EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000146 (Gene tree)
Gene ID: 102784806
Gene Symbol: -
Alias: -
Full Name: nucleolin-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3651 bases
Position: chrAFNY01111202.1:21-3671
Accession: 102784806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000160	RRM_1	PF00076.22	3.5e-49	1	3
ENSNBRP00000000160	RRM_1	PF00076.22	3.5e-49	2	3
ENSNBRP00000000160	RRM_1	PF00076.22	3.5e-49	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000192	-	2210	XM_006810604	ENSNBRP00000000160	339 (aa)	XP_006810667	-

Gene Model

Click here to download ENSNBRG00000000146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000146's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000146	-	99	100.000	ENSNBRG00000001232	ncl	94	100.000
ENSNBRG00000000146	-	80	32.353	ENSNBRG00000003068	-	65	33.088
ENSNBRG00000000146	-	51	41.176	ENSNBRG00000022760	-	79	41.176
ENSNBRG00000000146	-	64	32.192	ENSNBRG00000016633	pabpc1l	65	32.877
ENSNBRG00000000146	-	80	32.941	ENSNBRG00000004605	dazap1	52	33.735
ENSNBRG00000000146	-	51	31.183	ENSNBRG00000000841	-	50	30.357

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000146	-	95	45.299	ENSATEG00000019862	-	67	44.172	Anabas_testudineus
ENSNBRG00000000146	-	86	80.142	ENSATEG00000013343	ncl	50	80.142	Anabas_testudineus
ENSNBRG00000000146	-	85	62.021	ENSAPLG00000012897	-	62	62.021	Anas_platyrhynchos
ENSNBRG00000000146	-	82	94.624	ENSACLG00000026031	ncl	76	94.624	Astatotilapia_calliptera
ENSNBRG00000000146	-	82	68.641	ENSAMXG00000001647	ncl	77	68.990	Astyanax_mexicanus
ENSNBRG00000000146	-	77	49.321	ENSCHIG00000003401	-	52	49.107	Capra_hircus
ENSNBRG00000000146	-	86	76.027	ENSCSEG00000015089	ncl	62	68.438	Cynoglossus_semilaevis
ENSNBRG00000000146	-	85	72.318	ENSDARG00000002710	ncl	73	72.085	Danio_rerio
ENSNBRG00000000146	-	88	43.667	ENSDNOG00000031611	-	62	44.643	Dasypus_novemcinctus
ENSNBRG00000000146	-	69	53.425	ENSDNOG00000040440	-	96	53.191	Dasypus_novemcinctus
ENSNBRG00000000146	-	86	50.508	ENSELUG00000022826	-	75	50.704	Esox_lucius
ENSNBRG00000000146	-	83	71.930	ENSELUG00000006033	ncl	51	71.154	Esox_lucius
ENSNBRG00000000146	-	86	78.014	ENSFHEG00000018000	ncl	61	76.596	Fundulus_heteroclitus
ENSNBRG00000000146	-	85	67.474	ENSGMOG00000001341	ncl	54	67.025	Gadus_morhua
ENSNBRG00000000146	-	90	76.206	ENSGACG00000008970	ncl	60	77.660	Gasterosteus_aculeatus
ENSNBRG00000000146	-	99	100.000	ENSHBUG00000006869	ncl	60	100.000	Haplochromis_burtoni
ENSNBRG00000000146	-	86	78.893	ENSHCOG00000010234	ncl	53	77.855	Hippocampus_comes
ENSNBRG00000000146	-	82	70.463	ENSIPUG00000024556	ncl	72	70.819	Ictalurus_punctatus
ENSNBRG00000000146	-	86	81.560	ENSLBEG00000019073	ncl	55	81.560	Labrus_bergylta
ENSNBRG00000000146	-	86	44.295	ENSLBEG00000014278	-	66	43.003	Labrus_bergylta
ENSNBRG00000000146	-	88	54.153	ENSLACG00000022167	-	60	54.804	Latimeria_chalumnae
ENSNBRG00000000146	-	82	66.667	ENSLACG00000009328	ncl	53	65.505	Latimeria_chalumnae
ENSNBRG00000000146	-	99	98.512	ENSMZEG00005017438	ncl	60	98.512	Maylandia_zebra
ENSNBRG00000000146	-	85	62.021	ENSMGAG00000008147	-	80	64.602	Meleagris_gallopavo
ENSNBRG00000000146	-	84	80.208	ENSMMOG00000008553	ncl	77	81.597	Mola_mola
ENSNBRG00000000146	-	89	81.783	ENSMALG00000014827	ncl	51	81.783	Monopterus_albus
ENSNBRG00000000146	-	84	43.154	ENSMPUG00000001663	-	57	43.154	Mustela_putorius_furo
ENSNBRG00000000146	-	86	61.210	ENSMEUG00000012335	-	50	60.777	Notamacropus_eugenii
ENSNBRG00000000146	-	83	36.237	ENSONIG00000010631	-	71	36.396	Oreochromis_niloticus
ENSNBRG00000000146	-	99	100.000	ENSONIG00000012508	ncl	60	100.000	Oreochromis_niloticus
ENSNBRG00000000146	-	99	58.769	ENSOANG00000008732	-	56	62.021	Ornithorhynchus_anatinus
ENSNBRG00000000146	-	87	39.799	ENSORLG00000004645	-	61	40.989	Oryzias_latipes
ENSNBRG00000000146	-	85	78.369	ENSORLG00000007055	ncl	53	78.723	Oryzias_latipes
ENSNBRG00000000146	-	84	40.000	ENSORLG00020003497	-	55	40.636	Oryzias_latipes_hni
ENSNBRG00000000146	-	84	40.753	ENSORLG00015006613	-	57	41.343	Oryzias_latipes_hsok
ENSNBRG00000000146	-	84	76.736	ENSORLG00015013815	ncl	86	78.472	Oryzias_latipes_hsok
ENSNBRG00000000146	-	87	39.216	ENSOMEG00000015864	-	62	39.792	Oryzias_melastigma
ENSNBRG00000000146	-	86	72.632	ENSPKIG00000002604	ncl	52	72.792	Paramormyrops_kingsleyae
ENSNBRG00000000146	-	87	63.668	ENSPSIG00000002361	-	50	63.542	Pelodiscus_sinensis
ENSNBRG00000000146	-	97	70.303	ENSPMGG00000004709	ncl	85	70.427	Periophthalmus_magnuspinnatus
ENSNBRG00000000146	-	99	98.806	ENSPNYG00000020494	ncl	60	98.806	Pundamilia_nyererei
ENSNBRG00000000146	-	86	55.319	ENSSHAG00000002702	-	57	51.703	Sarcophilus_harrisii
ENSNBRG00000000146	-	97	43.114	ENSSFOG00015013153	-	69	46.043	Scleropages_formosus
ENSNBRG00000000146	-	86	74.035	ENSSFOG00015008583	ncl	57	74.205	Scleropages_formosus
ENSNBRG00000000146	-	86	79.725	ENSSMAG00000021241	ncl	54	79.725	Scophthalmus_maximus
ENSNBRG00000000146	-	86	81.597	ENSSDUG00000006128	ncl	85	81.597	Seriola_dumerili
ENSNBRG00000000146	-	87	44.554	ENSSDUG00000010922	-	50	46.125	Seriola_dumerili
ENSNBRG00000000146	-	86	80.851	ENSSLDG00000002012	ncl	52	80.851	Seriola_lalandi_dorsalis
ENSNBRG00000000146	-	92	42.553	ENSSLDG00000015784	-	53	44.156	Seriola_lalandi_dorsalis
ENSNBRG00000000146	-	82	80.142	ENSSPAG00000002637	ncl	79	80.142	Stegastes_partitus
ENSNBRG00000000146	-	86	76.950	ENSTRUG00000008185	ncl	52	77.431	Takifugu_rubripes
ENSNBRG00000000146	-	88	37.864	ENSXCOG00000007369	-	69	39.041	Xiphophorus_couchianus
ENSNBRG00000000146	-	86	58.681	ENSXCOG00000003524	ncl	84	58.681	Xiphophorus_couchianus