	-	87	80.000	ENSCAFG00000011417	-	50	84.834	Canis_familiaris
ENSNBRG00000000112	-	81	85.308	ENSCAFG00000010555	-	50	85.308	Canis_familiaris
ENSNBRG00000000112	-	87	75.758	ENSCAFG00020010362	-	52	82.353	Canis_lupus_dingo
ENSNBRG00000000112	-	87	80.000	ENSCAFG00020012827	-	50	84.834	Canis_lupus_dingo
ENSNBRG00000000112	-	82	82.160	ENSCHIG00000011248	-	52	82.464	Capra_hircus
ENSNBRG00000000112	-	85	71.041	ENSCHIG00000000266	-	52	74.257	Capra_hircus
ENSNBRG00000000112	-	82	80.282	ENSCHIG00000018671	-	52	80.569	Capra_hircus
ENSNBRG00000000112	-	78	75.248	ENSCHIG00000024016	-	52	75.248	Capra_hircus
ENSNBRG00000000112	-	85	81.364	ENSCAPG00000014353	RPL4	51	86.207	Cavia_aperea
ENSNBRG00000000112	-	84	72.146	ENSCATG00000035020	-	67	72.146	Cercocebus_atys
ENSNBRG00000000112	-	77	83.085	ENSCATG00000033739	-	63	83.085	Cercocebus_atys
ENSNBRG00000000112	-	83	85.648	ENSCPBG00000014091	RPL4	58	87.143	Chrysemys_picta_bellii
ENSNBRG00000000112	-	77	67.164	ENSCING00000008014	-	75	64.762	Ciona_intestinalis
ENSNBRG00000000112	-	82	65.566	ENSCSAVG00000002010	-	63	68.902	Ciona_savignyi
ENSNBRG00000000112	-	78	77.833	ENSCANG00000038725	-	51	76.847	Colobus_angolensis_palliatus
ENSNBRG00000000112	-	77	76.617	ENSCANG00000040945	-	50	76.617	Colobus_angolensis_palliatus
ENSNBRG00000000112	-	78	87.192	ENSCANG00000040740	-	51	87.192	Colobus_angolensis_palliatus
ENSNBRG00000000112	-	78	75.862	ENSCGRG00001021316	-	51	75.862	Cricetulus_griseus_chok1gshd
ENSNBRG00000000112	-	78	85.644	ENSCGRG00000002190	-	50	85.644	Cricetulus_griseus_crigri
ENSNBRG00000000112	-	80	91.304	ENSCSEG00000006912	rpl4	62	89.083	Cynoglossus_semilaevis
ENSNBRG00000000112	-	82	93.396	ENSCVAG00000006005	rpl4	62	90.393	Cyprinodon_variegatus
ENSNBRG00000000112	-	80	82.126	ENSDARG00000041182	rpl4	57	82.547	Danio_rerio
ENSNBRG00000000112	-	64	65.868	ENSDNOG00000038463	-	74	65.868	Dasypus_novemcinctus
ENSNBRG00000000112	-	86	62.332	ENSDORG00000023527	-	63	62.332	Dipodomys_ordii
ENSNBRG00000000112	-	75	84.536	ENSDORG00000029479	-	57	79.147	Dipodomys_ordii
ENSNBRG00000000112	-	83	58.525	FBgn0003279	RpL4	53	59.434	Drosophila_melanogaster
ENSNBRG00000000112	-	77	74.129	ENSEBUG00000006663	rpl4	59	74.129	Eptatretus_burgeri
ENSNBRG00000000112	-	80	93.720	ENSELUG00000002885	rpl4	57	93.868	Esox_lucius
ENSNBRG00000000112	-	82	84.977	ENSFCAG00000012293	RPL4	50	85.308	Felis_catus
ENSNBRG00000000112	-	78	88.670	ENSFALG00000012799	RPL4	59	80.952	Ficedula_albicollis
ENSNBRG00000000112	-	82	94.340	ENSFHEG00000005347	rpl4	62	91.266	Fundulus_heteroclitus
ENSNBRG00000000112	-	85	89.140	ENSGMOG00000008359	rpl4	59	89.151	Gadus_morhua
ENSNBRG00000000112	-	78	87.685	ENSGALG00000007711	RPL4	52	87.685	Gallus_gallus
ENSNBRG00000000112	-	82	93.396	ENSGAFG00000020724	rpl4	62	90.393	Gambusia_affinis
ENSNBRG00000000112	-	80	91.787	ENSGACG00000004968	rpl4	62	90.393	Gasterosteus_aculeatus
ENSNBRG00000000112	-	78	89.163	ENSGAGG00000004526	RPL4	57	89.163	Gopherus_agassizii
ENSNBRG00000000112	-	61	77.987	ENSGGOG00000026797	-	59	78.125	Gorilla_gorilla
ENSNBRG00000000112	-	88	100.000	ENSHBUG00000012721	rpl4	62	100.000	Haplochromis_burtoni
ENSNBRG00000000112	-	77	78.607	ENSHGLG00000019179	-	50	78.607	Heterocephalus_glaber_female
ENSNBRG00000000112	-	77	75.622	ENSHGLG00000017848	-	70	74.627	Heterocephalus_glaber_female
ENSNBRG00000000112	-	77	72.637	ENSHGLG00100018267	-	71	72.637	Heterocephalus_glaber_male
ENSNBRG00000000112	-	77	77.612	ENSHGLG00100015244	-	50	77.612	Heterocephalus_glaber_male
ENSNBRG00000000112	-	80	89.952	ENSHCOG00000014929	rpl4	61	90.667	Hippocampus_comes
ENSNBRG00000000112	-	82	88.318	ENSIPUG00000021502	rpl4	57	88.208	Ictalurus_punctatus
ENSNBRG00000000112	-	78	81.773	ENSJJAG00000003088	-	51	81.773	Jaculus_jaculus
ENSNBRG00000000112	-	82	92.453	ENSKMAG00000019520	rpl4	62	91.703	Kryptolebias_marmoratus
ENSNBRG00000000112	-	80	94.203	ENSLBEG00000015490	rpl4	62	94.323	Labrus_bergylta
ENSNBRG00000000112	-	83	84.793	ENSLACG00000006259	RPL4	59	86.256	Latimeria_chalumnae
ENSNBRG00000000112	-	80	87.923	ENSLOCG00000013867	rpl4	57	88.208	Lepisosteus_oculatus
ENSNBRG00000000112	-	87	78.696	ENSLAFG00000006494	RPL4	50	86.700	Loxodonta_africana
ENSNBRG00000000112	-	78	78.218	ENSMFAG00000000187	-	67	77.833	Macaca_fascicularis
ENSNBRG00000000112	-	78	78.218	ENSMMUG00000023202	-	75	77.833	Macaca_mulatta
ENSNBRG00000000112	-	78	76.355	ENSMNEG00000045350	-	51	76.355	Macaca_nemestrina
ENSNBRG00000000112	-	78	76.733	ENSMNEG00000041360	-	67	76.355	Macaca_nemestrina
ENSNBRG00000000112	-	78	78.325	ENSMLEG00000038036	-	50	77.833	Mandrillus_leucophaeus
ENSNBRG00000000112	-	77	83.582	ENSMLEG00000039344	-	63	83.582	Mandrillus_leucophaeus
ENSNBRG00000000112	-	77	76.617	ENSMLEG00000000207	-	53	76.617	Mandrillus_leucophaeus
ENSNBRG00000000112	-	82	94.811	ENSMAMG00000006058	rpl4	62	93.450	Mastacembelus_armatus
ENSNBRG00000000112	-	88	100.000	ENSMZEG00005022644	rpl4	62	100.000	Maylandia_zebra
ENSNBRG00000000112	-	57	81.651	ENSMAUG00000009392	-	55	56.219	Mesocricetus_auratus
ENSNBRG00000000112	-	78	78.818	ENSMICG00000035358	-	66	78.818	Microcebus_murinus
ENSNBRG00000000112	-	88	92.576	ENSMMOG00000002856	rpl4	61	92.576	Mola_mola
ENSNBRG00000000112	-	80	81.159	ENSMALG00000007697	rpl4	62	79.130	Monopterus_albus
ENSNBRG00000000112	-	87	80.870	ENSMPUG00000000337	-	50	85.308	Mustela_putorius_furo
ENSNBRG00000000112	-	82	80.751	ENSMPUG00000015855	-	51	81.043	Mustela_putorius_furo
ENSNBRG00000000112	-	67	78.613	ENSMLUG00000026837	-	76	79.558	Myotis_lucifugus
ENSNBRG00000000112	-	78	83.168	ENSMLUG00000024130	-	65	82.759	Myotis_lucifugus
ENSNBRG00000000112	-	87	71.556	ENSNGAG00000003647	-	54	77.612	Nannospalax_galili
ENSNBRG00000000112	-	81	71.564	ENSNLEG00000034865	-	56	75.258	Nomascus_leucogenys
ENSNBRG00000000112	-	78	85.714	ENSNLEG00000011208	-	50	85.714	Nomascus_leucogenys
ENSNBRG00000000112	-	78	83.168	ENSMEUG00000003992	RPL4	57	83.168	Notamacropus_eugenii
ENSNBRG00000000112	-	85	82.589	ENSOPRG00000007792	RPL4	66	82.589	Ochotona_princeps
ENSNBRG00000000112	-	77	73.367	ENSODEG00000012486	-	51	73.367	Octodon_degus
ENSNBRG00000000112	-	85	80.995	ENSODEG00000016495	-	52	86.207	Octodon_degus
ENSNBRG00000000112	-	81	70.000	ENSODEG00000014131	-	65	73.171	Octodon_degus
ENSNBRG00000000112	-	83	68.722	ENSODEG00000018467	-	53	71.818	Octodon_degus
ENSNBRG00000000112	-	77	75.500	ENSODEG00000008514	-	62	75.500	Octodon_degus
ENSNBRG00000000112	-	88	99.127	ENSONIG00000015438	rpl4	62	99.127	Oreochromis_niloticus
ENSNBRG00000000112	-	78	87.192	ENSOCUG00000008794	RPL4	52	87.192	Oryctolagus_cuniculus
ENSNBRG00000000112	-	88	92.140	ENSORLG00000006882	rpl4	62	92.140	Oryzias_latipes
ENSNBRG00000000112	-	88	92.140	ENSORLG00020007732	rpl4	62	92.140	Oryzias_latipes_hni
ENSNBRG00000000112	-	88	92.140	ENSORLG00015021776	rpl4	62	92.140	Oryzias_latipes_hsok
ENSNBRG00000000112	-	82	93.868	ENSOMEG00000005867	-	57	93.868	Oryzias_melastigma
ENSNBRG00000000112	-	82	93.868	ENSOMEG00000021252	rpl4	57	93.868	Oryzias_melastigma
ENSNBRG00000000112	-	74	60.104	ENSOARG00000006052	-	95	60.104	Ovis_aries
ENSNBRG00000000112	-	78	72.772	ENSPPAG00000031024	-	72	72.772	Pan_paniscus
ENSNBRG00000000112	-	77	73.892	ENSPPAG00000033093	-	69	71.163	Pan_paniscus
ENSNBRG00000000112	-	82	84.977	ENSPPRG00000000610	-	50	85.308	Panthera_pardus
ENSNBRG00000000112	-	82	84.977	ENSPTIG00000010784	-	50	85.308	Panthera_tigris_altaica
ENSNBRG00000000112	-	78	72.772	ENSPTRG00000052702	-	72	72.772	Pan_troglodytes
ENSNBRG00000000112	-	75	77.320	ENSPTRG00000044817	-	59	77.320	Pan_troglodytes
ENSNBRG00000000112	-	78	77.723	ENSPANG00000006339	-	55	77.723	Papio_anubis
ENSNBRG00000000112	-	78	81.773	ENSPANG00000012606	-	50	81.773	Papio_anubis
ENSNBRG00000000112	-	83	87.963	ENSPKIG00000015644	rpl4	52	88.626	Paramormyrops_kingsleyae
ENSNBRG00000000112	-	83	85.648	ENSPSIG00000011400	RPL4	58	87.143	Pelodiscus_sinensis
ENSNBRG00000000112	-	88	89.474	ENSPMGG00000009930	rpl4	62	89.474	Periophthalmus_magnuspinnatus
ENSNBRG00000000112	-	82	93.868	ENSPFOG00000008365	rpl4	62	90.830	Poecilia_formosa
ENSNBRG00000000112	-	82	93.868	ENSPLAG00000014151	rpl4	62	90.830	Poecilia_latipinna
ENSNBRG00000000112	-	82	93.396	ENSPMEG00000012882	rpl4	62	90.393	Poecilia_mexicana
ENSNBRG00000000112	-	82	92.925	ENSPREG00000010449	rpl4	62	89.520	Poecilia_reticulata
ENSNBRG00000000112	-	72	79.032	ENSPCOG00000017340	-	51	79.032	Propithecus_coquereli
ENSNBRG00000000112	-	88	99.563	ENSPNYG00000014038	rpl4	62	99.563	Pundamilia_nyererei
ENSNBRG00000000112	-	80	84.541	ENSPNAG00000014698	rpl4	56	84.541	Pygocentrus_nattereri
ENSNBRG00000000112	-	78	86.700	ENSRBIG00000011853	-	52	86.700	Rhinopithecus_bieti
ENSNBRG00000000112	-	89	67.965	ENSRBIG00000032836	-	57	67.965	Rhinopithecus_bieti
ENSNBRG00000000112	-	77	76.617	ENSRBIG00000028221	-	53	76.617	Rhinopithecus_bieti
ENSNBRG00000000112	-	78	87.192	ENSRBIG00000043139	-	50	87.192	Rhinopithecus_bieti
ENSNBRG00000000112	-	78	82.353	ENSRBIG00000036624	-	52	82.353	Rhinopithecus_bieti
ENSNBRG00000000112	-	78	80.882	ENSRROG00000033501	-	69	80.882	Rhinopithecus_roxellana
ENSNBRG00000000112	-	77	76.119	ENSRROG00000031634	-	73	76.119	Rhinopithecus_roxellana
ENSNBRG00000000112	-	78	80.296	ENSRROG00000031930	-	51	79.310	Rhinopithecus_roxellana
ENSNBRG00000000112	-	92	66.935	ENSRROG00000027556	-	61	66.935	Rhinopithecus_roxellana
ENSNBRG00000000112	-	74	54.872	YDR012W	RPL4B	54	54.872	Saccharomyces_cerevisiae
ENSNBRG00000000112	-	74	54.872	YBR031W	RPL4A	54	54.872	Saccharomyces_cerevisiae
ENSNBRG00000000112	-	78	81.188	ENSSBOG00000021302	-	58	81.188	Saimiri_boliviensis_boliviensis
ENSNBRG00000000112	-	87	85.088	ENSSFOG00015024033	rpl4	54	87.736	Scleropages_formosus
ENSNBRG00000000112	-	88	95.197	ENSSMAG00000014547	rpl4	62	95.197	Scophthalmus_maximus
ENSNBRG00000000112	-	81	94.762	ENSSDUG00000009916	-	99	94.828	Seriola_dumerili
ENSNBRG00000000112	-	83	91.667	ENSSLDG00000008195	rpl4	99	92.050	Seriola_lalandi_dorsalis
ENSNBRG00000000112	-	82	95.283	ENSSPAG00000019006	rpl4	56	95.283	Stegastes_partitus
ENSNBRG00000000112	-	88	37.719	ENSSSCG00000034312	-	54	37.281	Sus_scrofa
ENSNBRG00000000112	-	87	79.565	ENSSSCG00000004945	-	53	83.886	Sus_scrofa
ENSNBRG00000000112	-	75	73.196	ENSSSCG00000034903	-	52	72.775	Sus_scrofa
ENSNBRG00000000112	-	78	88.670	ENSTGUG00000009403	RPL4	61	80.952	Taeniopygia_guttata
ENSNBRG00000000112	-	80	90.821	ENSTRUG00000014667	rpl4	62	89.520	Takifugu_rubripes
ENSNBRG00000000112	-	80	91.787	ENSTNIG00000008428	rpl4	62	90.393	Tetraodon_nigroviridis
ENSNBRG00000000112	-	87	80.435	ENSUAMG00000023236	RPL4	50	85.308	Ursus_americanus
ENSNBRG00000000112	-	82	84.038	ENSVPAG00000006746	RPL4	50	84.360	Vicugna_pacos
ENSNBRG00000000112	-	82	81.221	ENSVVUG00000010149	-	60	81.517	Vulpes_vulpes
ENSNBRG00000000112	-	78	76.847	ENSVVUG00000013973	-	64	76.847	Vulpes_vulpes
ENSNBRG00000000112	-	82	87.383	ENSXETG00000015898	rpl4	53	88.095	Xenopus_tropicalis
ENSNBRG00000000112	-	82	89.671	ENSXCOG00000000123	rpl4	56	89.623	Xiphophorus_couchianus
ENSNBRG00000000112	-	82	92.453	ENSXMAG00000029529	rpl4	62	89.520	Xiphophorus_maculatus