EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000000447 (Gene tree)
Gene ID: -
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain-containing protein 3%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4958 bases
Position: chrJH422275.1:15851123-15856080
Accession: 102784107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000538	PPR	PF01535.20	8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000577	-	1620	XM_006781895	ENSNBRP00000000538	540 (aa)	XP_006781958	-

Gene Model

Click here to download ENSNBRG00000000447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000447	ptcd3	100	85.789	ENSACIG00000022263	ptcd3	99	85.789	Amphilophus_citrinellus
ENSNBRG00000000447	ptcd3	100	73.658	ENSAOCG00000017186	ptcd3	88	73.658	Amphiprion_ocellaris
ENSNBRG00000000447	ptcd3	100	73.826	ENSAPEG00000016069	ptcd3	88	73.826	Amphiprion_percula
ENSNBRG00000000447	ptcd3	96	44.674	ENSAPLG00000005086	PTCD3	96	44.674	Anas_platyrhynchos
ENSNBRG00000000447	ptcd3	100	88.945	ENSACLG00000020653	ptcd3	90	88.945	Astatotilapia_calliptera
ENSNBRG00000000447	ptcd3	100	57.647	ENSAMXG00000011570	ptcd3	90	57.647	Astyanax_mexicanus
ENSNBRG00000000447	ptcd3	100	73.993	ENSCVAG00000020820	ptcd3	96	74.024	Cyprinodon_variegatus
ENSNBRG00000000447	ptcd3	94	69.892	ENSGAFG00000015291	ptcd3	94	69.892	Gambusia_affinis
ENSNBRG00000000447	ptcd3	100	89.112	ENSHBUG00000020056	ptcd3	94	89.153	Haplochromis_burtoni
ENSNBRG00000000447	ptcd3	100	71.739	ENSLBEG00000015349	ptcd3	90	71.739	Labrus_bergylta
ENSNBRG00000000447	ptcd3	100	89.112	ENSMZEG00005004980	ptcd3	90	89.112	Maylandia_zebra
ENSNBRG00000000447	ptcd3	100	43.140	ENSMGAG00000013124	PTCD3	96	43.140	Meleagris_gallopavo
ENSNBRG00000000447	ptcd3	100	70.167	ENSMALG00000013282	ptcd3	90	70.167	Monopterus_albus
ENSNBRG00000000447	ptcd3	100	87.940	ENSONIG00000015886	ptcd3	94	87.458	Oreochromis_niloticus
ENSNBRG00000000447	ptcd3	100	74.329	ENSORLG00000008776	ptcd3	92	74.329	Oryzias_latipes
ENSNBRG00000000447	ptcd3	100	74.329	ENSORLG00020020676	ptcd3	89	74.329	Oryzias_latipes_hni
ENSNBRG00000000447	ptcd3	96	63.194	ENSORLG00015015978	ptcd3	99	63.194	Oryzias_latipes_hsok
ENSNBRG00000000447	ptcd3	100	72.373	ENSPFOG00000004442	ptcd3	94	72.373	Poecilia_formosa
ENSNBRG00000000447	ptcd3	90	69.877	ENSPLAG00000021401	ptcd3	91	69.877	Poecilia_latipinna
ENSNBRG00000000447	ptcd3	98	68.977	ENSPMEG00000007153	ptcd3	100	73.964	Poecilia_mexicana
ENSNBRG00000000447	ptcd3	100	53.105	ENSSFOG00015019643	ptcd3	95	53.156	Scleropages_formosus
ENSNBRG00000000447	ptcd3	88	49.064	ENSTGUG00000010760	PTCD3	99	49.064	Taeniopygia_guttata
ENSNBRG00000000447	ptcd3	100	63.606	ENSTRUG00000003939	ptcd3	91	63.606	Takifugu_rubripes